FFCP PHASE1:Hg19::chr5:125758779..125758805,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=65983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24911|TSSclassifier=S|UniProt=Q96HH9,E9PD09|association_with_transcript=-32bp_to_ENST00000285689,ENST00000515200_5end|description=CAGE_peak_8_at_GRAMD3_5end|id=chr5:125758779..125758805,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000197;7.08e-07;6!CL:0000098;7.08e-07;6!CL:0002167;7.08e-07;6|ontology_enrichment_celltype_v019_2=CL:0000197,8.29e-07,6;CL:0000098,8.29e-07,6;CL:0002167,8.29e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.83e-15!57;UBERON:0005068!9.83e-15!57;UBERON:0006241!9.83e-15!57;UBERON:0007135!9.83e-15!57;UBERON:0002616!7.56e-14!59;UBERON:0007023!6.84e-12!115;UBERON:0000955!3.83e-11!69;UBERON:0006238!3.83e-11!69;UBERON:0003080!4.39e-11!42;UBERON:0002780!7.30e-11!41;UBERON:0001890!7.30e-11!41;UBERON:0006240!7.30e-11!41;UBERON:0001017!2.82e-09!82;UBERON:0005743!3.90e-09!86;UBERON:0003075!1.12e-08!86;UBERON:0007284!1.12e-08!86;UBERON:0001893!2.62e-08!34;UBERON:0002020!2.75e-08!34;UBERON:0003528!2.75e-08!34;UBERON:0000073!2.78e-08!94;UBERON:0001016!2.78e-08!94;UBERON:0002791!7.08e-08!33;UBERON:0002346!1.88e-07!90;UBERON:0001869!2.90e-07!32|ontology_enrichment_uberon_v019=UBERON:0002420;2.44e-12;9!UBERON:0007245;2.44e-12;9!UBERON:0010009;2.44e-12;9!UBERON:0010011;2.44e-12;9!UBERON:0000454;2.44e-12;9!UBERON:0000125;5.92e-12;9!UBERON:0002308;5.92e-12;9!UBERON:0000073;6.65e-12;53!UBERON:0002616;6.65e-12;53!UBERON:0002780;3.58e-10;41!UBERON:0001890;3.58e-10;41!UBERON:0001893;5.18e-10;34!UBERON:0003528;9.29e-10;34!UBERON:0002020;9.29e-10;34!UBERON:0009663;1.16e-09;7!UBERON:0002791;1.49e-08;32!UBERON:0002298;1.58e-08;6!UBERON:0004457;1.80e-08;9!UBERON:0000042;1.80e-08;9!UBERON:0001869;2.06e-08;32!UBERON:0004732;7.56e-08;13!UBERON:0003688;1.95e-07;6!UBERON:0002358;1.95e-07;6!UBERON:0003684;1.95e-07;6!UBERON:0001178;1.95e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.73e-23,56;UBERON:0005068,9.73e-23,56;UBERON:0006241,9.73e-23,56;UBERON:0007135,9.73e-23,56;UBERON:0000073,3.15e-21,53;UBERON:0002616,3.15e-21,53;UBERON:0002780,1.73e-15,41;UBERON:0001890,1.73e-15,41;UBERON:0003080,1.73e-15,41;UBERON:0006240,1.73e-15,41;UBERON:0000955,4.12e-15,68;UBERON:0006238,4.12e-15,68;UBERON:0003075,3.24e-14,82;UBERON:0007284,3.24e-14,82;UBERON:0010371,8.10e-14,104;UBERON:0001017,3.62e-13,81;UBERON:0002346,4.62e-13,86;UBERON:0002420,2.33e-12,9;UBERON:0007245,2.33e-12,9;UBERON:0010009,2.33e-12,9;UBERON:0010011,2.33e-12,9;UBERON:0000454,2.33e-12,9;UBERON:0000125,5.21e-12,9;UBERON:0002308,5.21e-12,9;UBERON:0001893,5.58e-12,34;UBERON:0003528,6.13e-12,34;UBERON:0002020,6.13e-12,34;UBERON:0001016,7.94e-12,89;UBERON:0007023,9.03e-11,114;UBERON:0002791,4.05e-10,32;UBERON:0003056,5.25e-10,61;UBERON:0001869,5.85e-10,32;UBERON:0009663,1.51e-09,7;UBERON:0002298,5.46e-09,6;UBERON:0003076,1.32e-08,15;UBERON:0003057,1.32e-08,15;UBERON:0004732,2.34e-08,13;UBERON:0010314,5.96e-08,132;UBERON:0003688,2.33e-07,6;UBERON:0002358,2.33e-07,6;UBERON:0003684,2.33e-07,6;UBERON:0001178,2.33e-07,6;UBERON:0004733,3.70e-07,12;UBERON:0002028,3.70e-07,12;UBERON:0007277,3.70e-07,12|phase1_expression=5.26867299884614,4.49611100171065,3.94672331468719,2.00146596706261,0.446961094427288,2.61701557230111,2.53299878168311,0,0.783556884599516,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0,0.487932798790507,0.369363174230364,0,0.313454721478088,0.286235987131057,0,0.502170558379211,0.0764134057479513,0.0821005894499457,0.472264687882075,0,0.767658796194425,0.77408061658038,0.919421224478927,0,1.10926203050036,0,0,0,2.21598163412751,1.40381113229099,1.08505435357926,0.447830948479849,0.32389366601898,1.03030227053675,0.581592955118259,0.755751887377619,0,0.697287110717054,0.411167888021826,0.619412741790207,1.43846196161075,0.768482119587302,0.709446689665756,1.03423704220986,1.93645405075148,0,0,0.272906150057846,0.224723484445085,1.83650335422542,0.320929027076094,2.55734850319616,0.329851300186716,0,0.426224750532694,5.80418477257168,1.70215567407342,1.86846674698672,1.00499466102697,0.521482918420201,0.217188844705117,3.02699751316684,1.84138817993782,1.58231193720442,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0,0.32145117339416,0.285012743741249,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,0.786021525498329,0.411202997999018,1.33749196312542,2.60737813306872,1.4203434172042,3.89653456815823,2.00538822393312,1.17842362989935,1.99380505125259,2.43723477388514,0.640456598628376,0.780356085359269,0.657751618414705,0,1.15921234294021,2.52087157375503,2.1403266247177,2.09071047609954,0.679856056185397,1.14966148080576,0.68725489096526,1.01207876807801,0.95569624297229,0.651083453856419,0.950452044448374,0.752875595388864,0.7679196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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=S | |||
|UniProt=Q96HH9,E9PD09 | |||
|association_with_transcript=-32bp_to_ENST00000285689,ENST00000515200_5end | |||
|description=CAGE_peak_8_at_GRAMD3_5end | |||
|id=chr5:125758779..125758805,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;7.08e-07;6!CL:0000098;7.08e-07;6!CL:0002167;7.08e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.29e-07,6;CL:0000098,8.29e-07,6;CL:0002167,8.29e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p8@GRAMD3 | |||
}} |
Revision as of 12:56, 13 September 2013
Short description: | p8@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_GRAMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000285689, ENST00000515200_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | Q96HH9E9PD09 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.29e-07 | 6 |
sensory epithelial cell | 8.29e-07 | 6 |
olfactory epithelial cell | 8.29e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.