FFCP PHASE1:Hg19::chr5:120649811..120649848,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1695|description=CAGE_peak_at_chr5:120649811..120649848,+|id=chr5:120649811..120649848,+|ontology_enrichment_celltype=CL:0002543!1.04e-13!6;CL:0002592!2.54e-12!3;CL:0000071!8.29e-12!18;CL:0002546!8.29e-12!18;CL:0000319!1.25e-09!1;CL:0000569!3.58e-09!4;CL:0000011!3.58e-09!4;CL:0002139!8.27e-09!24;CL:0002494!1.44e-08!16;CL:0000222!8.08e-07!119|ontology_enrichment_celltype_v019=CL:0002543;1.83e-98;6!CL:0000071;8.86e-34;18!CL:0002139;1.16e-25;24!CL:0000115;2.37e-15;36!CL:0002078;3.12e-11;45!CL:0000213;6.70e-10;58!CL:0000215;6.70e-10;58!CL:0000076;8.17e-09;63|ontology_enrichment_celltype_v019_2=CL:0002543,1.83e-98,6;CL:0000071,8.86e-34,18;CL:0002546,8.86e-34,18;CL:0002139,1.16e-25,24;CL:0000115,1.62e-17,36;CL:0002078,3.03e-14,45;CL:0000213,2.67e-11,58;CL:0000215,2.67e-11,58;CL:0000076,1.74e-10,63|ontology_enrichment_development_v019=CL:0002546;8.86e-34;18|ontology_enrichment_disease=DOID:3030!1.25e-09!1;DOID:225!1.48e-09!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001981!2.16e-15!60;UBERON:0007500!2.16e-15!60;UBERON:0004537!2.16e-15!60;UBERON:0006965!2.16e-15!60;UBERON:0004872!8.48e-15!84;UBERON:0000055!3.81e-13!69;UBERON:0001621!2.54e-12!3;UBERON:0004573!6.51e-12!33;UBERON:0004571!6.51e-12!33;UBERON:0001637!7.04e-12!42;UBERON:0003509!7.04e-12!42;UBERON:0004572!7.04e-12!42;UBERON:0001986!8.29e-12!18;UBERON:0004638!8.29e-12!18;UBERON:0004852!8.29e-12!18;UBERON:0002049!2.99e-11!79;UBERON:0007798!2.99e-11!79;UBERON:0004535!9.20e-11!110;UBERON:0001009!2.04e-10!113;UBERON:0003914!7.04e-10!118;UBERON:0005705!8.17e-10!1;UBERON:0008193!8.17e-10!1;UBERON:0002514!8.17e-10!1;UBERON:0003462!8.17e-10!1;UBERON:0008001!8.17e-10!1;UBERON:0007914!8.17e-10!1;UBERON:0003457!8.17e-10!1;UBERON:0009292!8.17e-10!1;UBERON:0007375!8.17e-10!1;UBERON:0003323!8.17e-10!1;UBERON:0002397!8.17e-10!1;UBERON:0001709!8.17e-10!1;UBERON:0004066!8.17e-10!1;UBERON:0002244!8.17e-10!1;UBERON:0005620!8.17e-10!1;UBERON:0004068!8.17e-10!1;UBERON:0004362!8.17e-10!1;UBERON:0000487!1.25e-09!22;UBERON:0001638!2.62e-09!9;UBERON:0003920!2.62e-09!9;UBERON:0004582!2.62e-09!9;UBERON:0006914!1.90e-08!25;UBERON:0003498!9.76e-08!5;UBERON:0005985!9.76e-08!5;UBERON:0000025!4.79e-07!194|ontology_enrichment_uberon_v019=UBERON:0001638;3.75e-66;9!UBERON:0003920;3.75e-66;9!UBERON:0004582;3.75e-66;9!UBERON:0004638;8.86e-34;18!UBERON:0001986;8.86e-34;18!UBERON:0004852;8.86e-34;18!UBERON:0000487;7.08e-28;22!UBERON:0006914;1.10e-24;25!UBERON:0000490;1.30e-18;33!UBERON:0001009;2.52e-07;112!UBERON:0000025;4.79e-07;93!UBERON:0007500;7.38e-07;56!UBERON:0001981;7.38e-07;56!UBERON:0004537;7.38e-07;56|ontology_enrichment_uberon_v019_2=UBERON:0001638,3.75e-66,9;UBERON:0003920,3.75e-66,9;UBERON:0004582,3.75e-66,9;UBERON:0004638,8.86e-34,18;UBERON:0001986,8.86e-34,18;UBERON:0004852,8.86e-34,18;UBERON:0000487,7.08e-28,22;UBERON:0006914,1.10e-24,25;UBERON:0007500,3.99e-11,59;UBERON:0001981,3.99e-11,59;UBERON:0004537,3.99e-11,59;UBERON:0006965,3.99e-11,59;UBERON:0000055,8.58e-10,68;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0004872,3.31e-08,83|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,9.19899824795299,3.79706263827252,1.64881569537367,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1695 | |||
|description=CAGE_peak_at_chr5:120649811..120649848,+ | |||
|id=chr5:120649811..120649848,+ | |||
|ontology_enrichment_celltype=CL:0002543!1.04e-13!6;CL:0002592!2.54e-12!3;CL:0000071!8.29e-12!18;CL:0002546!8.29e-12!18;CL:0000319!1.25e-09!1;CL:0000569!3.58e-09!4;CL:0000011!3.58e-09!4;CL:0002139!8.27e-09!24;CL:0002494!1.44e-08!16;CL:0000222!8.08e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002543;1.83e-98;6!CL:0000071;8.86e-34;18!CL:0002139;1.16e-25;24!CL:0000115;2.37e-15;36!CL:0002078;3.12e-11;45!CL:0000213;6.70e-10;58!CL:0000215;6.70e-10;58!CL:0000076;8.17e-09;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.83e-98,6;CL:0000071,8.86e-34,18;CL:0002546,8.86e-34,18;CL:0002139,1.16e-25,24;CL:0000115,1.62e-17,36;CL:0002078,3.03e-14,45;CL:0000213,2.67e-11,58;CL:0000215,2.67e-11,58;CL:0000076,1.74e-10,63 | |||
|ontology_enrichment_development_v019=CL:0002546;8.86e-34;18 | |||
|ontology_enrichment_disease=DOID:3030!1.25e-09!1;DOID:225!1.48e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!2.16e-15!60;UBERON:0007500!2.16e-15!60;UBERON:0004537!2.16e-15!60;UBERON:0006965!2.16e-15!60;UBERON:0004872!8.48e-15!84;UBERON:0000055!3.81e-13!69;UBERON:0001621!2.54e-12!3;UBERON:0004573!6.51e-12!33;UBERON:0004571!6.51e-12!33;UBERON:0001637!7.04e-12!42;UBERON:0003509!7.04e-12!42;UBERON:0004572!7.04e-12!42;UBERON:0001986!8.29e-12!18;UBERON:0004638!8.29e-12!18;UBERON:0004852!8.29e-12!18;UBERON:0002049!2.99e-11!79;UBERON:0007798!2.99e-11!79;UBERON:0004535!9.20e-11!110;UBERON:0001009!2.04e-10!113;UBERON:0003914!7.04e-10!118;UBERON:0005705!8.17e-10!1;UBERON:0008193!8.17e-10!1;UBERON:0002514!8.17e-10!1;UBERON:0003462!8.17e-10!1;UBERON:0008001!8.17e-10!1;UBERON:0007914!8.17e-10!1;UBERON:0003457!8.17e-10!1;UBERON:0009292!8.17e-10!1;UBERON:0007375!8.17e-10!1;UBERON:0003323!8.17e-10!1;UBERON:0002397!8.17e-10!1;UBERON:0001709!8.17e-10!1;UBERON:0004066!8.17e-10!1;UBERON:0002244!8.17e-10!1;UBERON:0005620!8.17e-10!1;UBERON:0004068!8.17e-10!1;UBERON:0004362!8.17e-10!1;UBERON:0000487!1.25e-09!22;UBERON:0001638!2.62e-09!9;UBERON:0003920!2.62e-09!9;UBERON:0004582!2.62e-09!9;UBERON:0006914!1.90e-08!25;UBERON:0003498!9.76e-08!5;UBERON:0005985!9.76e-08!5;UBERON:0000025!4.79e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;3.75e-66;9!UBERON:0003920;3.75e-66;9!UBERON:0004582;3.75e-66;9!UBERON:0004638;8.86e-34;18!UBERON:0001986;8.86e-34;18!UBERON:0004852;8.86e-34;18!UBERON:0000487;7.08e-28;22!UBERON:0006914;1.10e-24;25!UBERON:0000490;1.30e-18;33!UBERON:0001009;2.52e-07;112!UBERON:0000025;4.79e-07;93!UBERON:0007500;7.38e-07;56!UBERON:0001981;7.38e-07;56!UBERON:0004537;7.38e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,3.75e-66,9;UBERON:0003920,3.75e-66,9;UBERON:0004582,3.75e-66,9;UBERON:0004638,8.86e-34,18;UBERON:0001986,8.86e-34,18;UBERON:0004852,8.86e-34,18;UBERON:0000487,7.08e-28,22;UBERON:0006914,1.10e-24,25;UBERON:0007500,3.99e-11,59;UBERON:0001981,3.99e-11,59;UBERON:0004537,3.99e-11,59;UBERON:0006965,3.99e-11,59;UBERON:0000055,8.58e-10,68;UBERON:0002049,1.14e-08,78;UBERON:0007798,1.14e-08,78;UBERON:0004872,3.31e-08,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,9.19899824795299,3.79706263827252,1.64881569537367,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:120649811..120649848,+ | |||
}} |
Revision as of 12:51, 13 September 2013
Short description: | p@chr5:120649811..120649848, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:120649811..120649848, + |
Coexpression cluster: | C1695_Endothelial_Renal_Smooth_Hepatic_Natural_Eosinophils_mesodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.83e-98 | 6 |
blood vessel endothelial cell | 8.86e-34 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.86e-34 | 18 |
endothelial cell of vascular tree | 1.16e-25 | 24 |
endothelial cell | 1.62e-17 | 36 |
meso-epithelial cell | 3.03e-14 | 45 |
lining cell | 2.67e-11 | 58 |
barrier cell | 2.67e-11 | 58 |
squamous epithelial cell | 1.74e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
vein | 3.75e-66 | 9 |
venous blood vessel | 3.75e-66 | 9 |
venous system | 3.75e-66 | 9 |
blood vessel endothelium | 8.86e-34 | 18 |
endothelium | 8.86e-34 | 18 |
cardiovascular system endothelium | 8.86e-34 | 18 |
simple squamous epithelium | 7.08e-28 | 22 |
squamous epithelium | 1.10e-24 | 25 |
epithelial tube open at both ends | 3.99e-11 | 59 |
blood vessel | 3.99e-11 | 59 |
blood vasculature | 3.99e-11 | 59 |
vascular cord | 3.99e-11 | 59 |
vessel | 8.58e-10 | 68 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |
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