FFCP PHASE1:Hg19::chr5:115910475..115910491,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57556|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10738|TSSclassifier=S|UniProt=Q9H2E6|association_with_transcript=59bp_to_NM_020796,uc003krx.3,uc010jck.2_5end|coexpression_cluster_id=C2800|description=CAGE_peak_3_at_SEMA6A_5end|id=chr5:115910475..115910491,-|ontology_enrichment_celltype=CL:0000148!3.77e-08!10;CL:0000541!3.77e-08!10|ontology_enrichment_celltype_v019=CL:0000148;2.77e-10;10|ontology_enrichment_celltype_v019_2=CL:0000148,2.80e-10,10;CL:0000541,2.80e-10,10;CL:0000047,8.08e-08,8|ontology_enrichment_development_v019=UBERON:0006601;5.49e-11;82!UBERON:0009117;9.06e-07;10!UBERON:0005564;9.06e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.18e-41!115;UBERON:0001017!6.89e-35!82;UBERON:0001049!2.17e-33!57;UBERON:0005068!2.17e-33!57;UBERON:0006241!2.17e-33!57;UBERON:0007135!2.17e-33!57;UBERON:0005743!8.80e-33!86;UBERON:0000073!1.98e-32!94;UBERON:0001016!1.98e-32!94;UBERON:0002616!1.05e-27!59;UBERON:0000955!5.19e-27!69;UBERON:0006238!5.19e-27!69;UBERON:0003080!2.26e-25!42;UBERON:0002346!2.55e-25!90;UBERON:0002780!8.37e-25!41;UBERON:0001890!8.37e-25!41;UBERON:0006240!8.37e-25!41;UBERON:0003075!4.09e-24!86;UBERON:0007284!4.09e-24!86;UBERON:0002020!3.85e-22!34;UBERON:0003528!3.85e-22!34;UBERON:0001893!5.73e-22!34;UBERON:0002791!1.99e-21!33;UBERON:0000924!8.67e-21!173;UBERON:0006601!8.67e-21!173;UBERON:0001869!1.93e-20!32;UBERON:0004121!1.14e-19!169;UBERON:0003056!1.69e-17!61;UBERON:0000153!3.74e-17!129;UBERON:0007811!3.74e-17!129;UBERON:0000033!1.02e-16!123;UBERON:0000956!3.17e-16!25;UBERON:0000203!3.17e-16!25;UBERON:0002619!3.52e-15!22;UBERON:0001950!6.17e-14!20;UBERON:0004111!2.65e-13!241;UBERON:0000025!2.27e-12!194;UBERON:0000477!4.05e-11!286;UBERON:0000481!2.82e-09!347;UBERON:0000483!3.77e-09!309;UBERON:0000119!3.91e-09!312;UBERON:0003076!4.51e-09!15;UBERON:0003057!4.51e-09!15;UBERON:0000468!9.79e-09!659;UBERON:0000922!1.14e-08!612;UBERON:0000064!1.58e-08!219;UBERON:0000062!8.53e-08!511;UBERON:0004732!1.16e-07!13;UBERON:0002308!2.19e-07!9;UBERON:0000125!2.19e-07!9;UBERON:0002420!5.24e-07!9;UBERON:0007245!5.24e-07!9;UBERON:0010009!5.24e-07!9;UBERON:0010011!5.24e-07!9;UBERON:0000454!5.24e-07!9;UBERON:0002298!6.66e-07!8;UBERON:0004733!6.89e-07!12;UBERON:0002028!6.89e-07!12;UBERON:0007277!6.89e-07!12;UBERON:0000480!9.08e-07!626|ontology_enrichment_uberon_v019=UBERON:0003528;1.44e-24;34!UBERON:0002020;1.44e-24;34!UBERON:0001893;2.07e-24;34!UBERON:0002791;2.13e-24;32!UBERON:0001869;3.63e-24;32!UBERON:0002780;1.35e-23;41!UBERON:0001890;1.35e-23;41!UBERON:0000073;1.19e-22;53!UBERON:0002616;1.19e-22;53!UBERON:0000956;6.03e-21;25!UBERON:0000203;6.03e-21;25!UBERON:0002619;1.40e-19;22!UBERON:0001950;6.33e-18;20!UBERON:0007023;5.75e-15;114!UBERON:0000955;1.24e-14;68!UBERON:0001017;2.35e-14;75!UBERON:0001016;1.35e-13;83!UBERON:0000922;2.63e-13;49!UBERON:0004732;5.79e-10;13!UBERON:0000125;2.69e-09;9!UBERON:0002308;2.69e-09;9!UBERON:0004733;6.17e-09;12!UBERON:0002028;6.17e-09;12!UBERON:0002420;9.33e-09;9!UBERON:0007245;9.33e-09;9!UBERON:0010009;9.33e-09;9!UBERON:0010011;9.33e-09;9!UBERON:0000454;9.33e-09;9!UBERON:0009663;2.16e-07;7!UBERON:0011216;5.92e-07;132!UBERON:0001871;6.46e-07;6!UBERON:0002298;6.56e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.63e-53,114;UBERON:0001049,1.59e-43,56;UBERON:0005068,1.59e-43,56;UBERON:0006241,1.59e-43,56;UBERON:0007135,1.59e-43,56;UBERON:0001017,5.25e-41,81;UBERON:0000073,2.20e-40,53;UBERON:0002616,2.20e-40,53;UBERON:0001016,1.89e-39,89;UBERON:0002780,1.28e-32,41;UBERON:0001890,1.28e-32,41;UBERON:0003080,1.28e-32,41;UBERON:0006240,1.28e-32,41;UBERON:0003075,5.90e-32,82;UBERON:0007284,5.90e-32,82;UBERON:0002346,9.34e-32,86;UBERON:0000955,7.74e-31,68;UBERON:0006238,7.74e-31,68;UBERON:0011216,6.01e-29,223;UBERON:0003528,8.38e-29,34;UBERON:0002020,8.38e-29,34;UBERON:0001893,1.42e-28,34;UBERON:0002791,7.23e-27,32;UBERON:0001869,1.50e-26,32;UBERON:0010371,2.35e-25,104;UBERON:0004121,1.54e-22,171;UBERON:0000924,1.54e-22,171;UBERON:0006601,1.54e-22,171;UBERON:0003056,2.66e-22,61;UBERON:0000956,5.81e-21,25;UBERON:0000203,5.81e-21,25;UBERON:0002619,1.41e-19,22;UBERON:0001950,6.26e-18,20;UBERON:0010314,1.93e-17,132;UBERON:0000025,3.24e-12,192;UBERON:0003076,9.15e-12,15;UBERON:0003057,9.15e-12,15;UBERON:0004111,2.52e-11,240;UBERON:0004732,6.78e-10,13;UBERON:0000125,2.85e-09,9;UBERON:0002308,2.85e-09,9;UBERON:0004733,7.19e-09,12;UBERON:0002028,7.19e-09,12;UBERON:0007277,7.19e-09,12;UBERON:0002420,9.02e-09,9;UBERON:0007245,9.02e-09,9;UBERON:0010009,9.02e-09,9;UBERON:0010011,9.02e-09,9;UBERON:0000454,9.02e-09,9;UBERON:0000922,2.19e-07,592;UBERON:0009663,2.22e-07,7;UBERON:0001871,5.98e-07,6;UBERON:0002298,6.62e-07,6;UBERON:0000483,9.24e-07,306|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,1.35433163884467,0,3.44800193625897,2.57612388417951,4.51685602740518,3.51519390865448,4.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57556 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10738 | |||
|TSSclassifier=S | |||
|UniProt=Q9H2E6 | |||
|association_with_transcript=59bp_to_NM_020796,uc003krx.3,uc010jck.2_5end | |||
|coexpression_cluster_id=C2800 | |||
|description=CAGE_peak_3_at_SEMA6A_5end | |||
|id=chr5:115910475..115910491,- | |||
|ontology_enrichment_celltype=CL:0000148!3.77e-08!10;CL:0000541!3.77e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.77e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.80e-10,10;CL:0000541,2.80e-10,10;CL:0000047,8.08e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.49e-11;82!UBERON:0009117;9.06e-07;10!UBERON:0005564;9.06e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@SEMA6A | |||
}} |
Revision as of 12:46, 13 September 2013
Short description: | p3@SEMA6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SEMA6A_5end |
Coexpression cluster: | C2800_pineal_teratocarcinoma_hepatoblastoma_optic_testicular_spinal_H9 |
Association with transcript: | 59bp_to_NM_020796, uc003krx.3, uc010jck.2_5end |
EntrezGene: | SEMA6A |
HGNC: | 10738 |
UniProt: | Q9H2E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.80e-10 | 10 |
melanoblast | 2.80e-10 | 10 |
neuronal stem cell | 8.08e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.