FFCP PHASE1:Mm9::chr16:45225058..45225071,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=576|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:45225058..45225071,+|id=chr16:45225058..45225071,+|ontology_enrichment_celltype=CL:0000791!6.76e-20!9;CL:0000789!6.76e-20!9;CL:0002420!6.76e-20!9;CL:0002419!6.76e-20!9;CL:0000790!6.76e-20!9;CL:0000838!1.31e-18!12;CL:0002031!1.13e-17!25;CL:0000988!1.38e-17!32;CL:0002032!1.38e-17!32;CL:0000037!1.38e-17!32;CL:0000566!1.38e-17!32;CL:0000837!1.38e-17!32;CL:0000624!2.31e-17!8;CL:0000542!4.80e-17!13;CL:0000051!4.80e-17!13;CL:0000084!4.98e-16!11;CL:0000827!4.98e-16!11;CL:0000738!1.24e-12!17;CL:0002087!1.24e-12!17;CL:0000893!4.97e-12!6;CL:0002489!4.97e-12!6;CL:0000898!4.97e-12!6;CL:0000809!4.97e-12!6;CL:0000810!4.97e-12!6;CL:0000895!4.97e-12!6;CL:0000808!4.97e-12!6;CL:0000894!4.97e-12!6;CL:0000806!4.97e-12!6;CL:0000807!4.97e-12!6;CL:0000805!4.97e-12!6;CL:0002425!4.97e-12!6;CL:0002436!4.97e-12!6;CL:0002427!4.97e-12!6;CL:0002428!4.97e-12!6;CL:0002429!4.97e-12!6;CL:0002433!4.97e-12!6;CL:0002431!4.97e-12!6;CL:0002432!4.97e-12!6;CL:0002320!3.33e-11!46;CL:0000134!3.33e-11!46;CL:0000219!4.72e-09!54;CL:0000553!1.89e-08!6;CL:0000556!1.89e-08!6;CL:0000063!8.10e-07!66|ontology_enrichment_celltype_v019_2=CL:0002031,4.81e-28,25;CL:0000624,3.83e-27,8;CL:0000838,5.42e-26,12;CL:0000791,3.70e-24,9;CL:0000789,3.70e-24,9;CL:0002420,3.70e-24,9;CL:0002419,3.70e-24,9;CL:0000790,3.70e-24,9;CL:0000542,5.34e-24,13;CL:0000051,5.34e-24,13;CL:0000988,7.61e-22,32;CL:0002032,7.61e-22,32;CL:0000037,7.61e-22,32;CL:0000837,7.61e-22,32;CL:0000084,8.22e-20,11;CL:0000827,8.22e-20,11;CL:0000738,2.33e-18,17;CL:0002087,2.33e-18,17;CL:0002320,4.40e-15,46;CL:0000134,4.40e-15,46;CL:0000553,3.68e-14,6;CL:0000556,3.68e-14,6;CL:0000893,1.36e-13,6;CL:0002489,1.36e-13,6;CL:0000898,1.36e-13,6;CL:0000809,1.36e-13,6;CL:0000810,1.36e-13,6;CL:0000895,1.36e-13,6;CL:0000808,1.36e-13,6;CL:0000894,1.36e-13,6;CL:0000806,1.36e-13,6;CL:0000807,1.36e-13,6;CL:0000805,1.36e-13,6;CL:0002425,1.36e-13,6;CL:0002436,1.36e-13,6;CL:0002427,1.36e-13,6;CL:0002428,1.36e-13,6;CL:0002429,1.36e-13,6;CL:0002433,1.36e-13,6;CL:0002431,1.36e-13,6;CL:0002432,1.36e-13,6;CL:0000219,8.78e-13,54;CL:0000945,3.04e-10,1;CL:0000236,3.04e-10,1;CL:0000826,3.04e-10,1;CL:0000815,3.74e-10,1;CL:0000792,3.74e-10,1;CL:0000050,1.20e-09,9;CL:0000723,2.31e-07,91;CL:0000048,2.31e-07,91;CL:0000034,7.22e-07,97;CL:0000839,7.57e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.02e-15!48;UBERON:0002390!2.40e-14!45;UBERON:0003061!2.40e-14!45;UBERON:0002384!3.33e-11!46;UBERON:0004177!4.28e-11!29;UBERON:0002405!4.01e-09!70;UBERON:0003081!2.49e-08!88;UBERON:0002106!1.99e-07!6;UBERON:0004457!1.99e-07!6;UBERON:0000042!1.99e-07!6;UBERON:0004854!1.99e-07!6;UBERON:0009034!1.99e-07!6;UBERON:0002095!1.99e-07!6;UBERON:0004782!1.99e-07!6;UBERON:0003281!1.99e-07!6;UBERON:0009664!1.99e-07!6;UBERON:0002296!1.99e-07!6;UBERON:0005602!1.99e-07!6;UBERON:0001179!1.99e-07!6;UBERON:0006293!1.99e-07!6;UBERON:0000065!3.53e-07!41;UBERON:0001004!5.94e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.40e-15,46;UBERON:0000029,6.88e-10,1;UBERON:0001097,6.88e-10,1;UBERON:0003968,6.88e-10,1;UBERON:0001467,6.88e-10,1;UBERON:0002193,1.05e-08,48;UBERON:0002405,1.05e-08,48;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,1.40788722151667,0.70219357896598,0,0.159544317990673,3.76641605848653,1.04904482902797,0,0.809901069559304,0,4.88966356305268,5.89592064504677,3.39511721438424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr16:45225058..45225071,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=576 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:45225058..45225071,+ | |||
|id=chr16:45225058..45225071,+ | |||
|ontology_enrichment_celltype=CL:0000791!6.76e-20!9;CL:0000789!6.76e-20!9;CL:0002420!6.76e-20!9;CL:0002419!6.76e-20!9;CL:0000790!6.76e-20!9;CL:0000838!1.31e-18!12;CL:0002031!1.13e-17!25;CL:0000988!1.38e-17!32;CL:0002032!1.38e-17!32;CL:0000037!1.38e-17!32;CL:0000566!1.38e-17!32;CL:0000837!1.38e-17!32;CL:0000624!2.31e-17!8;CL:0000542!4.80e-17!13;CL:0000051!4.80e-17!13;CL:0000084!4.98e-16!11;CL:0000827!4.98e-16!11;CL:0000738!1.24e-12!17;CL:0002087!1.24e-12!17;CL:0000893!4.97e-12!6;CL:0002489!4.97e-12!6;CL:0000898!4.97e-12!6;CL:0000809!4.97e-12!6;CL:0000810!4.97e-12!6;CL:0000895!4.97e-12!6;CL:0000808!4.97e-12!6;CL:0000894!4.97e-12!6;CL:0000806!4.97e-12!6;CL:0000807!4.97e-12!6;CL:0000805!4.97e-12!6;CL:0002425!4.97e-12!6;CL:0002436!4.97e-12!6;CL:0002427!4.97e-12!6;CL:0002428!4.97e-12!6;CL:0002429!4.97e-12!6;CL:0002433!4.97e-12!6;CL:0002431!4.97e-12!6;CL:0002432!4.97e-12!6;CL:0002320!3.33e-11!46;CL:0000134!3.33e-11!46;CL:0000219!4.72e-09!54;CL:0000553!1.89e-08!6;CL:0000556!1.89e-08!6;CL:0000063!8.10e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.81e-28,25;CL:0000624,3.83e-27,8;CL:0000838,5.42e-26,12;CL:0000791,3.70e-24,9;CL:0000789,3.70e-24,9;CL:0002420,3.70e-24,9;CL:0002419,3.70e-24,9;CL:0000790,3.70e-24,9;CL:0000542,5.34e-24,13;CL:0000051,5.34e-24,13;CL:0000988,7.61e-22,32;CL:0002032,7.61e-22,32;CL:0000037,7.61e-22,32;CL:0000837,7.61e-22,32;CL:0000084,8.22e-20,11;CL:0000827,8.22e-20,11;CL:0000738,2.33e-18,17;CL:0002087,2.33e-18,17;CL:0002320,4.40e-15,46;CL:0000134,4.40e-15,46;CL:0000553,3.68e-14,6;CL:0000556,3.68e-14,6;CL:0000893,1.36e-13,6;CL:0002489,1.36e-13,6;CL:0000898,1.36e-13,6;CL:0000809,1.36e-13,6;CL:0000810,1.36e-13,6;CL:0000895,1.36e-13,6;CL:0000808,1.36e-13,6;CL:0000894,1.36e-13,6;CL:0000806,1.36e-13,6;CL:0000807,1.36e-13,6;CL:0000805,1.36e-13,6;CL:0002425,1.36e-13,6;CL:0002436,1.36e-13,6;CL:0002427,1.36e-13,6;CL:0002428,1.36e-13,6;CL:0002429,1.36e-13,6;CL:0002433,1.36e-13,6;CL:0002431,1.36e-13,6;CL:0002432,1.36e-13,6;CL:0000219,8.78e-13,54;CL:0000945,3.04e-10,1;CL:0000236,3.04e-10,1;CL:0000826,3.04e-10,1;CL:0000815,3.74e-10,1;CL:0000792,3.74e-10,1;CL:0000050,1.20e-09,9;CL:0000723,2.31e-07,91;CL:0000048,2.31e-07,91;CL:0000034,7.22e-07,97;CL:0000839,7.57e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.02e-15!48;UBERON:0002390!2.40e-14!45;UBERON:0003061!2.40e-14!45;UBERON:0002384!3.33e-11!46;UBERON:0004177!4.28e-11!29;UBERON:0002405!4.01e-09!70;UBERON:0003081!2.49e-08!88;UBERON:0002106!1.99e-07!6;UBERON:0004457!1.99e-07!6;UBERON:0000042!1.99e-07!6;UBERON:0004854!1.99e-07!6;UBERON:0009034!1.99e-07!6;UBERON:0002095!1.99e-07!6;UBERON:0004782!1.99e-07!6;UBERON:0003281!1.99e-07!6;UBERON:0009664!1.99e-07!6;UBERON:0002296!1.99e-07!6;UBERON:0005602!1.99e-07!6;UBERON:0001179!1.99e-07!6;UBERON:0006293!1.99e-07!6;UBERON:0000065!3.53e-07!41;UBERON:0001004!5.94e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.40e-15,46;UBERON:0000029,6.88e-10,1;UBERON:0001097,6.88e-10,1;UBERON:0003968,6.88e-10,1;UBERON:0001467,6.88e-10,1;UBERON:0002193,1.05e-08,48;UBERON:0002405,1.05e-08,48;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,1.40788722151667,0.70219357896598,0,0.159544317990673,3.76641605848653,1.04904482902797,0,0.809901069559304,0,4.88966356305268,5.89592064504677,3.39511721438424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr16:45225058..45225071,+ | |||
}} |
Revision as of 12:45, 13 September 2013
Short description: | p@chr16:45225058..45225071, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:45225058..45225071, + |
Coexpression cluster: | MCL_coexpression_mm9:576 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.40e-15 | 46 |
lymph node | 6.88e-10 | 1 |
axillary lymph node | 6.88e-10 | 1 |
peripheral lymph node | 6.88e-10 | 1 |
shoulder | 6.88e-10 | 1 |
hemolymphoid system | 1.05e-08 | 48 |
immune system | 1.05e-08 | 48 |
hematopoietic system | 6.11e-07 | 45 |
blood island | 6.11e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.