FFCP PHASE1:Mm9::chr16:32621558..32621565,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=15|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:32621558..32621565,+|id=chr16:32621558..32621565,+|ontology_enrichment_celltype=CL:0002027!3.38e-07!3;CL:0002006!3.38e-07!3;CL:0002024!3.38e-07!3|ontology_enrichment_celltype_v019_2=CL:0002027,2.85e-15,3;CL:0002006,2.85e-15,3;CL:0002024,2.85e-15,3;CL:0000839,3.65e-08,13;CL:0000553,4.03e-08,6;CL:0000556,4.03e-08,6;CL:0002476,8.63e-07,2;CL:0000763,9.62e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.04e-08!70;UBERON:0005057!4.59e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.19e-08,22;UBERON:0007499,2.19e-08,22;UBERON:0006925,2.19e-08,22;UBERON:0009497,2.19e-08,22;UBERON:0000015,2.19e-08,22;UBERON:0002423,2.19e-08,22;UBERON:0006235,2.19e-08,22;UBERON:0008835,2.19e-08,22;UBERON:0003894,2.19e-08,22;UBERON:0004161,2.19e-08,22;UBERON:0008836,2.19e-08,22;UBERON:0009854,4.88e-08,23;UBERON:0009856,4.88e-08,23;UBERON:0002365,2.02e-07,25;UBERON:0002330,2.02e-07,25;UBERON:0002371,9.62e-07,16|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0,0,0,0,1.33243904726265,1.21485160433896,0.699561878128147,0,0,0,0,0.595745707205312,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0.147610147979602,0,0,0,0,2.16214894624523,0.674586337154561,1.01430060694251,0.241177159752417,0,0.287696137450811,1.62135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,2.63715839806567,0.956859594047176,0.686334519619568,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr16:32621558..32621565,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:32621558..32621565,+ | |||
|id=chr16:32621558..32621565,+ | |||
|ontology_enrichment_celltype=CL:0002027!3.38e-07!3;CL:0002006!3.38e-07!3;CL:0002024!3.38e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,2.85e-15,3;CL:0002006,2.85e-15,3;CL:0002024,2.85e-15,3;CL:0000839,3.65e-08,13;CL:0000553,4.03e-08,6;CL:0000556,4.03e-08,6;CL:0002476,8.63e-07,2;CL:0000763,9.62e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.04e-08!70;UBERON:0005057!4.59e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.19e-08,22;UBERON:0007499,2.19e-08,22;UBERON:0006925,2.19e-08,22;UBERON:0009497,2.19e-08,22;UBERON:0000015,2.19e-08,22;UBERON:0002423,2.19e-08,22;UBERON:0006235,2.19e-08,22;UBERON:0008835,2.19e-08,22;UBERON:0003894,2.19e-08,22;UBERON:0004161,2.19e-08,22;UBERON:0008836,2.19e-08,22;UBERON:0009854,4.88e-08,23;UBERON:0009856,4.88e-08,23;UBERON:0002365,2.02e-07,25;UBERON:0002330,2.02e-07,25;UBERON:0002371,9.62e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0,0,0,0,1.33243904726265,1.21485160433896,0.699561878128147,0,0,0,0,0.595745707205312,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0,0.147610147979602,0,0,0,0,2.16214894624523,0.674586337154561,1.01430060694251,0.241177159752417,0,0.287696137450811,1.62135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0,2.63715839806567,0.956859594047176,0.686334519619568,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:32621558..32621565,+ | |||
}} |
Revision as of 12:27, 13 September 2013
Short description: | p@chr16:32621558..32621565, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:32621558..32621565, + |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 2.85e-15 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.85e-15 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.85e-15 | 3 |
myeloid lineage restricted progenitor cell | 3.65e-08 | 13 |
megakaryocyte progenitor cell | 4.03e-08 | 6 |
megakaryocyte | 4.03e-08 | 6 |
bone marrow macrophage | 8.63e-07 | 2 |
myeloid cell | 9.62e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
liver | 2.19e-08 | 22 |
epithelial sac | 2.19e-08 | 22 |
digestive gland | 2.19e-08 | 22 |
epithelium of foregut-midgut junction | 2.19e-08 | 22 |
anatomical boundary | 2.19e-08 | 22 |
hepatobiliary system | 2.19e-08 | 22 |
foregut-midgut junction | 2.19e-08 | 22 |
hepatic diverticulum | 2.19e-08 | 22 |
liver primordium | 2.19e-08 | 22 |
septum transversum | 2.19e-08 | 22 |
liver bud | 2.19e-08 | 22 |
digestive tract diverticulum | 4.88e-08 | 23 |
sac | 4.88e-08 | 23 |
exocrine gland | 2.02e-07 | 25 |
exocrine system | 2.02e-07 | 25 |
bone marrow | 9.62e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.