Personal tools

FFCP PHASE1:Mm9::chr16:23610048..23610085,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=67775|HGNC=|MCL_coexpression_id=193|UniProt=Q9ER80,Q923D9|association_with_transcript=43bp_to_ENSMUST00000038423,NM_023386,uc007ytw.2_5end|description=CAGE_peak_2_at_Rtp4_5end|id=chr16:23610048..23610085,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.49e-08!130;UBERON:0000925!8.49e-08!130;UBERON:0006595!8.49e-08!130;UBERON:0002405!2.06e-07!70;UBERON:0001007!3.34e-07!128;UBERON:0001555!3.34e-07!128;UBERON:0007026!3.34e-07!128;UBERON:0004921!4.95e-07!126;UBERON:0004185!4.95e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.42e-08,118;UBERON:0000925,4.42e-08,118;UBERON:0006595,4.42e-08,118;UBERON:0001007,1.88e-07,116;UBERON:0001555,1.88e-07,116;UBERON:0007026,1.88e-07,116;UBERON:0004921,2.81e-07,114|phase1_expression=0.320297694209588,6.2815573375085,4.54999239389536,3.93203474698879,3.50627010962443,3.86122325397347,3.03696432774183,7.48915275961142,1.267098499365,1.17032263160997,0.34243593645101,0.398860794976682,8.04643430676667,4.10875891369288,6.32908547449759,10.5287139042709,1.39912375625629,9.30613387806801,6.03303507865251,2.97072756258621,4.93251082876205,3.07801948722744,3.39559725880616,3.03985603307473,2.06468352960453,7.46501553349526,6.8921919385452,5.38678081714723,6.84084310042946,4.03248207615889,7.31710685162506,0,0,0,0,0.332469290716985,0.204169356262369,82.0321996244339,69.5388456626182,70.6757054364628,59.9996117791635,49.1792749170081,55.8336905985827,1.00717454380462,0.811015449756117,0.183546752161682,6.25913075478431,0.872100625521786,0.439372365468944,1.55543919259427,1.53985063787899,1.43752564364972,3.18786951509699,5.80289713609076,5.04140698713696,2.05807548828758,0.85960031981627,2.57836046138721,0,0,0,1.0165335962074,3.55717918444456,49.0445345918362,65.2651799294203,56.838409195688,8.38880309451533,3.45796474789399,0,0,0,0.285650984403804,0.662605622854841,0.122490799214954,0,0,0,0.255374676170375,0.614426133024974,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.854230084794618,0,13.1006314466408,19.0440331469099,38.2621125086215,14.6272059086836,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,2.80888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,6.16592950482924,20.7150306917737,3.85949561568544,1.38788261412909,0.913396434936424,0.461230994512117,5.57673770044703,4.23319345688537,4.90099706185734,10.8765785803125,12.8693427658721,20.3460426948471,2.10296904931632,3.5334642953663,3.39412677194655,1.86391761218122,0.585561594023094,0,7.15279754584056,0.838705871541442,1.19980546198682,1.14363204365758,1.49790639404823,1.37250180845588,0.125654352112864,1.04294592115366,0.255715457330331,0.83115217823824,0.324482526135515,2.13862664085664,3.6078021476927,2.0217820674694,2.52530227063769,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,0.748401490664606,1.0249097622788,0.655912071918102,1.29351685369508,0.215567992932842,0.189106080167819,0.175951124163949,1.31517439456545,0.556094498451196,1.0447564995665,2.88094990971121,0.398068533636986,0,0.772043721344145,0.284163499395593,0.414251545071004,0.938104239924385,1.44049649168812,0.946978942340841,1.37734962223183,0.617068451549513,0.697601834251224,2.95100741539581,1.5179494507732,1.6455984991348,2.46251196118643,1.78351381000883,3.65499968563331,11.6361561104257,5.77087600669599,0.210289948564127,0.823236899034275,13.5471701023357,17.1892868331304,0.426576501070468,0.928946687441754,1.03093969057675,0.80673409849337,0.667134131534611,8.17970192284004,7.59246498471219,9.88193728344065,9.55073793441024,21.089386036362,17.1568396664826,20.6728463990471,9.51007419448655,5.37681437786791,0.569003702859245,0.685491075658373,1.1270773567308,1.62921062276251,5.62462212786115,2.73529697572242,1.3279672796094,3.39503340353085,4.70996183524124,2.83813477020141,9.78293669387591,1.16791574001266,0.589676985339609,3.14806957338795,2.02860121388503,1.20588579876208,3.56476192493988,13.8094145976389,3.89124544260085,7.68771956926628,17.2521847832825,16.0020607497456,8.42501717409313,8.5876818502018,4.84373016509163,3.37710464954357,11.4546977903295,0.757965647081939,0.325929952884052,0.848725428875941,0.938760993154008,2.34508760418542,8.33152743101048,6.04914308359176,1.89162172927429,3.76489972402917,1.43509291791738,6.55453258862952,5.18054945597687,5.06271705035291,114.601375793847,114.764099285748,12.7858710984949,9.10591262805617,1.44495530989013,0.820481806145422,0,1.51482556322624,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0,0,0.395287777946524,0.321321316421807,2.55492153374884,3.20518086601059,0.81443479676788,6.76377504187395,0,0.728341908464944,1.209294227859,1.13163047853539,0.885905678642318,3.3817866273832,6.97756391554197,2.90826983582004,2.85197902707777,0.948110273807448,2.10837217149998,2.06271086496374,3.74483566329167,0.36012218806262,1.29358683782755,0.428674070063185,1.77340233642274,0.356737635204141,0.658196082408484,1.8267896946876,9.1521966144847,7.41412248023371,1.98475558249466,1.97863503529776,2.74489525383039,1.93001359770099,2.38744688006273,0.492422699235184,10.4933101186746,0.741701208042039,6.83483523191411,2.06386867963222,17.5934801001226,3.57900068308913,3.69074414846768,7.54967971581525,7.13909405974192,8.95689294871411,9.12119827109197,4.77335309007557,0.474503990371703,0.813277868507395,0.432021363287205,2.29997125615916,4.36725127492355,1.75323650300267,3.47144514046411,2.35580347785627,1.68499465279331,1.86401793926078,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,1.520605129417,0.821500670520278,0.2604087696879,0.524296722128554,0.483168241652012,1.15212002503146,12.0084225838708,0.810900861160657,0.821687657318618,4.15746633528944,2.68540043501222,6.55648470778174,3.846254384639,3.98761723371358,3.53382574818517,3.35309949281999,3.93222122033678,5.65255708290564,4.52195655709548,3.97381467417334,2.0405734525369,0.443971906748129,0,0,2.12508553435409,9.57180624801028,17.3994043053902,1.71494703263253,5.01572104035363,0.564751842617067,0,0,0.68741272937475,0,1.5107877947794,0,0.900642406448441,0,0,0.103787347584177,1.19707462020309,0.853668028770671,0.972426868273176,1.25767897576789,1.65459157605013,1.77797382241292,2.47242068686673,1.92551525755089,2.02157769411038,1.52087579934144,0.943131706930381,1.77918864192777,1.53660365771686,1.7230640686684,2.85776214769844,0.927074607558844,1.35036454324594,1.23625770240992,1.03039244094078,1.02860775715625,1.59728225543404,1.43061713968393,1.59881058295561,1.41164070622996,1.69229215783353,1.46342378298218,2.10455769150274,1.90125759384206,2.24456908663095,1.30498519936592,1.47756723563345,2.04615521584845,2.63392630016142,1.35034627686799,0.999242311751784,4.44470056046276,3.00819475667618,1.72159498861959,1.54413993383661,3.01428186306548|short_description=p2@Rtp4}}
|EntrezGene=67775
|HGNC=
|MCL_coexpression_id=193
|UniProt=Q9ER80,Q923D9
|association_with_transcript=43bp_to_ENSMUST00000038423,NM_023386,uc007ytw.2_5end
|description=CAGE_peak_2_at_Rtp4_5end
|id=chr16:23610048..23610085,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.49e-08!130;UBERON:0000925!8.49e-08!130;UBERON:0006595!8.49e-08!130;UBERON:0002405!2.06e-07!70;UBERON:0001007!3.34e-07!128;UBERON:0001555!3.34e-07!128;UBERON:0007026!3.34e-07!128;UBERON:0004921!4.95e-07!126;UBERON:0004185!4.95e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.42e-08,118;UBERON:0000925,4.42e-08,118;UBERON:0006595,4.42e-08,118;UBERON:0001007,1.88e-07,116;UBERON:0001555,1.88e-07,116;UBERON:0007026,1.88e-07,116;UBERON:0004921,2.81e-07,114
|phase1_expression=0.320297694209588,6.2815573375085,4.54999239389536,3.93203474698879,3.50627010962443,3.86122325397347,3.03696432774183,7.48915275961142,1.267098499365,1.17032263160997,0.34243593645101,0.398860794976682,8.04643430676667,4.10875891369288,6.32908547449759,10.5287139042709,1.39912375625629,9.30613387806801,6.03303507865251,2.97072756258621,4.93251082876205,3.07801948722744,3.39559725880616,3.03985603307473,2.06468352960453,7.46501553349526,6.8921919385452,5.38678081714723,6.84084310042946,4.03248207615889,7.31710685162506,0,0,0,0,0.332469290716985,0.204169356262369,82.0321996244339,69.5388456626182,70.6757054364628,59.9996117791635,49.1792749170081,55.8336905985827,1.00717454380462,0.811015449756117,0.183546752161682,6.25913075478431,0.872100625521786,0.439372365468944,1.55543919259427,1.53985063787899,1.43752564364972,3.18786951509699,5.80289713609076,5.04140698713696,2.05807548828758,0.85960031981627,2.57836046138721,0,0,0,1.0165335962074,3.55717918444456,49.0445345918362,65.2651799294203,56.838409195688,8.38880309451533,3.45796474789399,0,0,0,0.285650984403804,0.662605622854841,0.122490799214954,0,0,0,0.255374676170375,0.614426133024974,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.854230084794618,0,13.1006314466408,19.0440331469099,38.2621125086215,14.6272059086836,0.679971333707751,0.539703191637817,1.29955283489534,1.34408066129201,2.80888840263504,0.340860645156116,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,6.16592950482924,20.7150306917737,3.85949561568544,1.38788261412909,0.913396434936424,0.461230994512117,5.57673770044703,4.23319345688537,4.90099706185734,10.8765785803125,12.8693427658721,20.3460426948471,2.10296904931632,3.5334642953663,3.39412677194655,1.86391761218122,0.585561594023094,0,7.15279754584056,0.838705871541442,1.19980546198682,1.14363204365758,1.49790639404823,1.37250180845588,0.125654352112864,1.04294592115366,0.255715457330331,0.83115217823824,0.324482526135515,2.13862664085664,3.6078021476927,2.0217820674694,2.52530227063769,0.260240885925407,0.459804208866946,0.360124259610698,1.05493372485001,0.748401490664606,1.0249097622788,0.655912071918102,1.29351685369508,0.215567992932842,0.189106080167819,0.175951124163949,1.31517439456545,0.556094498451196,1.0447564995665,2.88094990971121,0.398068533636986,0,0.772043721344145,0.284163499395593,0.414251545071004,0.938104239924385,1.44049649168812,0.946978942340841,1.37734962223183,0.617068451549513,0.697601834251224,2.95100741539581,1.5179494507732,1.6455984991348,2.46251196118643,1.78351381000883,3.65499968563331,11.6361561104257,5.77087600669599,0.210289948564127,0.823236899034275,13.5471701023357,17.1892868331304,0.426576501070468,0.928946687441754,1.03093969057675,0.80673409849337,0.667134131534611,8.17970192284004,7.59246498471219,9.88193728344065,9.55073793441024,21.089386036362,17.1568396664826,20.6728463990471,9.51007419448655,5.37681437786791,0.569003702859245,0.685491075658373,1.1270773567308,1.62921062276251,5.62462212786115,2.73529697572242,1.3279672796094,3.39503340353085,4.70996183524124,2.83813477020141,9.78293669387591,1.16791574001266,0.589676985339609,3.14806957338795,2.02860121388503,1.20588579876208,3.56476192493988,13.8094145976389,3.89124544260085,7.68771956926628,17.2521847832825,16.0020607497456,8.42501717409313,8.5876818502018,4.84373016509163,3.37710464954357,11.4546977903295,0.757965647081939,0.325929952884052,0.848725428875941,0.938760993154008,2.34508760418542,8.33152743101048,6.04914308359176,1.89162172927429,3.76489972402917,1.43509291791738,6.55453258862952,5.18054945597687,5.06271705035291,114.601375793847,114.764099285748,12.7858710984949,9.10591262805617,1.44495530989013,0.820481806145422,0,1.51482556322624,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.849229592366497,0,0,0.395287777946524,0.321321316421807,2.55492153374884,3.20518086601059,0.81443479676788,6.76377504187395,0,0.728341908464944,1.209294227859,1.13163047853539,0.885905678642318,3.3817866273832,6.97756391554197,2.90826983582004,2.85197902707777,0.948110273807448,2.10837217149998,2.06271086496374,3.74483566329167,0.36012218806262,1.29358683782755,0.428674070063185,1.77340233642274,0.356737635204141,0.658196082408484,1.8267896946876,9.1521966144847,7.41412248023371,1.98475558249466,1.97863503529776,2.74489525383039,1.93001359770099,2.38744688006273,0.492422699235184,10.4933101186746,0.741701208042039,6.83483523191411,2.06386867963222,17.5934801001226,3.57900068308913,3.69074414846768,7.54967971581525,7.13909405974192,8.95689294871411,9.12119827109197,4.77335309007557,0.474503990371703,0.813277868507395,0.432021363287205,2.29997125615916,4.36725127492355,1.75323650300267,3.47144514046411,2.35580347785627,1.68499465279331,1.86401793926078,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,1.520605129417,0.821500670520278,0.2604087696879,0.524296722128554,0.483168241652012,1.15212002503146,12.0084225838708,0.810900861160657,0.821687657318618,4.15746633528944,2.68540043501222,6.55648470778174,3.846254384639,3.98761723371358,3.53382574818517,3.35309949281999,3.93222122033678,5.65255708290564,4.52195655709548,3.97381467417334,2.0405734525369,0.443971906748129,0,0,2.12508553435409,9.57180624801028,17.3994043053902,1.71494703263253,5.01572104035363,0.564751842617067,0,0,0.68741272937475,0,1.5107877947794,0,0.900642406448441,0,0,0.103787347584177,1.19707462020309,0.853668028770671,0.972426868273176,1.25767897576789,1.65459157605013,1.77797382241292,2.47242068686673,1.92551525755089,2.02157769411038,1.52087579934144,0.943131706930381,1.77918864192777,1.53660365771686,1.7230640686684,2.85776214769844,0.927074607558844,1.35036454324594,1.23625770240992,1.03039244094078,1.02860775715625,1.59728225543404,1.43061713968393,1.59881058295561,1.41164070622996,1.69229215783353,1.46342378298218,2.10455769150274,1.90125759384206,2.24456908663095,1.30498519936592,1.47756723563345,2.04615521584845,2.63392630016142,1.35034627686799,0.999242311751784,4.44470056046276,3.00819475667618,1.72159498861959,1.54413993383661,3.01428186306548
|short_description=p2@Rtp4
}}

Revision as of 12:18, 13 September 2013

Short description:p2@Rtp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rtp4_5end
Coexpression cluster:MCL_coexpression_mm9:193
Association with transcript: 43bp_to_ENSMUST00000038423, NM_023386, uc007ytw.2_5end
EntrezGene:Rtp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rtp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.53
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G882.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H169.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H370.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G960.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H249.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H455.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C749.04
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E765.27
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D256.84
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D913.10
Mouse Schwann, donor2.CNhs12573.11746-123F919.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.17
accessory axillary lymph node, adult.CNhs10475.1063-29H920.72
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F55.58
adrenal gland, neonate N00.CNhs11191.1311-23C14.23
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H112.87
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I313.55
intestine, adult.CNhs10496.178-9A317.19
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E99.88
intestine, neonate N06.CNhs11102.688-20B89.55
intestine, neonate N07.CNhs11095.720-20F221.09
intestine, neonate N10.CNhs11098.755-23A517.16
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E39.51
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1114.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1114.76
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G37.41
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I110.49
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F217.59
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.12
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A93.47
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D33.35
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A25.65
thymus, neonate N25.CNhs11125.1362-25G74.52
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F59.57
uterus, adult.CNhs10509.92-27E517.40
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure4.42e-08118
endoderm4.42e-08118
presumptive endoderm4.42e-08118
digestive system1.88e-07116
digestive tract1.88e-07116
primitive gut1.88e-07116
subdivision of digestive tract2.81e-07114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:23610048..23610085,%2B&oldid=2934260"