FFCP PHASE1:Mm9::chr16:19218706..19218713,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:19218706..19218713,+|id=chr16:19218706..19218713,+|ontology_enrichment_celltype=CL:0000553!7.63e-17!6;CL:0000556!7.63e-17!6;CL:0000050!2.62e-11!9;CL:0000414!2.76e-09!11;CL:0000839!7.02e-08!13;CL:0000945!2.11e-07!1;CL:0000236!2.11e-07!1;CL:0000826!2.11e-07!1|ontology_enrichment_celltype_v019_2=CL:0000553,4.62e-27,6;CL:0000556,4.62e-27,6;CL:0000050,2.30e-18,9;CL:0000945,2.59e-18,1;CL:0000236,2.59e-18,1;CL:0000826,2.59e-18,1;CL:0000839,5.49e-13,13;CL:0002031,7.49e-12,25;CL:0000763,1.05e-10,16;CL:0000988,2.11e-09,32;CL:0002032,2.11e-09,32;CL:0000037,2.11e-09,32;CL:0000837,2.11e-09,32;CL:0000049,3.87e-09,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!8.73e-16!6;UBERON:0004457!8.73e-16!6;UBERON:0000042!8.73e-16!6;UBERON:0004854!8.73e-16!6;UBERON:0009034!8.73e-16!6;UBERON:0002095!8.73e-16!6;UBERON:0004782!8.73e-16!6;UBERON:0003281!8.73e-16!6;UBERON:0009664!8.73e-16!6;UBERON:0002296!8.73e-16!6;UBERON:0005602!8.73e-16!6;UBERON:0001179!8.73e-16!6;UBERON:0006293!8.73e-16!6;UBERON:0002193!2.59e-11!48;UBERON:0003887!1.42e-09!10;UBERON:0002465!7.76e-09!3;UBERON:0002390!9.82e-08!45;UBERON:0003061!9.82e-08!45;UBERON:0002075!1.33e-07!19;UBERON:0000029!1.83e-07!1;UBERON:0001097!1.83e-07!1;UBERON:0003968!1.83e-07!1;UBERON:0008785!1.83e-07!1;UBERON:0001467!1.83e-07!1;UBERON:0001421!1.83e-07!1;UBERON:0002405!2.32e-07!70;UBERON:0001255!4.21e-07!1;UBERON:0001556!4.21e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.74e-18,1;UBERON:0001097,1.74e-18,1;UBERON:0003968,1.74e-18,1;UBERON:0001467,1.74e-18,1;UBERON:0002371,1.05e-10,16;UBERON:0001474,5.39e-08,22;UBERON:0004765,5.39e-08,22;UBERON:0001434,5.39e-08,22;UBERON:0002465,4.77e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809901069559304,0,3.62781490161973,4.79900517620086,4.2438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:19218706..19218713,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:19218706..19218713,+ | |||
|id=chr16:19218706..19218713,+ | |||
|ontology_enrichment_celltype=CL:0000553!7.63e-17!6;CL:0000556!7.63e-17!6;CL:0000050!2.62e-11!9;CL:0000414!2.76e-09!11;CL:0000839!7.02e-08!13;CL:0000945!2.11e-07!1;CL:0000236!2.11e-07!1;CL:0000826!2.11e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.62e-27,6;CL:0000556,4.62e-27,6;CL:0000050,2.30e-18,9;CL:0000945,2.59e-18,1;CL:0000236,2.59e-18,1;CL:0000826,2.59e-18,1;CL:0000839,5.49e-13,13;CL:0002031,7.49e-12,25;CL:0000763,1.05e-10,16;CL:0000988,2.11e-09,32;CL:0002032,2.11e-09,32;CL:0000037,2.11e-09,32;CL:0000837,2.11e-09,32;CL:0000049,3.87e-09,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.73e-16!6;UBERON:0004457!8.73e-16!6;UBERON:0000042!8.73e-16!6;UBERON:0004854!8.73e-16!6;UBERON:0009034!8.73e-16!6;UBERON:0002095!8.73e-16!6;UBERON:0004782!8.73e-16!6;UBERON:0003281!8.73e-16!6;UBERON:0009664!8.73e-16!6;UBERON:0002296!8.73e-16!6;UBERON:0005602!8.73e-16!6;UBERON:0001179!8.73e-16!6;UBERON:0006293!8.73e-16!6;UBERON:0002193!2.59e-11!48;UBERON:0003887!1.42e-09!10;UBERON:0002465!7.76e-09!3;UBERON:0002390!9.82e-08!45;UBERON:0003061!9.82e-08!45;UBERON:0002075!1.33e-07!19;UBERON:0000029!1.83e-07!1;UBERON:0001097!1.83e-07!1;UBERON:0003968!1.83e-07!1;UBERON:0008785!1.83e-07!1;UBERON:0001467!1.83e-07!1;UBERON:0001421!1.83e-07!1;UBERON:0002405!2.32e-07!70;UBERON:0001255!4.21e-07!1;UBERON:0001556!4.21e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.74e-18,1;UBERON:0001097,1.74e-18,1;UBERON:0003968,1.74e-18,1;UBERON:0001467,1.74e-18,1;UBERON:0002371,1.05e-10,16;UBERON:0001474,5.39e-08,22;UBERON:0004765,5.39e-08,22;UBERON:0001434,5.39e-08,22;UBERON:0002465,4.77e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809901069559304,0,3.62781490161973,4.79900517620086,4.2438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:19218706..19218713,+ | |||
}} |
Revision as of 12:08, 13 September 2013
Short description: | p@chr16:19218706..19218713, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:19218706..19218713, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.62e-27 | 6 |
megakaryocyte | 4.62e-27 | 6 |
megakaryocyte-erythroid progenitor cell | 2.30e-18 | 9 |
lymphocyte of B lineage | 2.59e-18 | 1 |
B cell | 2.59e-18 | 1 |
pro-B cell | 2.59e-18 | 1 |
myeloid lineage restricted progenitor cell | 5.49e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 7.49e-12 | 25 |
myeloid cell | 1.05e-10 | 16 |
hematopoietic cell | 2.11e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.11e-09 | 32 |
hematopoietic stem cell | 2.11e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.11e-09 | 32 |
common myeloid progenitor | 3.87e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.74e-18 | 1 |
axillary lymph node | 1.74e-18 | 1 |
peripheral lymph node | 1.74e-18 | 1 |
shoulder | 1.74e-18 | 1 |
bone marrow | 1.05e-10 | 16 |
bone element | 5.39e-08 | 22 |
skeletal element | 5.39e-08 | 22 |
skeletal system | 5.39e-08 | 22 |
lymphoid system | 4.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.