FFCP PHASE1:Hg19::chr4:77956674..77956685,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:77956674..77956685,+|id=chr4:77956674..77956685,+|ontology_enrichment_celltype=CL:0000055!2.10e-16!180;CL:0000057!1.27e-14!75;CL:0002620!1.96e-10!23|ontology_enrichment_celltype_v019=CL:0002615;7.57e-17;3!CL:0002574;5.06e-13;1!CL:0000136;8.99e-09;13!CL:0002620;2.30e-08;23!CL:0002617;3.81e-07;2|ontology_enrichment_celltype_v019_2=CL:0002615,8.55e-17,3;CL:0002574,1.09e-12,1;CL:0002620,2.54e-08,23;CL:0000136,1.04e-07,15;CL:0002617,2.74e-07,2|ontology_enrichment_development_v019=UBERON:0003099;5.06e-13;1!UBERON:0003852;5.06e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.71e-10;5!DOID:450;2.71e-10;5!DOID:66;2.71e-10;5!DOID:423;2.71e-10;5!DOID:0080000;2.71e-10;5!DOID:11722;2.71e-10;5|ontology_enrichment_disease_v019_2=DOID:17,3.27e-10,5;DOID:450,3.27e-10,5;DOID:66,3.27e-10,5;DOID:423,3.27e-10,5;DOID:0080000,3.27e-10,5;DOID:11722,3.27e-10,5|ontology_enrichment_uberon=UBERON:0002199!2.17e-08!45;UBERON:0002416!2.17e-08!45;UBERON:0003102!3.29e-08!95;UBERON:0002097!8.34e-08!40|ontology_enrichment_uberon_v019=UBERON:0003688;2.47e-18;6!UBERON:0002358;2.47e-18;6!UBERON:0003684;2.47e-18;6!UBERON:0001178;2.47e-18;6!UBERON:0007195;5.06e-13;1!UBERON:0005705;5.06e-13;1!UBERON:0008193;5.06e-13;1!UBERON:0010912;5.06e-13;1!UBERON:0002514;5.06e-13;1!UBERON:0003457;5.06e-13;1!UBERON:0008907;5.06e-13;1!UBERON:0008001;5.06e-13;1!UBERON:0007213;5.06e-13;1!UBERON:0009891;5.06e-13;1!UBERON:0007914;5.06e-13;1!UBERON:0007375;5.06e-13;1!UBERON:0003323;5.06e-13;1!UBERON:0010258;5.06e-13;1!UBERON:0005253;5.06e-13;1!UBERON:0007842;5.06e-13;1!UBERON:0002397;5.06e-13;1!UBERON:0003113;5.06e-13;1!UBERON:0003277;5.06e-13;1!UBERON:0001709;5.06e-13;1!UBERON:0002244;5.06e-13;1!UBERON:0005620;5.06e-13;1!UBERON:0010364;5.06e-13;1!UBERON:0004288;5.06e-13;1!UBERON:0004457;1.98e-12;9!UBERON:0000042;1.98e-12;9!UBERON:0004089;3.81e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.13e-18,6;UBERON:0002358,3.13e-18,6;UBERON:0003684,3.13e-18,6;UBERON:0001178,3.13e-18,6;UBERON:0005705,2.95e-13,1;UBERON:0008193,2.95e-13,1;UBERON:0010912,2.95e-13,1;UBERON:0002514,2.95e-13,1;UBERON:0003457,2.95e-13,1;UBERON:0008907,2.95e-13,1;UBERON:0008001,2.95e-13,1;UBERON:0007213,2.95e-13,1;UBERON:0009891,2.95e-13,1;UBERON:0007914,2.95e-13,1;UBERON:0009292,2.95e-13,1;UBERON:0003099,2.95e-13,1;UBERON:0007375,2.95e-13,1;UBERON:0003323,2.95e-13,1;UBERON:0010258,2.95e-13,1;UBERON:0007842,2.95e-13,1;UBERON:0009494,2.95e-13,1;UBERON:0010042,2.95e-13,1;UBERON:0010045,2.95e-13,1;UBERON:0010259,2.95e-13,1;UBERON:0010359,2.95e-13,1;UBERON:0009526,2.95e-13,1;UBERON:0002397,2.95e-13,1;UBERON:0003113,2.95e-13,1;UBERON:0003277,2.95e-13,1;UBERON:0001709,2.95e-13,1;UBERON:0004066,2.95e-13,1;UBERON:0002244,2.95e-13,1;UBERON:0005620,2.95e-13,1;UBERON:0004362,2.95e-13,1;UBERON:0010364,2.95e-13,1;UBERON:0010046,2.95e-13,1;UBERON:0005868,2.95e-13,1;UBERON:0007238,2.95e-13,1;UBERON:0004288,2.95e-13,1;UBERON:0004068,2.95e-13,1;UBERON:0010334,2.95e-13,1;UBERON:0003852,2.95e-13,1;UBERON:0010253,2.95e-13,1;UBERON:0007195,7.68e-13,1;UBERON:0004457,2.07e-09,12;UBERON:0000042,2.07e-09,12;UBERON:0005253,2.91e-07,2;UBERON:0004089,2.91e-07,2|phase1_expression=0.363356758541113,1.49870366723688,1.12763523276777,4.00293193412522,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.579386075843295,0,0,0,0.221729397462564,0.43917392846563,0,0,0.370784442784429,0,0.348259474598534,0.26591592103773,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0,0.302714855289863,0,0,0.624320153660641,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0.61246251376468,0.368502951935304,0.103325781175765,0,0.741800787835671,0,0,0.336672227908132,0,0.277064115484183,0,0.30648779579902,0.150238058906597,0.340296549480063,0.89694817844431,1.2813443329114,1.05965950579781,0.900273288253207,0.206105058476878,0.772921620136887,1.30281799432113,0.337552664482532,0.487185025805993,0.757301322732344,0.460249493211497,0.323292113637624,1.06502877754984,0.503760491138201,0,0,0,0,0.243947412259191,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:77956674..77956685,+ | |||
|id=chr4:77956674..77956685,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.10e-16!180;CL:0000057!1.27e-14!75;CL:0002620!1.96e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002615;7.57e-17;3!CL:0002574;5.06e-13;1!CL:0000136;8.99e-09;13!CL:0002620;2.30e-08;23!CL:0002617;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,8.55e-17,3;CL:0002574,1.09e-12,1;CL:0002620,2.54e-08,23;CL:0000136,1.04e-07,15;CL:0002617,2.74e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;5.06e-13;1!UBERON:0003852;5.06e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.71e-10;5!DOID:450;2.71e-10;5!DOID:66;2.71e-10;5!DOID:423;2.71e-10;5!DOID:0080000;2.71e-10;5!DOID:11722;2.71e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.27e-10,5;DOID:450,3.27e-10,5;DOID:66,3.27e-10,5;DOID:423,3.27e-10,5;DOID:0080000,3.27e-10,5;DOID:11722,3.27e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.17e-08!45;UBERON:0002416!2.17e-08!45;UBERON:0003102!3.29e-08!95;UBERON:0002097!8.34e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.47e-18;6!UBERON:0002358;2.47e-18;6!UBERON:0003684;2.47e-18;6!UBERON:0001178;2.47e-18;6!UBERON:0007195;5.06e-13;1!UBERON:0005705;5.06e-13;1!UBERON:0008193;5.06e-13;1!UBERON:0010912;5.06e-13;1!UBERON:0002514;5.06e-13;1!UBERON:0003457;5.06e-13;1!UBERON:0008907;5.06e-13;1!UBERON:0008001;5.06e-13;1!UBERON:0007213;5.06e-13;1!UBERON:0009891;5.06e-13;1!UBERON:0007914;5.06e-13;1!UBERON:0007375;5.06e-13;1!UBERON:0003323;5.06e-13;1!UBERON:0010258;5.06e-13;1!UBERON:0005253;5.06e-13;1!UBERON:0007842;5.06e-13;1!UBERON:0002397;5.06e-13;1!UBERON:0003113;5.06e-13;1!UBERON:0003277;5.06e-13;1!UBERON:0001709;5.06e-13;1!UBERON:0002244;5.06e-13;1!UBERON:0005620;5.06e-13;1!UBERON:0010364;5.06e-13;1!UBERON:0004288;5.06e-13;1!UBERON:0004457;1.98e-12;9!UBERON:0000042;1.98e-12;9!UBERON:0004089;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.13e-18,6;UBERON:0002358,3.13e-18,6;UBERON:0003684,3.13e-18,6;UBERON:0001178,3.13e-18,6;UBERON:0005705,2.95e-13,1;UBERON:0008193,2.95e-13,1;UBERON:0010912,2.95e-13,1;UBERON:0002514,2.95e-13,1;UBERON:0003457,2.95e-13,1;UBERON:0008907,2.95e-13,1;UBERON:0008001,2.95e-13,1;UBERON:0007213,2.95e-13,1;UBERON:0009891,2.95e-13,1;UBERON:0007914,2.95e-13,1;UBERON:0009292,2.95e-13,1;UBERON:0003099,2.95e-13,1;UBERON:0007375,2.95e-13,1;UBERON:0003323,2.95e-13,1;UBERON:0010258,2.95e-13,1;UBERON:0007842,2.95e-13,1;UBERON:0009494,2.95e-13,1;UBERON:0010042,2.95e-13,1;UBERON:0010045,2.95e-13,1;UBERON:0010259,2.95e-13,1;UBERON:0010359,2.95e-13,1;UBERON:0009526,2.95e-13,1;UBERON:0002397,2.95e-13,1;UBERON:0003113,2.95e-13,1;UBERON:0003277,2.95e-13,1;UBERON:0001709,2.95e-13,1;UBERON:0004066,2.95e-13,1;UBERON:0002244,2.95e-13,1;UBERON:0005620,2.95e-13,1;UBERON:0004362,2.95e-13,1;UBERON:0010364,2.95e-13,1;UBERON:0010046,2.95e-13,1;UBERON:0005868,2.95e-13,1;UBERON:0007238,2.95e-13,1;UBERON:0004288,2.95e-13,1;UBERON:0004068,2.95e-13,1;UBERON:0010334,2.95e-13,1;UBERON:0003852,2.95e-13,1;UBERON:0010253,2.95e-13,1;UBERON:0007195,7.68e-13,1;UBERON:0004457,2.07e-09,12;UBERON:0000042,2.07e-09,12;UBERON:0005253,2.91e-07,2;UBERON:0004089,2.91e-07,2 | |||
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| |||
|short_description=p@chr4:77956674..77956685,+ | |||
}} |
Revision as of 11:49, 13 September 2013
Short description: | p@chr4:77956674..77956685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:77956674..77956685, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 8.55e-17 | 3 |
stromal cell of pancreas | 1.09e-12 | 1 |
skin fibroblast | 2.54e-08 | 23 |
fat cell | 1.04e-07 | 15 |
adipocyte of breast | 2.74e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.27e-10 | 5 |
myotonic disease | 3.27e-10 | 5 |
muscle tissue disease | 3.27e-10 | 5 |
myopathy | 3.27e-10 | 5 |
muscular disease | 3.27e-10 | 5 |
myotonic dystrophy | 3.27e-10 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.