FFCP PHASE1:Hg19::chr4:71108300..71108323,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1448|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2446|TSSclassifier=N|UniProt=P07498|association_with_transcript=0bp_to_ENST00000304954_5end|coexpression_cluster_id=C161|description=CAGE_peak_1_at_CSN3_5end|id=chr4:71108300..71108323,+|ontology_enrichment_celltype=CL:0000077!1.05e-14!19;CL:0000213!1.27e-10!57;CL:0000215!1.27e-10!57;CL:0000076!1.33e-09!62;CL:0002586!3.08e-09!3;CL:0000306!3.97e-07!4;CL:0002222!3.97e-07!4;CL:0000149!3.97e-07!4;CL:0002224!3.97e-07!4;CL:0000342!4.08e-07!1;CL:0002565!4.08e-07!1;CL:0000946!5.19e-07!1;CL:0000786!5.19e-07!1;CL:0000980!5.19e-07!1;CL:0000147!5.75e-07!14|ontology_enrichment_celltype_v019=CL:0002586;6.50e-30;3!CL:0000306;1.00e-22;4!CL:0002222;1.00e-22;4!CL:0000149;1.00e-22;4!CL:0002224;1.00e-22;4!CL:0002097;1.48e-12;2!CL:0000174;8.31e-09;3!CL:0000147;3.44e-07;14|ontology_enrichment_celltype_v019_2=CL:0002586,6.50e-30,3;CL:0000306,1.00e-22,4;CL:0002222,1.00e-22,4;CL:0000149,1.00e-22,4;CL:0002224,1.00e-22,4;CL:0002097,1.48e-12,2;CL:0000174,8.31e-09,3;CL:0000147,3.44e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!3.21e-19!11;UBERON:0000019!6.74e-11!19;UBERON:0000047!6.74e-11!19;UBERON:0004088!6.74e-11!19;UBERON:0003072!6.74e-11!19;UBERON:0003071!6.74e-11!19;UBERON:0004128!6.74e-11!19;UBERON:0000970!2.53e-10!20;UBERON:0002104!8.34e-10!21;UBERON:0001456!8.34e-10!21;UBERON:0001781!3.08e-09!3;UBERON:0001782!3.08e-09!3;UBERON:0005424!3.08e-09!3;UBERON:0000020!6.67e-09!23;UBERON:0001032!1.66e-08!24;UBERON:0004456!1.66e-08!24;UBERON:0006122!1.27e-07!1;UBERON:0002146!3.62e-07!1;UBERON:0005623!3.62e-07!1;UBERON:0010077!3.97e-07!4;UBERON:0005389!3.97e-07!4;UBERON:0000484!3.97e-07!4;UBERON:0002546!3.97e-07!4;UBERON:0000965!3.97e-07!4;UBERON:0001803!3.97e-07!4;UBERON:0003073!3.97e-07!4;UBERON:0005426!3.97e-07!4;UBERON:0002506!4.08e-07!1;UBERON:0001769!4.08e-07!1;UBERON:0001801!5.94e-07!14;UBERON:0005085!6.12e-07!29|ontology_enrichment_uberon_v019=UBERON:0007625;5.87e-32;11!UBERON:0001781;6.50e-30;3!UBERON:0001782;6.50e-30;3!UBERON:0010077;1.00e-22;4!UBERON:0005389;1.00e-22;4!UBERON:0000484;1.00e-22;4!UBERON:0000965;1.00e-22;4!UBERON:0001803;1.00e-22;4!UBERON:0000019;9.67e-19;19!UBERON:0000047;9.67e-19;19!UBERON:0004088;9.67e-19;19!UBERON:0010230;9.67e-19;19!UBERON:0000966;2.11e-18;5!UBERON:0005388;2.11e-18;5!UBERON:0001802;2.11e-18;5!UBERON:0000970;7.89e-18;20!UBERON:0002104;5.28e-17;21!UBERON:0001456;5.28e-17;21!UBERON:0000020;1.44e-15;23!UBERON:0001032;6.14e-15;24!UBERON:0004456;6.14e-15;24!UBERON:0010371;1.49e-11;31!UBERON:0000033;2.09e-09;50!UBERON:0002369;8.31e-09;3!UBERON:0001235;8.31e-09;3!UBERON:0006858;8.31e-09;3!UBERON:0007811;4.39e-08;52!UBERON:0001444;5.07e-08;48!UBERON:0000153;2.91e-07;54!UBERON:0001801;3.44e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0007625,5.87e-32,11;UBERON:0001782,6.50e-30,3;UBERON:0005424,6.50e-30,3;UBERON:0010077,1.00e-22,4;UBERON:0005389,1.00e-22,4;UBERON:0001781,1.00e-22,4;UBERON:0000484,1.00e-22,4;UBERON:0002546,1.00e-22,4;UBERON:0000965,1.00e-22,4;UBERON:0001803,1.00e-22,4;UBERON:0003073,1.00e-22,4;UBERON:0005426,1.00e-22,4;UBERON:0000019,7.89e-18,20;UBERON:0000047,7.89e-18,20;UBERON:0010312,7.89e-18,20;UBERON:0004088,7.89e-18,20;UBERON:0010230,7.89e-18,20;UBERON:0003072,7.89e-18,20;UBERON:0004128,7.89e-18,20;UBERON:0003071,7.89e-18,20;UBERON:0000970,5.28e-17,21;UBERON:0002104,5.28e-17,21;UBERON:0001456,2.97e-16,22;UBERON:0000966,1.63e-15,6;UBERON:0005388,1.63e-15,6;UBERON:0001802,1.63e-15,6;UBERON:0000020,6.14e-15,24;UBERON:0001032,6.14e-15,24;UBERON:0004456,6.14e-15,24;UBERON:0000076,6.88e-12,8;UBERON:0005085,1.16e-11,31;UBERON:0001444,2.30e-11,49;UBERON:0000033,5.77e-10,56;UBERON:0000153,5.15e-09,62;UBERON:0007811,5.15e-09,62;UBERON:0002369,8.31e-09,3;UBERON:0001235,8.31e-09,3;UBERON:0006858,8.31e-09,3;UBERON:0001801,3.44e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,1.6437217193015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96808787419823,1.301513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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1448 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2446 | |||
|TSSclassifier=N | |||
|UniProt=P07498 | |||
|association_with_transcript=0bp_to_ENST00000304954_5end | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_1_at_CSN3_5end | |||
|id=chr4:71108300..71108323,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.05e-14!19;CL:0000213!1.27e-10!57;CL:0000215!1.27e-10!57;CL:0000076!1.33e-09!62;CL:0002586!3.08e-09!3;CL:0000306!3.97e-07!4;CL:0002222!3.97e-07!4;CL:0000149!3.97e-07!4;CL:0002224!3.97e-07!4;CL:0000342!4.08e-07!1;CL:0002565!4.08e-07!1;CL:0000946!5.19e-07!1;CL:0000786!5.19e-07!1;CL:0000980!5.19e-07!1;CL:0000147!5.75e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.50e-30;3!CL:0000306;1.00e-22;4!CL:0002222;1.00e-22;4!CL:0000149;1.00e-22;4!CL:0002224;1.00e-22;4!CL:0002097;1.48e-12;2!CL:0000174;8.31e-09;3!CL:0000147;3.44e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.50e-30,3;CL:0000306,1.00e-22,4;CL:0002222,1.00e-22,4;CL:0000149,1.00e-22,4;CL:0002224,1.00e-22,4;CL:0002097,1.48e-12,2;CL:0000174,8.31e-09,3;CL:0000147,3.44e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!3.21e-19!11;UBERON:0000019!6.74e-11!19;UBERON:0000047!6.74e-11!19;UBERON:0004088!6.74e-11!19;UBERON:0003072!6.74e-11!19;UBERON:0003071!6.74e-11!19;UBERON:0004128!6.74e-11!19;UBERON:0000970!2.53e-10!20;UBERON:0002104!8.34e-10!21;UBERON:0001456!8.34e-10!21;UBERON:0001781!3.08e-09!3;UBERON:0001782!3.08e-09!3;UBERON:0005424!3.08e-09!3;UBERON:0000020!6.67e-09!23;UBERON:0001032!1.66e-08!24;UBERON:0004456!1.66e-08!24;UBERON:0006122!1.27e-07!1;UBERON:0002146!3.62e-07!1;UBERON:0005623!3.62e-07!1;UBERON:0010077!3.97e-07!4;UBERON:0005389!3.97e-07!4;UBERON:0000484!3.97e-07!4;UBERON:0002546!3.97e-07!4;UBERON:0000965!3.97e-07!4;UBERON:0001803!3.97e-07!4;UBERON:0003073!3.97e-07!4;UBERON:0005426!3.97e-07!4;UBERON:0002506!4.08e-07!1;UBERON:0001769!4.08e-07!1;UBERON:0001801!5.94e-07!14;UBERON:0005085!6.12e-07!29 | |||
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|short_description=p1@CSN3 | |||
}} |
Revision as of 11:27, 13 September 2013
Short description: | p1@CSN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CSN3_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | 0bp_to_ENST00000304954_5end |
EntrezGene: | CSN3 |
HGNC: | 2446 |
UniProt: | P07498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.50e-30 | 3 |
crystallin accumulating cell | 1.00e-22 | 4 |
vertebrate lens cell | 1.00e-22 | 4 |
visual pigment cell | 1.00e-22 | 4 |
lens epithelial cell | 1.00e-22 | 4 |
cortical cell of adrenal gland | 1.48e-12 | 2 |
steroid hormone secreting cell | 8.31e-09 | 3 |
pigment cell | 3.44e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.