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FFCP PHASE1:Mm9::chr15:67008309..67008353,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20442|HGNC=|UniProt=|association_with_transcript=-21bp_to_uc007wbc.1_5end|description=CAGE_peak_2_at_St3gal1_5end|id=chr15:67008309..67008353,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!9.20e-13!70;UBERON:0002365!1.34e-11!25;UBERON:0002330!1.34e-11!25;UBERON:0005057!1.39e-11!51;UBERON:0003914!3.96e-11!47;UBERON:0009854!1.48e-10!23;UBERON:0009856!1.48e-10!23;UBERON:0000926!2.05e-10!193;UBERON:0004120!2.05e-10!193;UBERON:0006603!2.05e-10!193;UBERON:0002107!3.55e-10!22;UBERON:0007499!3.55e-10!22;UBERON:0006925!3.55e-10!22;UBERON:0009497!3.55e-10!22;UBERON:0000015!3.55e-10!22;UBERON:0002423!3.55e-10!22;UBERON:0006235!3.55e-10!22;UBERON:0008835!3.55e-10!22;UBERON:0003894!3.55e-10!22;UBERON:0004161!3.55e-10!22;UBERON:0008836!3.55e-10!22;UBERON:0003081!3.66e-10!88;UBERON:0005256!4.41e-09!47;UBERON:0009569!2.98e-08!66;UBERON:0005172!9.39e-08!49;UBERON:0005173!9.39e-08!49;UBERON:0002417!9.39e-08!49;UBERON:0000916!9.39e-08!49;UBERON:0003104!2.79e-07!131;UBERON:0009142!2.79e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.34e-11,25;UBERON:0002330,1.34e-11,25;UBERON:0003914,3.96e-11,47;UBERON:0009854,1.48e-10,23;UBERON:0009856,1.48e-10,23;UBERON:0002107,3.55e-10,22;UBERON:0007499,3.55e-10,22;UBERON:0006925,3.55e-10,22;UBERON:0009497,3.55e-10,22;UBERON:0000015,3.55e-10,22;UBERON:0002423,3.55e-10,22;UBERON:0006235,3.55e-10,22;UBERON:0008835,3.55e-10,22;UBERON:0003894,3.55e-10,22;UBERON:0004161,3.55e-10,22;UBERON:0008836,3.55e-10,22;UBERON:0003081,1.13e-09,87;UBERON:0005256,1.81e-09,45;UBERON:0001041,5.82e-09,80;UBERON:0001048,2.53e-08,134;UBERON:0009569,2.98e-08,66;UBERON:0003104,7.76e-08,61;UBERON:0009142,7.76e-08,61;UBERON:0005172,9.39e-08,49;UBERON:0005173,9.39e-08,49;UBERON:0002417,9.39e-08,49;UBERON:0000916,9.39e-08,49;UBERON:0000926,3.10e-07,120;UBERON:0004120,3.10e-07,120;UBERON:0006603,3.10e-07,120|phase1_expression=11.2104192973356,6.63053274514786,2.27499619694768,0.30246421130683,0,6.5472916045637,8.87728034262997,22.9839515726006,39.9839970910734,66.2402609491241,20.3749382188351,18.9857738408901,34.2401459862411,34.88074056518,28.9805492779627,38.0653502692873,46.8706458345858,25.0792421459799,29.7538320924453,38.6194583136207,9.43980520676875,5.06383851124515,6.52999472847338,5.75972722056264,4.12936705920906,5.7423196411502,4.73838195774982,5.17130958446134,4.3705386474966,2.01624103807945,3.99114919179548,15.2407361630311,16.6067492647834,0,2.02196133825892,2.82598897109437,0.816677425049476,22.1821764290561,15.626706890476,20.4174260149781,19.9998705930545,18.442228093878,16.9928623560904,29.9634426781874,29.2979331224397,34.3232426542344,8.60630478782843,8.50298109883741,10.3252505885202,13.026803237977,13.5786828976602,5.75010257459886,18.7916518784665,24.6623128283857,14.1159395639835,11.0621557495457,18.9112070359579,19.0798674142654,2.22548106945558,2.11596391708813,3.1691570175309,6.43804610931351,12.450127145556,17.5480444869873,19.7773272513395,23.4458437932213,10.4860038681442,6.14749288514487,9.7468235569969,10.5304631898719,11.1472229516232,3.71346279724945,6.62605622854841,5.63457676388789,6.90087391331302,12.8690630125403,4.40463523997555,4.21368215681119,3.68655679814984,3.95658863190582,3.84248103130121,4.68822033501084,2.79182999001381,4.50210088025344,3.66715794664344,7.66034322231536,6.40672563595963,6.15118171223492,3.55913108665965,10.8823046553771,34.7837386442013,23.2314446784974,15.6393406752783,19.9690180905992,18.1937396885347,23.7454250161588,12.2186645514624,15.8500199997594,16.8860902991865,15.546941278455,12.2533775205712,20.5322363862909,25.4805239706646,7.11066703153331,3.030874574157,3.54703811665138,2.52762222507392,11.3042040921869,51.0107630784928,7.86743337043571,12.6644288539279,18.5723941770406,16.6043158024362,15.6751546174727,16.1096528775916,9.42499434972566,41.2815596116404,31.3780604516208,33.6152009740952,22.6473589926373,24.9550915860245,31.5168914537894,24.2309289583559,2.04946557908083,1.25668024088073,8.43008282188352,17.8524535513821,10.1983464268879,13.2153036155987,7.78911324905078,5.03250663100489,4.64921102817598,8.69121600961382,7.41574826257959,7.06479351502504,4.38051410282946,9.3692214742291,32.5946262998444,18.1960386072246,15.1518136238261,14.3132487258974,9.65588838620586,10.2635413989049,11.6042709733501,10.6136938676071,11.5302348256365,8.80796210861451,33.114031454594,8.62271971731369,11.1572587299013,13.724187684788,8.11024209982027,14.4584569597311,23.3328951569852,16.6683530490434,15.723707078661,13.3420505589515,7.46308930632674,9.09323198065896,15.3273071676271,15.7132460187334,10.4435995647389,16.5721314909647,12.0026181365916,11.7243005794407,15.8123082430277,12.0723030629829,10.8591768401468,12.671108443338,16.2525789438304,16.2137619091711,15.0585987048092,18.8813099150304,20.3993756515765,8.20130799400096,4.11618449517138,5.61711931072457,3.17340679996253,13.0105832826493,11.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|EntrezGene=20442
|HGNC=
|UniProt=
|association_with_transcript=-21bp_to_uc007wbc.1_5end
|description=CAGE_peak_2_at_St3gal1_5end
|id=chr15:67008309..67008353,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!9.20e-13!70;UBERON:0002365!1.34e-11!25;UBERON:0002330!1.34e-11!25;UBERON:0005057!1.39e-11!51;UBERON:0003914!3.96e-11!47;UBERON:0009854!1.48e-10!23;UBERON:0009856!1.48e-10!23;UBERON:0000926!2.05e-10!193;UBERON:0004120!2.05e-10!193;UBERON:0006603!2.05e-10!193;UBERON:0002107!3.55e-10!22;UBERON:0007499!3.55e-10!22;UBERON:0006925!3.55e-10!22;UBERON:0009497!3.55e-10!22;UBERON:0000015!3.55e-10!22;UBERON:0002423!3.55e-10!22;UBERON:0006235!3.55e-10!22;UBERON:0008835!3.55e-10!22;UBERON:0003894!3.55e-10!22;UBERON:0004161!3.55e-10!22;UBERON:0008836!3.55e-10!22;UBERON:0003081!3.66e-10!88;UBERON:0005256!4.41e-09!47;UBERON:0009569!2.98e-08!66;UBERON:0005172!9.39e-08!49;UBERON:0005173!9.39e-08!49;UBERON:0002417!9.39e-08!49;UBERON:0000916!9.39e-08!49;UBERON:0003104!2.79e-07!131;UBERON:0009142!2.79e-07!131
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.34e-11,25;UBERON:0002330,1.34e-11,25;UBERON:0003914,3.96e-11,47;UBERON:0009854,1.48e-10,23;UBERON:0009856,1.48e-10,23;UBERON:0002107,3.55e-10,22;UBERON:0007499,3.55e-10,22;UBERON:0006925,3.55e-10,22;UBERON:0009497,3.55e-10,22;UBERON:0000015,3.55e-10,22;UBERON:0002423,3.55e-10,22;UBERON:0006235,3.55e-10,22;UBERON:0008835,3.55e-10,22;UBERON:0003894,3.55e-10,22;UBERON:0004161,3.55e-10,22;UBERON:0008836,3.55e-10,22;UBERON:0003081,1.13e-09,87;UBERON:0005256,1.81e-09,45;UBERON:0001041,5.82e-09,80;UBERON:0001048,2.53e-08,134;UBERON:0009569,2.98e-08,66;UBERON:0003104,7.76e-08,61;UBERON:0009142,7.76e-08,61;UBERON:0005172,9.39e-08,49;UBERON:0005173,9.39e-08,49;UBERON:0002417,9.39e-08,49;UBERON:0000916,9.39e-08,49;UBERON:0000926,3.10e-07,120;UBERON:0004120,3.10e-07,120;UBERON:0006603,3.10e-07,120
|phase1_expression=11.2104192973356,6.63053274514786,2.27499619694768,0.30246421130683,0,6.5472916045637,8.87728034262997,22.9839515726006,39.9839970910734,66.2402609491241,20.3749382188351,18.9857738408901,34.2401459862411,34.88074056518,28.9805492779627,38.0653502692873,46.8706458345858,25.0792421459799,29.7538320924453,38.6194583136207,9.43980520676875,5.06383851124515,6.52999472847338,5.75972722056264,4.12936705920906,5.7423196411502,4.73838195774982,5.17130958446134,4.3705386474966,2.01624103807945,3.99114919179548,15.2407361630311,16.6067492647834,0,2.02196133825892,2.82598897109437,0.816677425049476,22.1821764290561,15.626706890476,20.4174260149781,19.9998705930545,18.442228093878,16.9928623560904,29.9634426781874,29.2979331224397,34.3232426542344,8.60630478782843,8.50298109883741,10.3252505885202,13.026803237977,13.5786828976602,5.75010257459886,18.7916518784665,24.6623128283857,14.1159395639835,11.0621557495457,18.9112070359579,19.0798674142654,2.22548106945558,2.11596391708813,3.1691570175309,6.43804610931351,12.450127145556,17.5480444869873,19.7773272513395,23.4458437932213,10.4860038681442,6.14749288514487,9.7468235569969,10.5304631898719,11.1472229516232,3.71346279724945,6.62605622854841,5.63457676388789,6.90087391331302,12.8690630125403,4.40463523997555,4.21368215681119,3.68655679814984,3.95658863190582,3.84248103130121,4.68822033501084,2.79182999001381,4.50210088025344,3.66715794664344,7.66034322231536,6.40672563595963,6.15118171223492,3.55913108665965,10.8823046553771,34.7837386442013,23.2314446784974,15.6393406752783,19.9690180905992,18.1937396885347,23.7454250161588,12.2186645514624,15.8500199997594,16.8860902991865,15.546941278455,12.2533775205712,20.5322363862909,25.4805239706646,7.11066703153331,3.030874574157,3.54703811665138,2.52762222507392,11.3042040921869,51.0107630784928,7.86743337043571,12.6644288539279,18.5723941770406,16.6043158024362,15.6751546174727,16.1096528775916,9.42499434972566,41.2815596116404,31.3780604516208,33.6152009740952,22.6473589926373,24.9550915860245,31.5168914537894,24.2309289583559,2.04946557908083,1.25668024088073,8.43008282188352,17.8524535513821,10.1983464268879,13.2153036155987,7.78911324905078,5.03250663100489,4.64921102817598,8.69121600961382,7.41574826257959,7.06479351502504,4.38051410282946,9.3692214742291,32.5946262998444,18.1960386072246,15.1518136238261,14.3132487258974,9.65588838620586,10.2635413989049,11.6042709733501,10.6136938676071,11.5302348256365,8.80796210861451,33.114031454594,8.62271971731369,11.1572587299013,13.724187684788,8.11024209982027,14.4584569597311,23.3328951569852,16.6683530490434,15.723707078661,13.3420505589515,7.46308930632674,9.09323198065896,15.3273071676271,15.7132460187334,10.4435995647389,16.5721314909647,12.0026181365916,11.7243005794407,15.8123082430277,12.0723030629829,10.8591768401468,12.671108443338,16.2525789438304,16.2137619091711,15.0585987048092,18.8813099150304,20.3993756515765,8.20130799400096,4.11618449517138,5.61711931072457,3.17340679996253,13.0105832826493,11.3795969211615,7.7320476793256,10.8909103296605,11.3412802360884,15.2180500890047,20.404749646414,21.7402620235694,19.3528110776208,19.6966907320739,20.8611573217459,22.4704852163555,20.533114738096,11.948476395262,13.0870851657626,16.2232887905815,9.01661885384643,14.255592949172,9.30971938404604,9.39819986530269,9.48548056863859,5.31396532726568,7.69293766422737,5.79966670432462,28.7559048274534,25.6941462802785,25.7492283598296,28.3326261604916,34.0805003932685,30.3883221288045,28.0088436959562,25.6049562331221,23.023202202055,24.1614043605512,25.8782771749238,26.4220072844637,29.6435789458833,34.8558851567014,35.5206878773386,23.639732546805,36.7658848431543,9.66406200029472,12.87423313892,11.3729207469376,11.7345124144251,12.0604505358107,15.2347930167049,21.8549685600735,24.9063527687782,26.7972274475018,25.0343986792255,35.8860659227466,37.2999560830334,24.87963807602,21.1107797514981,11.4220193601929,37.8658490224658,31.1808523324348,10.9174401191699,7.03270119553219,13.4426655208874,14.1383719234449,13.2513452154828,9.37052986311932,14.6487910458303,11.4705023017225,19.3834846451683,19.2492040936406,8.50102473517278,10.5212108848072,13.4397844501818,12.2102100240287,16.4650498841592,11.3961986347043,12.5422958702254,20.6212653715669,5.30980553359851,8.98288353773431,6.65111825322452,6.22396763194464,12.1073776081117,9.22305443831782,16.2809824695979,6.5436071305951,12.1209108650805,9.7971394960103,2.10837217149998,7.21948802737308,16.000661470428,8.10274923140896,7.89087971074802,7.28745919107414,9.22169214939823,11.4156043265325,10.3665882979336,9.43841342255258,15.0189893160775,17.5820618816971,3.08739757276947,9.72828892354732,10.333723308538,11.0975781867807,8.23669173621642,9.52017218521355,30.3140070095045,7.78786268444141,42.7177201994632,24.147263551697,26.6680119412385,54.4384840743557,54.267608405247,34.7742823273914,31.6159879788571,25.8910186798767,30.6803941845821,11.4560474161814,9.64824780422463,10.3692928234693,9.72048067396211,8.15444354456428,6.76923947613151,9.30563990055263,10.4969888771177,6.80565449158477,12.9614973291793,20.5041973318685,1.69107881605257,13.3069725979141,8.43838301331198,10.3059129822345,7.36210993823067,9.46154302748358,6.10257640957921,6.51021924219751,4.29923312145414,2.41584120826006,3.74439008135225,11.0603892219862,9.12263468805739,16.0229093177131,8.18501184760109,11.9947886097213,12.715606706001,11.8993495024769,12.4059202826645,10.9043765943999,8.76378276532498,10.8892279947788,14.0339348265243,10.6795144220766,12.739582337791,10.4295976462997,3.10780334723691,4.48569283047379,5.20442310728643,15.4551675225752,30.2168785476403,23.4434079062099,13.7195762610602,4.51414893631827,2.25900737046827,7.36520378411483,7.44764167471216,3.26521046453006,1.37016503954128,5.2877572817279,6.75022500231806,1.80128481289688,5.43770890781046,4.65984280576638,4.04770655578289,11.5717213286299,11.7806187970353,14.8295097411659,8.80375283037526,8.45680138870065,16.0017644017163,16.6888396363504,18.9342333659171,12.8875577999537,20.7853025909997,13.9583492625696,14.0462261204824,16.7745899300758,19.4706239759529,11.4310485907938,14.3696564171621,15.6256468575601,16.8955219329356,18.1054671765309,16.1148548621145,15.9728225543404,11.921809497366,15.6974129962915,16.6573603335135,16.4152339309852,15.5488776941857,16.0472523977084,16.1606895476576,14.5896990631012,13.0498519936592,15.2681947682123,17.187703813127,15.1838104362247,14.8538090455479,16.7373087218424,18.9484602840781,15.4707158914775,17.5985265503336,16.3237650148441,17.8538233427725
|short_description=p2@St3gal1
}}

Revision as of 10:46, 13 September 2013

Short description:p2@St3gal1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_St3gal1_5end
Coexpression cluster:NA
Association with transcript: -21bp_to_uc007wbc.1_5end
EntrezGene:St3gal1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@St3gal1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E739.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F266.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.99
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A338.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A546.87
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.08
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A638.62
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D929.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B334.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.79
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.08
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D223.45
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F910.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F723.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.89
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.30
accessory axillary lymph node, adult.CNhs10475.1063-29H951.01
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C512.66
adrenal gland, embryo E16.CNhs11004.1254-43D618.57
adrenal gland, embryo E17.CNhs11043.1263-45I116.60
adrenal gland, embryo E18.CNhs11026.1262-18F515.68
adrenal gland, neonate N00.CNhs11191.1311-23C116.11
adrenal gland, neonate N25.CNhs11223.1377-27I39.42
amnion, adult pregnant day17.5.CNhs10488.583-22A841.28
aorta, adult.CNhs10498.46-23H131.38
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F522.65
bone (os femoris), neonate N16.CNhs11225.1525-43A624.96
bone (os femoris), neonate N20.CNhs11195.1350-25C331.52
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.85
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.22
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D58.69
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.59
epididymis, adult.CNhs10490.58-23B218.20
eyeball, adult.CNhs10484.31-12G415.15
eyeball, embryo E12.CNhs11016.345-16C614.31
eyeball, embryo E14.CNhs10521.399-16E29.66
eyeball, embryo E15.CNhs10593.426-16C910.26
eyeball, embryo E17.CNhs11023.1261-18D411.60
eyeball, neonate N00.CNhs11207.633-15C610.61
eyeball, neonate N01.CNhs11140.1532-43E711.53
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A233.11
forelimb, embryo E11.CNhs10596.335-25E28.62
forelimb, embryo E12.CNhs10600.359-14H211.16
forelimb, embryo E13.CNhs10589.384-1E213.72
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C423.33
forelimb, embryo E18.CNhs11008.1520-43B516.67
gonad, embryo E13.CNhs11044.1564-45I615.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F515.71
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C812.00
heart, embryo E16.CNhs11021.457-17C611.72
heart, embryo E17.CNhs11025.479-18E515.81
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E310.86
heart, neonate N03.CNhs11221.1349-25I212.67
heart, neonate N10.CNhs11118.749-24G116.25
heart, neonate N16.CNhs11209.782-15G116.21
heart, neonate N20.CNhs11127.821-26I615.06
heart, neonate N25.CNhs11196.1351-25D318.88
heart, neonate N30.CNhs11202.1390-42D220.40
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D511.38
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D311.34
intestine, embryo E18.CNhs10526.1289-20F715.22
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E921.74
intestine, neonate N06.CNhs11102.688-20B819.35
intestine, neonate N07.CNhs11095.720-20F219.70
intestine, neonate N10.CNhs11098.755-23A520.86
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E320.53
intestine, neonate N30.CNhs11131.1384-42G111.95
kidney, embryo E14.CNhs10606.411-4I913.09
kidney, embryo E15.CNhs10997.434-16F816.22
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G79.40
kidney, neonate N10.CNhs11206.758-6D59.49
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B228.76
liver, embryo E12.CNhs10601.355-15F825.69
liver, embryo E13.CNhs10524.378-3H625.75
liver, embryo E14.CNhs10594.409-16E128.33
liver, embryo E15.CNhs10520.433-16D734.08
liver, embryo E16.CNhs10523.462-17F530.39
liver, embryo E17.CNhs10510.481-18A328.01
liver, embryo E18.CNhs10579.499-43G425.60
liver, neonate N00.CNhs11117.641-24F423.02
liver, neonate N03.CNhs11123.1345-25G224.16
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H226.42
liver, neonate N10.CNhs11115.751-24B929.64
liver, neonate N20.CNhs11220.823-25A334.86
liver, neonate N25.CNhs11198.1368-26H135.52
liver, neonate N30.CNhs11106.1382-42D123.64
lung, adult.CNhs10474.28-22B136.77
lung, embryo E12.CNhs10522.354-16G29.66
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C511.37
lung, embryo E16.CNhs10998.458-17B611.73
lung, embryo E17.CNhs10605.480-44A612.06
lung, embryo E18.CNhs10583.1287-20I615.23
lung, neonate N00.CNhs11224.640-42C621.85
lung, neonate N06.CNhs11212.683-20E524.91
lung, neonate N07.CNhs11111.715-19A326.80
lung, neonate N10.CNhs11219.750-23E625.03
lung, neonate N20.CNhs11109.822-18A435.89
lung, neonate N25.CNhs11119.1359-25C737.30
lung, neonate N30.CNhs11133.1394-42H224.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B637.87
mammary gland, adult pregnant day19.CNhs10476.588-5H231.18
medulla oblongata, adult.CNhs10477.17-12C210.92
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.47
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I716.47
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I412.54
oviduct, adult pregnant day01.CNhs10500.988-6G620.62
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G916.28
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G816.00
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G317.58
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C39.73
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H311.10
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C49.52
small intestine, neonate N16.CNhs11114.790-21I130.31
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G242.72
spleen, embryo E16.CNhs11035.461-43C124.15
spleen, embryo E18.CNhs11011.1271-21F226.67
spleen, neonate N10.CNhs11116.752-24D154.44
spleen, neonate N20.CNhs11112.824-19H154.27
spleen, neonate N25.CNhs11099.1354-25G334.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C631.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D330.68
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B89.31
stomach, neonate N07.CNhs11210.718-18A910.50
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I112.96
submandibular gland, adult.CNhs10469.59-29C120.50
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F513.31
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I49.12
thymus, embryo E15.CNhs11005.430-45I216.02
thymus, embryo E16.CNhs11002.456-26C58.19
thymus, embryo E17.CNhs10581.478-18C111.99
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F811.90
thymus, neonate N03.CNhs11137.2104-43C712.41
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D38.76
thymus, neonate N10.CNhs11194.748-24E410.89
thymus, neonate N20.CNhs11186.820-7A214.03
thymus, neonate N25.CNhs11125.1362-25G710.68
thymus, neonate N30.CNhs11132.1393-42G212.74
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E415.46
uterus, adult pregnant day19.CNhs10497.590-15F530.22
uterus, adult.CNhs10509.92-27E523.44
vagina, adult.CNhs10502.89-27D513.72
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H211.78
whole body, embryo E14.5.CNhs10578.420-27D214.83
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.18
whole body, embryo E17.5.CNhs10513.490-9F914.85
whole body, embryo E17.CNhs10517.475-3I516.74
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C617.60
whole body, neonate N06.CNhs10515.692-21D116.32
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland1.34e-1125
exocrine system1.34e-1125
epithelial tube3.96e-1147
digestive tract diverticulum1.48e-1023
sac1.48e-1023
liver3.55e-1022
epithelial sac3.55e-1022
digestive gland3.55e-1022
epithelium of foregut-midgut junction3.55e-1022
anatomical boundary3.55e-1022
hepatobiliary system3.55e-1022
foregut-midgut junction3.55e-1022
hepatic diverticulum3.55e-1022
liver primordium3.55e-1022
septum transversum3.55e-1022
liver bud3.55e-1022
lateral plate mesoderm1.13e-0987
trunk mesenchyme1.81e-0945
foregut5.82e-0980
primordium2.53e-08134
subdivision of trunk2.98e-0866
mesenchyme7.76e-0861
entire embryonic mesenchyme7.76e-0861
abdomen element9.39e-0849
abdominal segment element9.39e-0849
abdominal segment of trunk9.39e-0849
abdomen9.39e-0849
mesoderm3.10e-07120
mesoderm-derived structure3.10e-07120
presumptive mesoderm3.10e-07120







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