FFCP PHASE1:Mm9::chr15:44579907..44579923,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319613|HGNC=|MCL_coexpression_id=596|UniProt=Q8BHS8|association_with_transcript=294bp_to_uc007vqd.1_5end|description=CAGE_peak_7_at_Sybu_5end|id=chr15:44579907..44579923,-|ontology_enrichment_celltype=CL:0000117!4.91e-16!23;CL:0000337!4.91e-16!23;CL:0000540!1.42e-08!33;CL:0000047!1.42e-08!33;CL:0000031!1.42e-08!33;CL:0000404!1.42e-08!33;CL:0000221!5.92e-07!44;CL:0000133!5.92e-07!44;CL:0000393!5.99e-07!39;CL:0000211!5.99e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-29,23;CL:0000337,1.09e-29,23;CL:0000540,6.36e-19,33;CL:0000047,6.36e-19,33;CL:0000031,6.36e-19,33;CL:0000404,6.36e-19,33;CL:0000393,3.89e-15,39;CL:0000211,3.89e-15,39;CL:0002319,3.29e-13,43;CL:0000221,8.77e-13,44;CL:0000133,8.77e-13,44;CL:0002609,3.28e-09,6;CL:0002321,8.32e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.97e-23!52;UBERON:0005068!2.97e-23!52;UBERON:0006241!2.97e-23!52;UBERON:0007135!2.97e-23!52;UBERON:0000955!1.54e-21!50;UBERON:0006238!1.54e-21!50;UBERON:0002616!6.10e-21!49;UBERON:0002020!1.27e-20!34;UBERON:0000033!4.20e-20!63;UBERON:0000073!8.30e-20!75;UBERON:0001016!8.30e-20!75;UBERON:0001017!1.37e-19!73;UBERON:0005743!1.37e-19!73;UBERON:0004121!1.22e-18!102;UBERON:0000924!1.22e-18!102;UBERON:0006601!1.22e-18!102;UBERON:0002346!2.74e-17!71;UBERON:0003075!2.74e-17!71;UBERON:0007284!2.74e-17!71;UBERON:0002791!1.34e-16!29;UBERON:0003528!1.34e-16!29;UBERON:0001893!1.34e-16!29;UBERON:0003080!1.55e-16!40;UBERON:0002780!7.39e-16!39;UBERON:0001890!7.39e-16!39;UBERON:0006240!7.39e-16!39;UBERON:0003056!3.33e-14!49;UBERON:0000956!4.69e-12!21;UBERON:0001869!4.69e-12!21;UBERON:0000203!4.69e-12!21;UBERON:0004111!1.29e-11!122;UBERON:0000025!2.14e-11!114;UBERON:0002619!1.12e-09!17;UBERON:0007811!3.24e-09!86;UBERON:0002021!3.13e-08!10;UBERON:0000411!3.13e-08!10;UBERON:0001950!3.13e-08!10;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12;UBERON:0000153!2.10e-07!94;UBERON:0000475!4.94e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-40,54;UBERON:0001049,7.46e-37,52;UBERON:0005068,7.46e-37,52;UBERON:0006241,7.46e-37,52;UBERON:0007135,7.46e-37,52;UBERON:0001017,1.11e-36,73;UBERON:0001016,2.03e-35,75;UBERON:0002020,3.39e-35,34;UBERON:0000955,9.39e-29,47;UBERON:0006238,9.39e-29,47;UBERON:0002346,3.64e-28,64;UBERON:0003075,3.64e-28,64;UBERON:0007284,3.64e-28,64;UBERON:0002616,1.45e-27,46;UBERON:0004121,3.75e-27,95;UBERON:0000924,3.75e-27,95;UBERON:0006601,3.75e-27,95;UBERON:0003528,1.18e-26,29;UBERON:0002791,1.18e-26,29;UBERON:0001893,1.18e-26,29;UBERON:0010371,1.57e-23,73;UBERON:0003080,2.08e-23,40;UBERON:0002780,4.55e-22,39;UBERON:0001890,4.55e-22,39;UBERON:0006240,4.55e-22,39;UBERON:0000956,2.75e-20,21;UBERON:0001869,2.75e-20,21;UBERON:0000203,2.75e-20,21;UBERON:0003056,8.04e-18,49;UBERON:0010314,9.67e-17,92;UBERON:0002619,3.70e-15,17;UBERON:0002021,3.51e-14,10;UBERON:0000411,3.51e-14,10;UBERON:0001950,3.51e-14,10;UBERON:0003076,4.36e-14,12;UBERON:0003057,4.36e-14,12;UBERON:0000025,1.26e-12,114;UBERON:0004111,4.92e-12,122;UBERON:0002240,3.38e-11,6;UBERON:0005174,3.38e-11,6;UBERON:0001137,3.38e-11,6;UBERON:0001948,4.51e-10,5;UBERON:0002315,4.51e-10,5;UBERON:0011216,3.95e-09,194;UBERON:0002420,1.88e-07,8;UBERON:0007245,1.88e-07,8;UBERON:0010009,1.88e-07,8;UBERON:0010011,1.88e-07,8;UBERON:0000454,1.88e-07,8;UBERON:0002950,2.60e-07,4;UBERON:0001891,2.60e-07,4;UBERON:0009616,2.60e-07,4;UBERON:0010286,2.60e-07,4|phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,3.80298842103708,0,0,0,0,0,0,0,1.34796496001021,1.4850653216486,2.10324961351382,2.57085885963423,4.19650227808066,1.22490799214954,1.0543001812006,2.75765635983006,2.20231761998777,4.59674417106676,2.30409799884365,0.395658863190582,1.82975287204819,0.52091337055676,1.3959149950069,2.25105044012672,2.59757021220577,4.12480019663135,4.41352210477219,1.86399445825301,0.302904773332736,0.0755715601067855,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,3.80615036115011,8.3778682725382,0.255457055208591,0,0,0,2.24685959107234,2.74500361691176,2.01046963380583,1.56441888173049,3.83573185995496,2.49345653471472,1.46017136760982,0,0.124406970610093,0,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,1.05144974282064,0.720332286654991,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0.949058123089023,0,0,0.198956472041151,0,0.898819408654221,0.21613804987469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| ||
|EntrezGene=319613 | |||
|HGNC= | |||
|MCL_coexpression_id=596 | |||
|UniProt=Q8BHS8 | |||
|association_with_transcript=294bp_to_uc007vqd.1_5end | |||
|description=CAGE_peak_7_at_Sybu_5end | |||
|id=chr15:44579907..44579923,- | |||
|ontology_enrichment_celltype=CL:0000117!4.91e-16!23;CL:0000337!4.91e-16!23;CL:0000540!1.42e-08!33;CL:0000047!1.42e-08!33;CL:0000031!1.42e-08!33;CL:0000404!1.42e-08!33;CL:0000221!5.92e-07!44;CL:0000133!5.92e-07!44;CL:0000393!5.99e-07!39;CL:0000211!5.99e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-29,23;CL:0000337,1.09e-29,23;CL:0000540,6.36e-19,33;CL:0000047,6.36e-19,33;CL:0000031,6.36e-19,33;CL:0000404,6.36e-19,33;CL:0000393,3.89e-15,39;CL:0000211,3.89e-15,39;CL:0002319,3.29e-13,43;CL:0000221,8.77e-13,44;CL:0000133,8.77e-13,44;CL:0002609,3.28e-09,6;CL:0002321,8.32e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-23!52;UBERON:0005068!2.97e-23!52;UBERON:0006241!2.97e-23!52;UBERON:0007135!2.97e-23!52;UBERON:0000955!1.54e-21!50;UBERON:0006238!1.54e-21!50;UBERON:0002616!6.10e-21!49;UBERON:0002020!1.27e-20!34;UBERON:0000033!4.20e-20!63;UBERON:0000073!8.30e-20!75;UBERON:0001016!8.30e-20!75;UBERON:0001017!1.37e-19!73;UBERON:0005743!1.37e-19!73;UBERON:0004121!1.22e-18!102;UBERON:0000924!1.22e-18!102;UBERON:0006601!1.22e-18!102;UBERON:0002346!2.74e-17!71;UBERON:0003075!2.74e-17!71;UBERON:0007284!2.74e-17!71;UBERON:0002791!1.34e-16!29;UBERON:0003528!1.34e-16!29;UBERON:0001893!1.34e-16!29;UBERON:0003080!1.55e-16!40;UBERON:0002780!7.39e-16!39;UBERON:0001890!7.39e-16!39;UBERON:0006240!7.39e-16!39;UBERON:0003056!3.33e-14!49;UBERON:0000956!4.69e-12!21;UBERON:0001869!4.69e-12!21;UBERON:0000203!4.69e-12!21;UBERON:0004111!1.29e-11!122;UBERON:0000025!2.14e-11!114;UBERON:0002619!1.12e-09!17;UBERON:0007811!3.24e-09!86;UBERON:0002021!3.13e-08!10;UBERON:0000411!3.13e-08!10;UBERON:0001950!3.13e-08!10;UBERON:0003076!2.06e-07!12;UBERON:0003057!2.06e-07!12;UBERON:0000153!2.10e-07!94;UBERON:0000475!4.94e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-40,54;UBERON:0001049,7.46e-37,52;UBERON:0005068,7.46e-37,52;UBERON:0006241,7.46e-37,52;UBERON:0007135,7.46e-37,52;UBERON:0001017,1.11e-36,73;UBERON:0001016,2.03e-35,75;UBERON:0002020,3.39e-35,34;UBERON:0000955,9.39e-29,47;UBERON:0006238,9.39e-29,47;UBERON:0002346,3.64e-28,64;UBERON:0003075,3.64e-28,64;UBERON:0007284,3.64e-28,64;UBERON:0002616,1.45e-27,46;UBERON:0004121,3.75e-27,95;UBERON:0000924,3.75e-27,95;UBERON:0006601,3.75e-27,95;UBERON:0003528,1.18e-26,29;UBERON:0002791,1.18e-26,29;UBERON:0001893,1.18e-26,29;UBERON:0010371,1.57e-23,73;UBERON:0003080,2.08e-23,40;UBERON:0002780,4.55e-22,39;UBERON:0001890,4.55e-22,39;UBERON:0006240,4.55e-22,39;UBERON:0000956,2.75e-20,21;UBERON:0001869,2.75e-20,21;UBERON:0000203,2.75e-20,21;UBERON:0003056,8.04e-18,49;UBERON:0010314,9.67e-17,92;UBERON:0002619,3.70e-15,17;UBERON:0002021,3.51e-14,10;UBERON:0000411,3.51e-14,10;UBERON:0001950,3.51e-14,10;UBERON:0003076,4.36e-14,12;UBERON:0003057,4.36e-14,12;UBERON:0000025,1.26e-12,114;UBERON:0004111,4.92e-12,122;UBERON:0002240,3.38e-11,6;UBERON:0005174,3.38e-11,6;UBERON:0001137,3.38e-11,6;UBERON:0001948,4.51e-10,5;UBERON:0002315,4.51e-10,5;UBERON:0011216,3.95e-09,194;UBERON:0002420,1.88e-07,8;UBERON:0007245,1.88e-07,8;UBERON:0010009,1.88e-07,8;UBERON:0010011,1.88e-07,8;UBERON:0000454,1.88e-07,8;UBERON:0002950,2.60e-07,4;UBERON:0001891,2.60e-07,4;UBERON:0009616,2.60e-07,4;UBERON:0010286,2.60e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,3.80298842103708,0,0,0,0,0,0,0,1.34796496001021,1.4850653216486,2.10324961351382,2.57085885963423,4.19650227808066,1.22490799214954,1.0543001812006,2.75765635983006,2.20231761998777,4.59674417106676,2.30409799884365,0.395658863190582,1.82975287204819,0.52091337055676,1.3959149950069,2.25105044012672,2.59757021220577,4.12480019663135,4.41352210477219,1.86399445825301,0.302904773332736,0.0755715601067855,0.579728977403356,0,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,3.80615036115011,8.3778682725382,0.255457055208591,0,0,0,2.24685959107234,2.74500361691176,2.01046963380583,1.56441888173049,3.83573185995496,2.49345653471472,1.46017136760982,0,0.124406970610093,0,0.420883711772948,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405344047729279,0.146199987425332,0.439100230582101,0.268412837520744,1.05144974282064,0.720332286654991,0,0,0,0,0.257734922644187,0.201683524623343,0,0,0.949058123089023,0,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0.575392274901621,0.162135226775035,0.549122826376163,0,0.744281895337007,1.24815069245824,0.757736633841335,0.538192240565737,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0.159454768657487,0.655453258862952,0,0,0,0,0,0.275936746304732,1.12385412991454,2.10981035865966,0,0.504941854408746,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0.164970122972535,2.65490276679926,0,0,0.754420319023592,0.295301892880773,0.307435147943927,1.55056975900933,0.727067458955011,1.42598951353889,2.52829406348653,0,2.06271086496374,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.492422699235184,0,1.29797711407357,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.826534557253359,0.785267825952089,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,2.76195141904306,3.43737308063638,2.40594455281163,3.42541259885321,1.5107877947794,3.37511250115903,3.60256962579376,2.26571204492102,0.51776031175182,0,0,0,0.729320151204882,0.419226325255965,0.735374033800057,0,0.206035057238894,0.320919209591815,0,0,0.565879024158229,0.468207537349412,0.320125762024346,0.459483751644906,0,0.695305955669133,0,0.412085900803307,0.588795680537589,0,1.06485483695602,0.238436189947321,0.290692833264657,0.470546902076653,0.507687647350059,0,0.263069711437843,0.135804113845862,0,0.593175090620871,0.394017929502254,0,0.929621047115796,0,0.999242311751784,0,0,0.382576664137687,0.661774257358546,0 | |||
|short_description=p7@Sybu | |||
}} |
Revision as of 10:31, 13 September 2013
Short description: | p7@Sybu |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sybu_5end |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | 294bp_to_uc007vqd.1_5end |
EntrezGene: | Sybu |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.09e-29 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-29 | 23 |
neuron | 6.36e-19 | 33 |
neuronal stem cell | 6.36e-19 | 33 |
neuroblast | 6.36e-19 | 33 |
electrically signaling cell | 6.36e-19 | 33 |
electrically responsive cell | 3.89e-15 | 39 |
electrically active cell | 3.89e-15 | 39 |
neural cell | 3.29e-13 | 43 |
ectodermal cell | 8.77e-13 | 44 |
neurectodermal cell | 8.77e-13 | 44 |
neuron of cerebral cortex | 3.28e-09 | 6 |
embryonic cell | 8.32e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.