FFCP PHASE1:Mm9::chr15:24185318..24185321,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:24185318..24185321,+|id=chr15:24185318..24185321,+|ontology_enrichment_celltype=CL:0000553!4.41e-12!6;CL:0000556!4.41e-12!6;CL:0000050!9.13e-08!9;CL:0002027!9.41e-08!3;CL:0002006!9.41e-08!3;CL:0002024!9.41e-08!3|ontology_enrichment_celltype_v019_2=CL:0002027,7.35e-53,3;CL:0002006,7.35e-53,3;CL:0002024,7.35e-53,3;CL:0000553,5.66e-27,6;CL:0000556,5.66e-27,6;CL:0000050,2.63e-18,9;CL:0000839,6.03e-13,13;CL:0000763,1.13e-10,16;CL:0000049,4.12e-09,19;CL:0002031,4.23e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!5.66e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.43e-13,22;UBERON:0004765,2.43e-13,22;UBERON:0001434,2.43e-13,22;UBERON:0002371,1.13e-10,16;UBERON:0002204,2.22e-09,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,5.4668322195253,8.39474253753776,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.333690211432188,0.393117990226406,4.27238013531222,0.608580364165509,0.241177159752417,0,0.863088412352432,0.324270453550071,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0,0,0.983179888294428,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0.394017929502254,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr15:24185318..24185321,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:24185318..24185321,+ | |||
|id=chr15:24185318..24185321,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.41e-12!6;CL:0000556!4.41e-12!6;CL:0000050!9.13e-08!9;CL:0002027!9.41e-08!3;CL:0002006!9.41e-08!3;CL:0002024!9.41e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,7.35e-53,3;CL:0002006,7.35e-53,3;CL:0002024,7.35e-53,3;CL:0000553,5.66e-27,6;CL:0000556,5.66e-27,6;CL:0000050,2.63e-18,9;CL:0000839,6.03e-13,13;CL:0000763,1.13e-10,16;CL:0000049,4.12e-09,19;CL:0002031,4.23e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!5.66e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.43e-13,22;UBERON:0004765,2.43e-13,22;UBERON:0001434,2.43e-13,22;UBERON:0002371,1.13e-10,16;UBERON:0002204,2.22e-09,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,5.4668322195253,8.39474253753776,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0,0,0,0,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0.402619256281115,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.333690211432188,0.393117990226406,4.27238013531222,0.608580364165509,0.241177159752417,0,0.863088412352432,0.324270453550071,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0,0,0.983179888294428,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0.394017929502254,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:24185318..24185321,+ | |||
}} |
Revision as of 10:15, 13 September 2013
Short description: | p@chr15:24185318..24185321, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:24185318..24185321, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 7.35e-53 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.35e-53 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.35e-53 | 3 |
megakaryocyte progenitor cell | 5.66e-27 | 6 |
megakaryocyte | 5.66e-27 | 6 |
megakaryocyte-erythroid progenitor cell | 2.63e-18 | 9 |
myeloid lineage restricted progenitor cell | 6.03e-13 | 13 |
myeloid cell | 1.13e-10 | 16 |
common myeloid progenitor | 4.12e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 4.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.43e-13 | 22 |
skeletal element | 2.43e-13 | 22 |
skeletal system | 2.43e-13 | 22 |
bone marrow | 1.13e-10 | 16 |
musculoskeletal system | 2.22e-09 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.