FFCP PHASE1:Hg19::chr4:17783004..17783015,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27146|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29235|TSSclassifier=S|UniProt=Q9ULE4|association_with_transcript=119bp_to_ENST00000265018,NM_015688,uc003gpm.3_5end|coexpression_cluster_id=C150|description=CAGE_peak_3_at_FAM184B_5end|id=chr4:17783004..17783015,-|ontology_enrichment_celltype=CL:0000242!4.48e-08!2;CL:0000047!4.85e-07!8|ontology_enrichment_celltype_v019=CL:0000047;3.59e-37;2!CL:0000123;4.31e-37;2!CL:0000242;4.31e-37;2!CL:0000312;1.68e-15;5!CL:0000240;4.39e-13;6!CL:0000311;4.39e-13;6!CL:0000079;4.39e-13;6!CL:0000237;4.39e-13;6!CL:0002319;4.03e-11;25!CL:0000362;4.90e-09;9|ontology_enrichment_celltype_v019_2=CL:0000242,3.28e-37,2;CL:0000312,1.51e-15,5;CL:0000240,4.01e-13,6;CL:0000311,4.01e-13,6;CL:0000079,4.01e-13,6;CL:0000237,4.01e-13,6;CL:0000036,4.01e-13,6;CL:0000357,4.01e-13,6;CL:0000114,4.01e-13,6;CL:0002319,3.93e-11,25;CL:0000047,4.62e-10,8;CL:0000362,4.61e-09,9|ontology_enrichment_development_v019=CL:0000357;4.39e-13;6!CL:0000114;4.39e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!3.25e-32!86;UBERON:0000073!2.84e-30!94;UBERON:0001016!2.84e-30!94;UBERON:0001893!4.29e-30!34;UBERON:0001017!7.48e-30!82;UBERON:0001049!2.92e-29!57;UBERON:0005068!2.92e-29!57;UBERON:0006241!2.92e-29!57;UBERON:0007135!2.92e-29!57;UBERON:0002616!4.73e-28!59;UBERON:0002791!5.07e-28!33;UBERON:0002020!2.24e-27!34;UBERON:0003528!2.24e-27!34;UBERON:0002780!5.50e-27!41;UBERON:0001890!5.50e-27!41;UBERON:0006240!5.50e-27!41;UBERON:0000955!8.83e-27!69;UBERON:0006238!8.83e-27!69;UBERON:0003080!3.15e-26!42;UBERON:0001869!9.86e-26!32;UBERON:0002346!1.46e-22!90;UBERON:0003056!3.13e-22!61;UBERON:0003075!3.60e-22!86;UBERON:0007284!3.60e-22!86;UBERON:0001950!6.55e-22!20;UBERON:0000924!9.87e-21!173;UBERON:0006601!9.87e-21!173;UBERON:0004121!3.49e-20!169;UBERON:0002619!9.81e-20!22;UBERON:0000153!9.95e-20!129;UBERON:0007811!9.95e-20!129;UBERON:0000033!1.40e-19!123;UBERON:0007023!7.94e-19!115;UBERON:0000956!4.21e-17!25;UBERON:0000203!4.21e-17!25;UBERON:0002308!2.27e-12!9;UBERON:0000125!2.27e-12!9;UBERON:0002420!3.68e-12!9;UBERON:0007245!3.68e-12!9;UBERON:0010009!3.68e-12!9;UBERON:0010011!3.68e-12!9;UBERON:0000454!3.68e-12!9;UBERON:0009663!3.08e-11!7;UBERON:0002298!8.53e-10!8;UBERON:0001871!1.36e-09!7;UBERON:0000200!1.54e-08!6;UBERON:0000025!4.70e-08!194;UBERON:0000064!1.31e-07!219;UBERON:0000369!1.33e-07!4;UBERON:0002435!1.33e-07!4;UBERON:0000204!1.33e-07!4;UBERON:0010082!1.33e-07!4;UBERON:0001870!1.42e-07!2;UBERON:0000475!1.93e-07!365;UBERON:0004111!7.97e-07!241|ontology_enrichment_uberon_v019=UBERON:0001874;2.97e-19;1!UBERON:0002702;2.60e-10;2!UBERON:0002791;1.44e-09;32!UBERON:0001869;8.84e-09;32!UBERON:0003528;2.23e-08;34!UBERON:0002020;2.23e-08;34!UBERON:0001950;2.27e-08;20!UBERON:0002619;1.08e-07;22!UBERON:0001870;2.71e-07;3!UBERON:0002114;2.71e-07;2!UBERON:0005383;2.71e-07;3!UBERON:0005382;2.71e-07;3!UBERON:0001893;3.71e-07;34!UBERON:0000956;7.26e-07;25!UBERON:0000203;7.26e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001874,3.91e-19,1;UBERON:0002702,1.89e-10,2;UBERON:0002791,4.52e-09,32;UBERON:0001869,4.52e-09,32;UBERON:0003528,1.44e-08,34;UBERON:0002020,1.44e-08,34;UBERON:0001893,1.44e-08,34;UBERON:0001950,2.27e-08,20;UBERON:0002619,1.08e-07,22;UBERON:0001017,1.10e-07,81;UBERON:0001870,2.19e-07,3;UBERON:0002114,2.32e-07,2;UBERON:0005383,2.97e-07,3;UBERON:0005382,2.97e-07,3;UBERON:0002780,3.48e-07,41;UBERON:0001890,3.48e-07,41;UBERON:0003080,3.48e-07,41;UBERON:0006240,3.48e-07,41;UBERON:0001016,6.54e-07,89;UBERON:0000956,7.26e-07,25;UBERON:0000203,7.26e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86055485400651,1.30139853857622,0.773288812777695,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0.185536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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29235 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULE4 | |||
|association_with_transcript=119bp_to_ENST00000265018,NM_015688,uc003gpm.3_5end | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_3_at_FAM184B_5end | |||
|id=chr4:17783004..17783015,- | |||
|ontology_enrichment_celltype=CL:0000242!4.48e-08!2;CL:0000047!4.85e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.59e-37;2!CL:0000123;4.31e-37;2!CL:0000242;4.31e-37;2!CL:0000312;1.68e-15;5!CL:0000240;4.39e-13;6!CL:0000311;4.39e-13;6!CL:0000079;4.39e-13;6!CL:0000237;4.39e-13;6!CL:0002319;4.03e-11;25!CL:0000362;4.90e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.28e-37,2;CL:0000312,1.51e-15,5;CL:0000240,4.01e-13,6;CL:0000311,4.01e-13,6;CL:0000079,4.01e-13,6;CL:0000237,4.01e-13,6;CL:0000036,4.01e-13,6;CL:0000357,4.01e-13,6;CL:0000114,4.01e-13,6;CL:0002319,3.93e-11,25;CL:0000047,4.62e-10,8;CL:0000362,4.61e-09,9 | |||
|ontology_enrichment_development_v019=CL:0000357;4.39e-13;6!CL:0000114;4.39e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.25e-32!86;UBERON:0000073!2.84e-30!94;UBERON:0001016!2.84e-30!94;UBERON:0001893!4.29e-30!34;UBERON:0001017!7.48e-30!82;UBERON:0001049!2.92e-29!57;UBERON:0005068!2.92e-29!57;UBERON:0006241!2.92e-29!57;UBERON:0007135!2.92e-29!57;UBERON:0002616!4.73e-28!59;UBERON:0002791!5.07e-28!33;UBERON:0002020!2.24e-27!34;UBERON:0003528!2.24e-27!34;UBERON:0002780!5.50e-27!41;UBERON:0001890!5.50e-27!41;UBERON:0006240!5.50e-27!41;UBERON:0000955!8.83e-27!69;UBERON:0006238!8.83e-27!69;UBERON:0003080!3.15e-26!42;UBERON:0001869!9.86e-26!32;UBERON:0002346!1.46e-22!90;UBERON:0003056!3.13e-22!61;UBERON:0003075!3.60e-22!86;UBERON:0007284!3.60e-22!86;UBERON:0001950!6.55e-22!20;UBERON:0000924!9.87e-21!173;UBERON:0006601!9.87e-21!173;UBERON:0004121!3.49e-20!169;UBERON:0002619!9.81e-20!22;UBERON:0000153!9.95e-20!129;UBERON:0007811!9.95e-20!129;UBERON:0000033!1.40e-19!123;UBERON:0007023!7.94e-19!115;UBERON:0000956!4.21e-17!25;UBERON:0000203!4.21e-17!25;UBERON:0002308!2.27e-12!9;UBERON:0000125!2.27e-12!9;UBERON:0002420!3.68e-12!9;UBERON:0007245!3.68e-12!9;UBERON:0010009!3.68e-12!9;UBERON:0010011!3.68e-12!9;UBERON:0000454!3.68e-12!9;UBERON:0009663!3.08e-11!7;UBERON:0002298!8.53e-10!8;UBERON:0001871!1.36e-09!7;UBERON:0000200!1.54e-08!6;UBERON:0000025!4.70e-08!194;UBERON:0000064!1.31e-07!219;UBERON:0000369!1.33e-07!4;UBERON:0002435!1.33e-07!4;UBERON:0000204!1.33e-07!4;UBERON:0010082!1.33e-07!4;UBERON:0001870!1.42e-07!2;UBERON:0000475!1.93e-07!365;UBERON:0004111!7.97e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.97e-19;1!UBERON:0002702;2.60e-10;2!UBERON:0002791;1.44e-09;32!UBERON:0001869;8.84e-09;32!UBERON:0003528;2.23e-08;34!UBERON:0002020;2.23e-08;34!UBERON:0001950;2.27e-08;20!UBERON:0002619;1.08e-07;22!UBERON:0001870;2.71e-07;3!UBERON:0002114;2.71e-07;2!UBERON:0005383;2.71e-07;3!UBERON:0005382;2.71e-07;3!UBERON:0001893;3.71e-07;34!UBERON:0000956;7.26e-07;25!UBERON:0000203;7.26e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,3.91e-19,1;UBERON:0002702,1.89e-10,2;UBERON:0002791,4.52e-09,32;UBERON:0001869,4.52e-09,32;UBERON:0003528,1.44e-08,34;UBERON:0002020,1.44e-08,34;UBERON:0001893,1.44e-08,34;UBERON:0001950,2.27e-08,20;UBERON:0002619,1.08e-07,22;UBERON:0001017,1.10e-07,81;UBERON:0001870,2.19e-07,3;UBERON:0002114,2.32e-07,2;UBERON:0005383,2.97e-07,3;UBERON:0005382,2.97e-07,3;UBERON:0002780,3.48e-07,41;UBERON:0001890,3.48e-07,41;UBERON:0003080,3.48e-07,41;UBERON:0006240,3.48e-07,41;UBERON:0001016,6.54e-07,89;UBERON:0000956,7.26e-07,25;UBERON:0000203,7.26e-07,25 | |||
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|short_description=p3@FAM184B | |||
}} |
Revision as of 10:08, 13 September 2013
Short description: | p3@FAM184B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM184B_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | 119bp_to_ENST00000265018, NM_015688, uc003gpm.3_5end |
EntrezGene: | FAM184B |
HGNC: | 29235 |
UniProt: | Q9ULE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.28e-37 | 2 |
keratinocyte | 1.51e-15 | 5 |
stratified squamous epithelial cell | 4.01e-13 | 6 |
keratin accumulating cell | 4.01e-13 | 6 |
stratified epithelial cell | 4.01e-13 | 6 |
keratinizing barrier epithelial cell | 4.01e-13 | 6 |
epithelial fate stem cell | 4.01e-13 | 6 |
stratified epithelial stem cell | 4.01e-13 | 6 |
surface ectodermal cell | 4.01e-13 | 6 |
neural cell | 3.93e-11 | 25 |
neuronal stem cell | 4.62e-10 | 8 |
epidermal cell | 4.61e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
putamen | 3.91e-19 | 1 |
middle frontal gyrus | 1.89e-10 | 2 |
regional part of telencephalon | 4.52e-09 | 32 |
cerebral hemisphere | 4.52e-09 | 32 |
brain grey matter | 1.44e-08 | 34 |
gray matter | 1.44e-08 | 34 |
telencephalon | 1.44e-08 | 34 |
neocortex | 2.27e-08 | 20 |
regional part of cerebral cortex | 1.08e-07 | 22 |
central nervous system | 1.10e-07 | 81 |
frontal cortex | 2.19e-07 | 3 |
duodenum | 2.32e-07 | 2 |
caudate-putamen | 2.97e-07 | 3 |
dorsal striatum | 2.97e-07 | 3 |
regional part of forebrain | 3.48e-07 | 41 |
forebrain | 3.48e-07 | 41 |
anterior neural tube | 3.48e-07 | 41 |
future forebrain | 3.48e-07 | 41 |
nervous system | 6.54e-07 | 89 |
cerebral cortex | 7.26e-07 | 25 |
pallium | 7.26e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.