FFCP PHASE1:Mm9::chr14:56194692..56194703,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=307|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:56194692..56194703,+|id=chr14:56194692..56194703,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,7.00e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.09e-11!43;UBERON:0003914!3.84e-11!47;UBERON:0002113!4.25e-11!14;UBERON:0003918!4.25e-11!14;UBERON:0005095!4.25e-11!14;UBERON:0007687!4.25e-11!14;UBERON:0005172!1.71e-10!49;UBERON:0005173!1.71e-10!49;UBERON:0002417!1.71e-10!49;UBERON:0000916!1.71e-10!49;UBERON:0006554!2.21e-09!16;UBERON:0001008!1.12e-08!17;UBERON:0009569!4.45e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.61e-16,22;UBERON:0007499,9.61e-16,22;UBERON:0006925,9.61e-16,22;UBERON:0009497,9.61e-16,22;UBERON:0000015,9.61e-16,22;UBERON:0002423,9.61e-16,22;UBERON:0006235,9.61e-16,22;UBERON:0008835,9.61e-16,22;UBERON:0003894,9.61e-16,22;UBERON:0004161,9.61e-16,22;UBERON:0008836,9.61e-16,22;UBERON:0009854,5.49e-15,23;UBERON:0009856,5.49e-15,23;UBERON:0005172,6.68e-15,49;UBERON:0005173,6.68e-15,49;UBERON:0002417,6.68e-15,49;UBERON:0000916,6.68e-15,49;UBERON:0002365,1.18e-13,25;UBERON:0002330,1.18e-13,25;UBERON:0003104,4.42e-13,61;UBERON:0009142,4.42e-13,61;UBERON:0003914,3.49e-11,47;UBERON:0009569,2.47e-10,66;UBERON:0005177,3.62e-08,79;UBERON:0005256,7.71e-07,45;UBERON:0002100,7.98e-07,90;UBERON:0002113,9.26e-07,14;UBERON:0003918,9.26e-07,14;UBERON:0011143,9.26e-07,14;UBERON:0005095,9.26e-07,14;UBERON:0007687,9.26e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60423876981386,0,12.4131734076698,7.79731700937203,4.48026887097336,3.37066608316204,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,1.10420759230197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0.469052119962192,0,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.233530684734339,0,0.656669856316381,1.37816976227955,1.60819986167866,0.878200461164203,1.20785776884335,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,3.28829993046138,7.38050739898011,8.00693511991011,7.52722699922983,1.48226313543574,0,0,0,0,0,0,0,0,0,1.43768206527355,1.48856379067401,2.18426371180192,1.01031551178845,2.69096120282868,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.57386499620653,0.441182838239031,1.15933917810211|short_description=p@chr14:56194692..56194703,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=307 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:56194692..56194703,+ | |||
|id=chr14:56194692..56194703,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.00e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.09e-11!43;UBERON:0003914!3.84e-11!47;UBERON:0002113!4.25e-11!14;UBERON:0003918!4.25e-11!14;UBERON:0005095!4.25e-11!14;UBERON:0007687!4.25e-11!14;UBERON:0005172!1.71e-10!49;UBERON:0005173!1.71e-10!49;UBERON:0002417!1.71e-10!49;UBERON:0000916!1.71e-10!49;UBERON:0006554!2.21e-09!16;UBERON:0001008!1.12e-08!17;UBERON:0009569!4.45e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.61e-16,22;UBERON:0007499,9.61e-16,22;UBERON:0006925,9.61e-16,22;UBERON:0009497,9.61e-16,22;UBERON:0000015,9.61e-16,22;UBERON:0002423,9.61e-16,22;UBERON:0006235,9.61e-16,22;UBERON:0008835,9.61e-16,22;UBERON:0003894,9.61e-16,22;UBERON:0004161,9.61e-16,22;UBERON:0008836,9.61e-16,22;UBERON:0009854,5.49e-15,23;UBERON:0009856,5.49e-15,23;UBERON:0005172,6.68e-15,49;UBERON:0005173,6.68e-15,49;UBERON:0002417,6.68e-15,49;UBERON:0000916,6.68e-15,49;UBERON:0002365,1.18e-13,25;UBERON:0002330,1.18e-13,25;UBERON:0003104,4.42e-13,61;UBERON:0009142,4.42e-13,61;UBERON:0003914,3.49e-11,47;UBERON:0009569,2.47e-10,66;UBERON:0005177,3.62e-08,79;UBERON:0005256,7.71e-07,45;UBERON:0002100,7.98e-07,90;UBERON:0002113,9.26e-07,14;UBERON:0003918,9.26e-07,14;UBERON:0011143,9.26e-07,14;UBERON:0005095,9.26e-07,14;UBERON:0007687,9.26e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60423876981386,0,12.4131734076698,7.79731700937203,4.48026887097336,3.37066608316204,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0.161766849947409,1.10420759230197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0.469052119962192,0,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.233530684734339,0,0.656669856316381,1.37816976227955,1.60819986167866,0.878200461164203,1.20785776884335,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,3.28829993046138,7.38050739898011,8.00693511991011,7.52722699922983,1.48226313543574,0,0,0,0,0,0,0,0,0,1.43768206527355,1.48856379067401,2.18426371180192,1.01031551178845,2.69096120282868,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0.57386499620653,0.441182838239031,1.15933917810211 | |||
|short_description=p@chr14:56194692..56194703,+ | |||
}} |
Revision as of 02:32, 13 September 2013
Short description: | p@chr14:56194692..56194703, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:56194692..56194703, + |
Coexpression cluster: | MCL_coexpression_mm9:307 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.00e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 9.61e-16 | 22 |
epithelial sac | 9.61e-16 | 22 |
digestive gland | 9.61e-16 | 22 |
epithelium of foregut-midgut junction | 9.61e-16 | 22 |
anatomical boundary | 9.61e-16 | 22 |
hepatobiliary system | 9.61e-16 | 22 |
foregut-midgut junction | 9.61e-16 | 22 |
hepatic diverticulum | 9.61e-16 | 22 |
liver primordium | 9.61e-16 | 22 |
septum transversum | 9.61e-16 | 22 |
liver bud | 9.61e-16 | 22 |
digestive tract diverticulum | 5.49e-15 | 23 |
sac | 5.49e-15 | 23 |
abdomen element | 6.68e-15 | 49 |
abdominal segment element | 6.68e-15 | 49 |
abdominal segment of trunk | 6.68e-15 | 49 |
abdomen | 6.68e-15 | 49 |
exocrine gland | 1.18e-13 | 25 |
exocrine system | 1.18e-13 | 25 |
mesenchyme | 4.42e-13 | 61 |
entire embryonic mesenchyme | 4.42e-13 | 61 |
epithelial tube | 3.49e-11 | 47 |
subdivision of trunk | 2.47e-10 | 66 |
trunk region element | 3.62e-08 | 79 |
trunk mesenchyme | 7.71e-07 | 45 |
trunk | 7.98e-07 | 90 |
kidney | 9.26e-07 | 14 |
kidney mesenchyme | 9.26e-07 | 14 |
upper urinary tract | 9.26e-07 | 14 |
kidney rudiment | 9.26e-07 | 14 |
kidney field | 9.26e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.