FFCP PHASE1:Mm9::chr14:54793202..54793209,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2109|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:54793202..54793209,+|id=chr14:54793202..54793209,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.00e-16!43;UBERON:0005409!2.66e-11!59;UBERON:0001962!5.74e-10!2;UBERON:0001961!5.74e-10!2;UBERON:0001744!5.74e-10!2;UBERON:0000344!9.90e-10!15;UBERON:0004119!2.72e-08!130;UBERON:0000925!2.72e-08!130;UBERON:0006595!2.72e-08!130;UBERON:0004923!8.61e-08!24;UBERON:0001007!2.15e-07!128;UBERON:0001555!2.15e-07!128;UBERON:0007026!2.15e-07!128;UBERON:0002465!6.65e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.78e-26,2;UBERON:0001961,1.78e-26,2;UBERON:0001744,1.78e-26,2;UBERON:0002465,5.00e-18,3;UBERON:0003199,4.85e-14,1;UBERON:0000160,2.68e-10,31;UBERON:0000344,2.88e-08,15;UBERON:0005409,7.11e-07,47|phase1_expression=0,1.74487703819681,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,4.31979541542198,2.98232065387321,0,0.86152399231815,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.32225283331772,0,0,0,0,0,0.190225626112559,0,0.658795818896044,1.75934646160189,1.98956472041151,2.33956904542944,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:54793202..54793209,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2109 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:54793202..54793209,+ | |||
|id=chr14:54793202..54793209,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.00e-16!43;UBERON:0005409!2.66e-11!59;UBERON:0001962!5.74e-10!2;UBERON:0001961!5.74e-10!2;UBERON:0001744!5.74e-10!2;UBERON:0000344!9.90e-10!15;UBERON:0004119!2.72e-08!130;UBERON:0000925!2.72e-08!130;UBERON:0006595!2.72e-08!130;UBERON:0004923!8.61e-08!24;UBERON:0001007!2.15e-07!128;UBERON:0001555!2.15e-07!128;UBERON:0007026!2.15e-07!128;UBERON:0002465!6.65e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.78e-26,2;UBERON:0001961,1.78e-26,2;UBERON:0001744,1.78e-26,2;UBERON:0002465,5.00e-18,3;UBERON:0003199,4.85e-14,1;UBERON:0000160,2.68e-10,31;UBERON:0000344,2.88e-08,15;UBERON:0005409,7.11e-07,47 | |||
|phase1_expression=0,1.74487703819681,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,4.31979541542198,2.98232065387321,0,0.86152399231815,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,1.32225283331772,0,0,0,0,0,0.190225626112559,0,0.658795818896044,1.75934646160189,1.98956472041151,2.33956904542944,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:54793202..54793209,+ | |||
}} |
Revision as of 02:21, 13 September 2013
Short description: | p@chr14:54793202..54793209, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54793202..54793209, + |
Coexpression cluster: | MCL_coexpression_mm9:2109 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.78e-26 | 2 |
mucosa-associated lymphoid tissue | 1.78e-26 | 2 |
lymphoid tissue | 1.78e-26 | 2 |
lymphoid system | 5.00e-18 | 3 |
egg chamber | 4.85e-14 | 1 |
intestine | 2.68e-10 | 31 |
mucosa | 2.88e-08 | 15 |
gastrointestinal system | 7.11e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.