FFCP PHASE1:Hg19::chr4:111536534..111536575,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000503456_5end|coexpression_cluster_id=C4360|description=CAGE_peak_1_at_ENST00000503456_5end|id=chr4:111536534..111536575,-|ontology_enrichment_celltype=CL:0002363!9.87e-11!2;CL:0000008!9.87e-11!2;CL:0002367!1.25e-10!2;CL:0002588!4.86e-10!2;CL:0002569!1.01e-07!6;CL:0002621!4.13e-07!3;CL:0002166!7.14e-07!3|ontology_enrichment_celltype_v019=CL:0002363;4.04e-31;2!CL:0002569;3.39e-11;6!CL:0002367;4.18e-09;2|ontology_enrichment_celltype_v019_2=CL:0002363,6.41e-31,2;CL:0000008,6.41e-31,2;CL:0002569,3.39e-11,6;CL:0002367,4.34e-09,2|ontology_enrichment_development_v019=CL:0000008;4.04e-31;2!UBERON:0010227;4.72e-17;1!UBERON:0000358;7.00e-17;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003566!9.87e-11!2;UBERON:0001777!9.87e-11!2;UBERON:0005969!1.25e-10!2;UBERON:0003956!1.25e-10!2;UBERON:0000020!2.33e-09!23;UBERON:0003891!4.20e-09!5;UBERON:0001032!6.28e-09!24;UBERON:0004456!6.28e-09!24;UBERON:0000970!3.73e-08!20;UBERON:0002331!6.67e-08!10;UBERON:0000358!6.67e-08!10;UBERON:0000307!6.67e-08!10;UBERON:0000091!6.67e-08!10;UBERON:0000087!6.67e-08!10;UBERON:0007806!6.67e-08!10;UBERON:0008780!6.67e-08!10;UBERON:0005728!6.67e-08!10;UBERON:0002104!9.83e-08!21;UBERON:0003422!1.01e-07!6;UBERON:0001949!4.13e-07!3|ontology_enrichment_uberon_v019=UBERON:0003566;4.04e-31;2!UBERON:0001777;4.04e-31;2!UBERON:0002079;4.72e-17;1!UBERON:0002135;1.78e-16;1!UBERON:0003891;4.18e-16;4!UBERON:0000964;4.18e-16;4!UBERON:0010409;4.18e-16;4!UBERON:0002331;1.73e-14;10!UBERON:0010313;2.99e-14;10!UBERON:0000019;3.16e-13;19!UBERON:0000047;3.16e-13;19!UBERON:0004088;3.16e-13;19!UBERON:0010230;3.16e-13;19!UBERON:0000970;1.40e-12;20!UBERON:0002104;5.37e-12;21!UBERON:0001456;5.37e-12;21!UBERON:0003422;3.39e-11;6!UBERON:0000020;5.59e-11;23!UBERON:0001032;1.56e-10;24!UBERON:0004456;1.56e-10;24!UBERON:0001801;1.93e-10;14!UBERON:0003104;9.94e-10;7!UBERON:0009142;9.94e-10;7!UBERON:0002081;3.43e-09;2!UBERON:0005969;4.18e-09;2!UBERON:0003956;4.18e-09;2!UBERON:0000007;6.67e-09;2!UBERON:0002133;6.67e-09;2|ontology_enrichment_uberon_v019_2=UBERON:0003566,6.41e-31,2;UBERON:0001777,6.41e-31,2;UBERON:0002079,4.72e-17,1;UBERON:0002135,1.21e-16,1;UBERON:0003891,5.26e-16,4;UBERON:0000964,5.26e-16,4;UBERON:0010409,5.26e-16,4;UBERON:0004348,5.26e-16,4;UBERON:0005427,5.26e-16,4;UBERON:0002331,1.69e-14,10;UBERON:0000358,1.69e-14,10;UBERON:0000307,1.69e-14,10;UBERON:0000091,1.69e-14,10;UBERON:0000087,1.69e-14,10;UBERON:0007010,1.69e-14,10;UBERON:0007806,1.69e-14,10;UBERON:0008780,1.69e-14,10;UBERON:0005728,1.69e-14,10;UBERON:0010313,3.06e-14,10;UBERON:0002342,3.06e-14,10;UBERON:0005062,3.06e-14,10;UBERON:0000019,1.49e-12,20;UBERON:0000047,1.49e-12,20;UBERON:0010312,1.49e-12,20;UBERON:0004088,1.49e-12,20;UBERON:0010230,1.49e-12,20;UBERON:0003072,1.49e-12,20;UBERON:0004128,1.49e-12,20;UBERON:0003071,1.49e-12,20;UBERON:0000970,5.69e-12,21;UBERON:0002104,5.69e-12,21;UBERON:0001456,1.93e-11,22;UBERON:0003422,3.39e-11,6;UBERON:0000020,1.64e-10,24;UBERON:0001032,1.64e-10,24;UBERON:0004456,1.64e-10,24;UBERON:0001801,2.17e-10,14;UBERON:0002081,3.43e-09,2;UBERON:0010227,3.43e-09,2;UBERON:0005969,4.34e-09,2;UBERON:0003956,4.34e-09,2;UBERON:0002133,5.49e-09,2;UBERON:0000007,7.49e-09,2;UBERON:0005085,3.39e-08,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77810662500693,0,0,0,0.57978255948989,0,0.286804595389004,0,0.265059536642971,0.232387885739037,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,1.3032332212413,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,2.17048642156577,1.64648067356154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0,0,2.27683904259429,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000503456_5end | |||
|coexpression_cluster_id=C4360 | |||
|description=CAGE_peak_1_at_ENST00000503456_5end | |||
|id=chr4:111536534..111536575,- | |||
|ontology_enrichment_celltype=CL:0002363!9.87e-11!2;CL:0000008!9.87e-11!2;CL:0002367!1.25e-10!2;CL:0002588!4.86e-10!2;CL:0002569!1.01e-07!6;CL:0002621!4.13e-07!3;CL:0002166!7.14e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002363;4.04e-31;2!CL:0002569;3.39e-11;6!CL:0002367;4.18e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,6.41e-31,2;CL:0000008,6.41e-31,2;CL:0002569,3.39e-11,6;CL:0002367,4.34e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;4.04e-31;2!UBERON:0010227;4.72e-17;1!UBERON:0000358;7.00e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003566!9.87e-11!2;UBERON:0001777!9.87e-11!2;UBERON:0005969!1.25e-10!2;UBERON:0003956!1.25e-10!2;UBERON:0000020!2.33e-09!23;UBERON:0003891!4.20e-09!5;UBERON:0001032!6.28e-09!24;UBERON:0004456!6.28e-09!24;UBERON:0000970!3.73e-08!20;UBERON:0002331!6.67e-08!10;UBERON:0000358!6.67e-08!10;UBERON:0000307!6.67e-08!10;UBERON:0000091!6.67e-08!10;UBERON:0000087!6.67e-08!10;UBERON:0007806!6.67e-08!10;UBERON:0008780!6.67e-08!10;UBERON:0005728!6.67e-08!10;UBERON:0002104!9.83e-08!21;UBERON:0003422!1.01e-07!6;UBERON:0001949!4.13e-07!3 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003566,6.41e-31,2;UBERON:0001777,6.41e-31,2;UBERON:0002079,4.72e-17,1;UBERON:0002135,1.21e-16,1;UBERON:0003891,5.26e-16,4;UBERON:0000964,5.26e-16,4;UBERON:0010409,5.26e-16,4;UBERON:0004348,5.26e-16,4;UBERON:0005427,5.26e-16,4;UBERON:0002331,1.69e-14,10;UBERON:0000358,1.69e-14,10;UBERON:0000307,1.69e-14,10;UBERON:0000091,1.69e-14,10;UBERON:0000087,1.69e-14,10;UBERON:0007010,1.69e-14,10;UBERON:0007806,1.69e-14,10;UBERON:0008780,1.69e-14,10;UBERON:0005728,1.69e-14,10;UBERON:0010313,3.06e-14,10;UBERON:0002342,3.06e-14,10;UBERON:0005062,3.06e-14,10;UBERON:0000019,1.49e-12,20;UBERON:0000047,1.49e-12,20;UBERON:0010312,1.49e-12,20;UBERON:0004088,1.49e-12,20;UBERON:0010230,1.49e-12,20;UBERON:0003072,1.49e-12,20;UBERON:0004128,1.49e-12,20;UBERON:0003071,1.49e-12,20;UBERON:0000970,5.69e-12,21;UBERON:0002104,5.69e-12,21;UBERON:0001456,1.93e-11,22;UBERON:0003422,3.39e-11,6;UBERON:0000020,1.64e-10,24;UBERON:0001032,1.64e-10,24;UBERON:0004456,1.64e-10,24;UBERON:0001801,2.17e-10,14;UBERON:0002081,3.43e-09,2;UBERON:0010227,3.43e-09,2;UBERON:0005969,4.34e-09,2;UBERON:0003956,4.34e-09,2;UBERON:0002133,5.49e-09,2;UBERON:0000007,7.49e-09,2;UBERON:0005085,3.39e-08,31 | |||
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|short_description=p1@ENST00000503456 | |||
}} |
Revision as of 02:02, 13 September 2013
Short description: | p1@ENST00000503456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000503456_5end |
Coexpression cluster: | C4360_left_retina_heart_umbilical_Mesenchymal_eye_teratocarcinoma |
Association with transcript: | 0bp_to_ENST00000503456_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 6.41e-31 | 2 |
migratory cranial neural crest cell | 6.41e-31 | 2 |
mesenchymal stem cell of umbilical cord | 3.39e-11 | 6 |
trabecular meshwork cell | 4.34e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.