FFCP PHASE1:Mm9::chr13:95587649..95587666,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=224|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:95587649..95587666,+|id=chr13:95587649..95587666,+|ontology_enrichment_celltype=CL:0000117!3.33e-12!23;CL:0000337!3.33e-12!23;CL:0000120!3.43e-08!3;CL:0002613!4.01e-08!3;CL:0002612!1.01e-07!3;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000120,2.79e-38,3;CL:0002613,6.64e-38,3;CL:0000117,1.06e-26,23;CL:0000337,1.06e-26,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001948!3.71e-11!5;UBERON:0002315!3.71e-11!5;UBERON:0002240!3.20e-09!6;UBERON:0005174!3.20e-09!6;UBERON:0001137!3.20e-09!6;UBERON:0002257!1.01e-07!3;UBERON:0002020!5.32e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.12e-23,5;UBERON:0002435,4.12e-23,5;UBERON:0000204,4.12e-23,5;UBERON:0010082,4.12e-23,5;UBERON:0002420,9.43e-15,8;UBERON:0007245,9.43e-15,8;UBERON:0010009,9.43e-15,8;UBERON:0010011,9.43e-15,8;UBERON:0000454,9.43e-15,8;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,3.16527090552465,3.20206752608434,3.12548022334056,0.279182999001381,0,0,0.589257170947335,0.569486723196412,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0,0.818462086339379,0,0.578719832943424,0.249810577937946,0,0,0,0,0|short_description=p@chr13:95587649..95587666,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=224 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:95587649..95587666,+ | |||
|id=chr13:95587649..95587666,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.33e-12!23;CL:0000337!3.33e-12!23;CL:0000120!3.43e-08!3;CL:0002613!4.01e-08!3;CL:0002612!1.01e-07!3;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.79e-38,3;CL:0002613,6.64e-38,3;CL:0000117,1.06e-26,23;CL:0000337,1.06e-26,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001948!3.71e-11!5;UBERON:0002315!3.71e-11!5;UBERON:0002240!3.20e-09!6;UBERON:0005174!3.20e-09!6;UBERON:0001137!3.20e-09!6;UBERON:0002257!1.01e-07!3;UBERON:0002020!5.32e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.12e-23,5;UBERON:0002435,4.12e-23,5;UBERON:0000204,4.12e-23,5;UBERON:0010082,4.12e-23,5;UBERON:0002420,9.43e-15,8;UBERON:0007245,9.43e-15,8;UBERON:0010009,9.43e-15,8;UBERON:0010011,9.43e-15,8;UBERON:0000454,9.43e-15,8;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,3.16527090552465,3.20206752608434,3.12548022334056,0.279182999001381,0,0,0.589257170947335,0.569486723196412,1.67759501242771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0,0,0.853668028770671,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.271608227691724,0,0.237270036248348,0,0.818462086339379,0,0.578719832943424,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr13:95587649..95587666,+ | |||
}} |
Revision as of 01:19, 13 September 2013
Short description: | p@chr13:95587649..95587666, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:95587649..95587666, + |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.79e-38 | 3 |
striatum neuron | 6.64e-38 | 3 |
CNS neuron (sensu Vertebrata) | 1.06e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-26 | 23 |
neuron | 1.03e-18 | 33 |
neuronal stem cell | 1.03e-18 | 33 |
neuroblast | 1.03e-18 | 33 |
electrically signaling cell | 1.03e-18 | 33 |
electrically responsive cell | 7.07e-16 | 39 |
electrically active cell | 7.07e-16 | 39 |
neural cell | 2.01e-14 | 43 |
ectodermal cell | 4.23e-14 | 44 |
neurectodermal cell | 4.23e-14 | 44 |
embryonic cell | 6.38e-09 | 70 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 4.12e-23 | 5 |
striatum | 4.12e-23 | 5 |
ventral part of telencephalon | 4.12e-23 | 5 |
future corpus striatum | 4.12e-23 | 5 |
basal ganglion | 9.43e-15 | 8 |
nuclear complex of neuraxis | 9.43e-15 | 8 |
aggregate regional part of brain | 9.43e-15 | 8 |
collection of basal ganglia | 9.43e-15 | 8 |
cerebral subcortex | 9.43e-15 | 8 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.