FFCP PHASE1:Hg19::chr3:50712444..50712455,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100616138|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=41653|TSSclassifier=S|UniProt=|association_with_transcript=-55bp_to_NR_039950_5end|description=CAGE_peak_2_at_MIR4787_5end|id=chr3:50712444..50712455,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;2.05e-15;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4|ontology_enrichment_uberon=UBERON:0001049!9.73e-38!57;UBERON:0005068!9.73e-38!57;UBERON:0006241!9.73e-38!57;UBERON:0007135!9.73e-38!57;UBERON:0001893!1.33e-34!34;UBERON:0002020!1.47e-34!34;UBERON:0003528!1.47e-34!34;UBERON:0002616!9.26e-34!59;UBERON:0000955!1.62e-33!69;UBERON:0006238!1.62e-33!69;UBERON:0002780!4.50e-33!41;UBERON:0001890!4.50e-33!41;UBERON:0006240!4.50e-33!41;UBERON:0002791!1.86e-32!33;UBERON:0001017!2.20e-32!82;UBERON:0003080!3.94e-32!42;UBERON:0001869!4.22e-31!32;UBERON:0005743!1.98e-30!86;UBERON:0000073!5.44e-30!94;UBERON:0001016!5.44e-30!94;UBERON:0003075!5.09e-27!86;UBERON:0007284!5.09e-27!86;UBERON:0002619!1.02e-26!22;UBERON:0001950!8.12e-26!20;UBERON:0002346!2.14e-25!90;UBERON:0007023!2.61e-25!115;UBERON:0000956!4.18e-23!25;UBERON:0000203!4.18e-23!25;UBERON:0003056!7.89e-22!61;UBERON:0000033!4.24e-16!123;UBERON:0000153!6.23e-15!129;UBERON:0007811!6.23e-15!129;UBERON:0002308!3.97e-13!9;UBERON:0000125!3.97e-13!9;UBERON:0004121!2.49e-12!169;UBERON:0000924!7.96e-12!173;UBERON:0006601!7.96e-12!173;UBERON:0000200!1.67e-11!6;UBERON:0002420!3.85e-10!9;UBERON:0007245!3.85e-10!9;UBERON:0010009!3.85e-10!9;UBERON:0010011!3.85e-10!9;UBERON:0000454!3.85e-10!9;UBERON:0009663!3.29e-09!7;UBERON:0001872!4.29e-09!5;UBERON:0002771!4.47e-09!3;UBERON:0002021!5.16e-09!5;UBERON:0001871!1.51e-08!7;UBERON:0000025!2.40e-08!194;UBERON:0000473!3.67e-08!8;UBERON:0000988!6.04e-08!3;UBERON:0006331!8.71e-08!3;UBERON:0002298!2.91e-07!8;UBERON:0003076!3.55e-07!15;UBERON:0003057!3.55e-07!15;UBERON:0004733!6.56e-07!12;UBERON:0002028!6.56e-07!12;UBERON:0007277!6.56e-07!12;UBERON:0002680!7.55e-07!9;UBERON:0001895!7.55e-07!9;UBERON:0010092!7.55e-07!9|ontology_enrichment_uberon_v019=UBERON:0001873;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0001869;3.23e-09;32!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0001893;2.57e-08;34!UBERON:0002791;2.61e-08;32!UBERON:0001872;4.93e-07;5!UBERON:0003528;5.79e-07;34!UBERON:0002020;5.79e-07;34!UBERON:0002021;6.04e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.78e-15,2;UBERON:0010122,1.78e-15,2;UBERON:0005383,8.99e-11,3;UBERON:0005382,8.99e-11,3;UBERON:0002791,1.96e-08,32;UBERON:0001869,1.96e-08,32;UBERON:0000369,2.11e-08,4;UBERON:0002435,2.11e-08,4;UBERON:0000204,2.11e-08,4;UBERON:0010082,2.11e-08,4;UBERON:0003528,5.46e-08,34;UBERON:0002020,5.46e-08,34;UBERON:0001893,5.46e-08,34;UBERON:0001872,4.79e-07,5;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68;UBERON:0002021,6.77e-07,5;UBERON:0002780,9.24e-07,41;UBERON:0001890,9.24e-07,41;UBERON:0003080,9.24e-07,41;UBERON:0006240,9.24e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0.243947412259191,0.530119073285941,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,0,1.77148277162768,0.120596438625408,0,0.442317039724898,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,1.20258735531594,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0.229073192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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100616138 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=41653 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-55bp_to_NR_039950_5end | |||
|description=CAGE_peak_2_at_MIR4787_5end | |||
|id=chr3:50712444..50712455,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.05e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.73e-38!57;UBERON:0005068!9.73e-38!57;UBERON:0006241!9.73e-38!57;UBERON:0007135!9.73e-38!57;UBERON:0001893!1.33e-34!34;UBERON:0002020!1.47e-34!34;UBERON:0003528!1.47e-34!34;UBERON:0002616!9.26e-34!59;UBERON:0000955!1.62e-33!69;UBERON:0006238!1.62e-33!69;UBERON:0002780!4.50e-33!41;UBERON:0001890!4.50e-33!41;UBERON:0006240!4.50e-33!41;UBERON:0002791!1.86e-32!33;UBERON:0001017!2.20e-32!82;UBERON:0003080!3.94e-32!42;UBERON:0001869!4.22e-31!32;UBERON:0005743!1.98e-30!86;UBERON:0000073!5.44e-30!94;UBERON:0001016!5.44e-30!94;UBERON:0003075!5.09e-27!86;UBERON:0007284!5.09e-27!86;UBERON:0002619!1.02e-26!22;UBERON:0001950!8.12e-26!20;UBERON:0002346!2.14e-25!90;UBERON:0007023!2.61e-25!115;UBERON:0000956!4.18e-23!25;UBERON:0000203!4.18e-23!25;UBERON:0003056!7.89e-22!61;UBERON:0000033!4.24e-16!123;UBERON:0000153!6.23e-15!129;UBERON:0007811!6.23e-15!129;UBERON:0002308!3.97e-13!9;UBERON:0000125!3.97e-13!9;UBERON:0004121!2.49e-12!169;UBERON:0000924!7.96e-12!173;UBERON:0006601!7.96e-12!173;UBERON:0000200!1.67e-11!6;UBERON:0002420!3.85e-10!9;UBERON:0007245!3.85e-10!9;UBERON:0010009!3.85e-10!9;UBERON:0010011!3.85e-10!9;UBERON:0000454!3.85e-10!9;UBERON:0009663!3.29e-09!7;UBERON:0001872!4.29e-09!5;UBERON:0002771!4.47e-09!3;UBERON:0002021!5.16e-09!5;UBERON:0001871!1.51e-08!7;UBERON:0000025!2.40e-08!194;UBERON:0000473!3.67e-08!8;UBERON:0000988!6.04e-08!3;UBERON:0006331!8.71e-08!3;UBERON:0002298!2.91e-07!8;UBERON:0003076!3.55e-07!15;UBERON:0003057!3.55e-07!15;UBERON:0004733!6.56e-07!12;UBERON:0002028!6.56e-07!12;UBERON:0007277!6.56e-07!12;UBERON:0002680!7.55e-07!9;UBERON:0001895!7.55e-07!9;UBERON:0010092!7.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;2.05e-15;2!UBERON:0005383;9.90e-11;3!UBERON:0005382;9.90e-11;3!UBERON:0001869;3.23e-09;32!UBERON:0000369;2.26e-08;4!UBERON:0002435;2.26e-08;4!UBERON:0000204;2.26e-08;4!UBERON:0001893;2.57e-08;34!UBERON:0002791;2.61e-08;32!UBERON:0001872;4.93e-07;5!UBERON:0003528;5.79e-07;34!UBERON:0002020;5.79e-07;34!UBERON:0002021;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.78e-15,2;UBERON:0010122,1.78e-15,2;UBERON:0005383,8.99e-11,3;UBERON:0005382,8.99e-11,3;UBERON:0002791,1.96e-08,32;UBERON:0001869,1.96e-08,32;UBERON:0000369,2.11e-08,4;UBERON:0002435,2.11e-08,4;UBERON:0000204,2.11e-08,4;UBERON:0010082,2.11e-08,4;UBERON:0003528,5.46e-08,34;UBERON:0002020,5.46e-08,34;UBERON:0001893,5.46e-08,34;UBERON:0001872,4.79e-07,5;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68;UBERON:0002021,6.77e-07,5;UBERON:0002780,9.24e-07,41;UBERON:0001890,9.24e-07,41;UBERON:0003080,9.24e-07,41;UBERON:0006240,9.24e-07,41 | |||
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|short_description=p2@MIR4787 | |||
}} |
Revision as of 00:43, 13 September 2013
Short description: | p2@MIR4787 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MIR4787_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_NR_039950_5end |
EntrezGene: | MIR4787 |
HGNC: | 41653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.78e-15 | 2 |
future caudate nucleus | 1.78e-15 | 2 |
caudate-putamen | 8.99e-11 | 3 |
dorsal striatum | 8.99e-11 | 3 |
regional part of telencephalon | 1.96e-08 | 32 |
cerebral hemisphere | 1.96e-08 | 32 |
corpus striatum | 2.11e-08 | 4 |
striatum | 2.11e-08 | 4 |
ventral part of telencephalon | 2.11e-08 | 4 |
future corpus striatum | 2.11e-08 | 4 |
brain grey matter | 5.46e-08 | 34 |
gray matter | 5.46e-08 | 34 |
telencephalon | 5.46e-08 | 34 |
parietal lobe | 4.79e-07 | 5 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
occipital lobe | 6.77e-07 | 5 |
regional part of forebrain | 9.24e-07 | 41 |
forebrain | 9.24e-07 | 41 |
anterior neural tube | 9.24e-07 | 41 |
future forebrain | 9.24e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.26e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.