FFCP PHASE1:Mm9::chr13:38595449..38595455,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:38595449..38595455,-|id=chr13:38595449..38595455,-|ontology_enrichment_celltype=CL:0000553!7.61e-13!6;CL:0000556!7.61e-13!6;CL:0000988!7.22e-09!32;CL:0002032!7.22e-09!32;CL:0000037!7.22e-09!32;CL:0000566!7.22e-09!32;CL:0000837!7.22e-09!32;CL:0000050!2.01e-08!9;CL:0002031!4.44e-08!25;CL:0000414!8.20e-07!11;CL:0000049!9.89e-07!19|ontology_enrichment_celltype_v019_2=CL:0000553,8.13e-23,6;CL:0000556,8.13e-23,6;CL:0000945,9.51e-16,1;CL:0000236,9.51e-16,1;CL:0000826,9.51e-16,1;CL:0000050,1.69e-15,9;CL:0000839,5.70e-11,13;CL:0002031,5.78e-10,25;CL:0000763,4.76e-09,16;CL:0000988,6.80e-08,32;CL:0002032,6.80e-08,32;CL:0000037,6.80e-08,32;CL:0000837,6.80e-08,32;CL:0000049,9.99e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.68e-10!48;UBERON:0002465!6.32e-09!3;UBERON:0002405!4.79e-08!70;UBERON:0002106!5.89e-08!6;UBERON:0004457!5.89e-08!6;UBERON:0000042!5.89e-08!6;UBERON:0004854!5.89e-08!6;UBERON:0009034!5.89e-08!6;UBERON:0002095!5.89e-08!6;UBERON:0004782!5.89e-08!6;UBERON:0003281!5.89e-08!6;UBERON:0009664!5.89e-08!6;UBERON:0002296!5.89e-08!6;UBERON:0005602!5.89e-08!6;UBERON:0001179!5.89e-08!6;UBERON:0006293!5.89e-08!6;UBERON:0003887!4.66e-07!10;UBERON:0002390!6.98e-07!45;UBERON:0003061!6.98e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.33e-15,1;UBERON:0001097,1.33e-15,1;UBERON:0003968,1.33e-15,1;UBERON:0001467,1.33e-15,1;UBERON:0001474,3.39e-11,22;UBERON:0004765,3.39e-11,22;UBERON:0001434,3.39e-11,22;UBERON:0002371,4.76e-09,16;UBERON:0002204,7.40e-08,32|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0.342401459862411,0.34968160967599,0.666219523631325,0.809901069559304,0,7.09789872056035,4.9361196098066,6.79023442876848,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0,0.11981512450592,0,0.508280908292259,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:38595449..38595455,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:38595449..38595455,- | |||
|id=chr13:38595449..38595455,- | |||
|ontology_enrichment_celltype=CL:0000553!7.61e-13!6;CL:0000556!7.61e-13!6;CL:0000988!7.22e-09!32;CL:0002032!7.22e-09!32;CL:0000037!7.22e-09!32;CL:0000566!7.22e-09!32;CL:0000837!7.22e-09!32;CL:0000050!2.01e-08!9;CL:0002031!4.44e-08!25;CL:0000414!8.20e-07!11;CL:0000049!9.89e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.13e-23,6;CL:0000556,8.13e-23,6;CL:0000945,9.51e-16,1;CL:0000236,9.51e-16,1;CL:0000826,9.51e-16,1;CL:0000050,1.69e-15,9;CL:0000839,5.70e-11,13;CL:0002031,5.78e-10,25;CL:0000763,4.76e-09,16;CL:0000988,6.80e-08,32;CL:0002032,6.80e-08,32;CL:0000037,6.80e-08,32;CL:0000837,6.80e-08,32;CL:0000049,9.99e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.68e-10!48;UBERON:0002465!6.32e-09!3;UBERON:0002405!4.79e-08!70;UBERON:0002106!5.89e-08!6;UBERON:0004457!5.89e-08!6;UBERON:0000042!5.89e-08!6;UBERON:0004854!5.89e-08!6;UBERON:0009034!5.89e-08!6;UBERON:0002095!5.89e-08!6;UBERON:0004782!5.89e-08!6;UBERON:0003281!5.89e-08!6;UBERON:0009664!5.89e-08!6;UBERON:0002296!5.89e-08!6;UBERON:0005602!5.89e-08!6;UBERON:0001179!5.89e-08!6;UBERON:0006293!5.89e-08!6;UBERON:0003887!4.66e-07!10;UBERON:0002390!6.98e-07!45;UBERON:0003061!6.98e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.33e-15,1;UBERON:0001097,1.33e-15,1;UBERON:0003968,1.33e-15,1;UBERON:0001467,1.33e-15,1;UBERON:0001474,3.39e-11,22;UBERON:0004765,3.39e-11,22;UBERON:0001434,3.39e-11,22;UBERON:0002371,4.76e-09,16;UBERON:0002204,7.40e-08,32 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0.342401459862411,0.34968160967599,0.666219523631325,0.809901069559304,0,7.09789872056035,4.9361196098066,6.79023442876848,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0,0.11981512450592,0,0.508280908292259,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:38595449..38595455,- | |||
}} |
Revision as of 00:28, 13 September 2013
Short description: | p@chr13:38595449..38595455, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:38595449..38595455, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.13e-23 | 6 |
megakaryocyte | 8.13e-23 | 6 |
lymphocyte of B lineage | 9.51e-16 | 1 |
B cell | 9.51e-16 | 1 |
pro-B cell | 9.51e-16 | 1 |
megakaryocyte-erythroid progenitor cell | 1.69e-15 | 9 |
myeloid lineage restricted progenitor cell | 5.70e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 5.78e-10 | 25 |
myeloid cell | 4.76e-09 | 16 |
hematopoietic cell | 6.80e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.80e-08 | 32 |
hematopoietic stem cell | 6.80e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.80e-08 | 32 |
common myeloid progenitor | 9.99e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.33e-15 | 1 |
axillary lymph node | 1.33e-15 | 1 |
peripheral lymph node | 1.33e-15 | 1 |
shoulder | 1.33e-15 | 1 |
bone element | 3.39e-11 | 22 |
skeletal element | 3.39e-11 | 22 |
skeletal system | 3.39e-11 | 22 |
bone marrow | 4.76e-09 | 16 |
musculoskeletal system | 7.40e-08 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.