FFCP PHASE1:Mm9::chr13:37531937..37531958,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2067|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:37531937..37531958,-|id=chr13:37531937..37531958,-|ontology_enrichment_celltype=CL:0000553!1.22e-08!6;CL:0000556!1.22e-08!6|ontology_enrichment_celltype_v019_2=CL:0000553,4.88e-24,6;CL:0000556,4.88e-24,6;CL:0002031,4.38e-17,25;CL:0000050,3.54e-16,9;CL:0000988,2.66e-13,32;CL:0002032,2.66e-13,32;CL:0000037,2.66e-13,32;CL:0000837,2.66e-13,32;CL:0000839,2.58e-11,13;CL:0000945,1.03e-09,1;CL:0000236,1.03e-09,1;CL:0000826,1.03e-09,1;CL:0000763,2.97e-09,16;CL:0002320,3.64e-09,46;CL:0000134,3.64e-09,46;CL:0000049,7.75e-08,19;CL:0000219,9.36e-08,54;CL:0000838,3.34e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!8.28e-08!6;UBERON:0004457!8.28e-08!6;UBERON:0000042!8.28e-08!6;UBERON:0004854!8.28e-08!6;UBERON:0009034!8.28e-08!6;UBERON:0002095!8.28e-08!6;UBERON:0004782!8.28e-08!6;UBERON:0003281!8.28e-08!6;UBERON:0009664!8.28e-08!6;UBERON:0002296!8.28e-08!6;UBERON:0005602!8.28e-08!6;UBERON:0001179!8.28e-08!6;UBERON:0006293!8.28e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.62e-10,1;UBERON:0001097,5.62e-10,1;UBERON:0003968,5.62e-10,1;UBERON:0001467,5.62e-10,1;UBERON:0002371,2.97e-09,16;UBERON:0002384,3.64e-09,46;UBERON:0002193,1.02e-08,48;UBERON:0002405,1.02e-08,48;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45;UBERON:0001474,8.39e-07,22;UBERON:0004765,8.39e-07,22;UBERON:0001434,8.39e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0,5.99378114180652,6.44437837946972,2.97072756258621,0,2.28369187762036,9.40319240900167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0.206386867963223,0,0.188368457004691,2.59719032669948,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p@chr13:37531937..37531958,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2067 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:37531937..37531958,- | |||
|id=chr13:37531937..37531958,- | |||
|ontology_enrichment_celltype=CL:0000553!1.22e-08!6;CL:0000556!1.22e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.88e-24,6;CL:0000556,4.88e-24,6;CL:0002031,4.38e-17,25;CL:0000050,3.54e-16,9;CL:0000988,2.66e-13,32;CL:0002032,2.66e-13,32;CL:0000037,2.66e-13,32;CL:0000837,2.66e-13,32;CL:0000839,2.58e-11,13;CL:0000945,1.03e-09,1;CL:0000236,1.03e-09,1;CL:0000826,1.03e-09,1;CL:0000763,2.97e-09,16;CL:0002320,3.64e-09,46;CL:0000134,3.64e-09,46;CL:0000049,7.75e-08,19;CL:0000219,9.36e-08,54;CL:0000838,3.34e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.28e-08!6;UBERON:0004457!8.28e-08!6;UBERON:0000042!8.28e-08!6;UBERON:0004854!8.28e-08!6;UBERON:0009034!8.28e-08!6;UBERON:0002095!8.28e-08!6;UBERON:0004782!8.28e-08!6;UBERON:0003281!8.28e-08!6;UBERON:0009664!8.28e-08!6;UBERON:0002296!8.28e-08!6;UBERON:0005602!8.28e-08!6;UBERON:0001179!8.28e-08!6;UBERON:0006293!8.28e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.62e-10,1;UBERON:0001097,5.62e-10,1;UBERON:0003968,5.62e-10,1;UBERON:0001467,5.62e-10,1;UBERON:0002371,2.97e-09,16;UBERON:0002384,3.64e-09,46;UBERON:0002193,1.02e-08,48;UBERON:0002405,1.02e-08,48;UBERON:0002390,6.11e-07,45;UBERON:0003061,6.11e-07,45;UBERON:0001474,8.39e-07,22;UBERON:0004765,8.39e-07,22;UBERON:0001434,8.39e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.61980213911861,0,5.99378114180652,6.44437837946972,2.97072756258621,0,2.28369187762036,9.40319240900167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,2.07150306917737,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02522528478712,0.206386867963223,0,0.188368457004691,2.59719032669948,0.915112692826091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.280924522409647,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr13:37531937..37531958,- | |||
}} |
Revision as of 00:27, 13 September 2013
Short description: | p@chr13:37531937..37531958, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:37531937..37531958, - |
Coexpression cluster: | MCL_coexpression_mm9:2067 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.88e-24 | 6 |
megakaryocyte | 4.88e-24 | 6 |
hematopoietic lineage restricted progenitor cell | 4.38e-17 | 25 |
megakaryocyte-erythroid progenitor cell | 3.54e-16 | 9 |
hematopoietic cell | 2.66e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.66e-13 | 32 |
hematopoietic stem cell | 2.66e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.66e-13 | 32 |
myeloid lineage restricted progenitor cell | 2.58e-11 | 13 |
lymphocyte of B lineage | 1.03e-09 | 1 |
B cell | 1.03e-09 | 1 |
pro-B cell | 1.03e-09 | 1 |
myeloid cell | 2.97e-09 | 16 |
connective tissue cell | 3.64e-09 | 46 |
mesenchymal cell | 3.64e-09 | 46 |
common myeloid progenitor | 7.75e-08 | 19 |
motile cell | 9.36e-08 | 54 |
lymphoid lineage restricted progenitor cell | 3.34e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.62e-10 | 1 |
axillary lymph node | 5.62e-10 | 1 |
peripheral lymph node | 5.62e-10 | 1 |
shoulder | 5.62e-10 | 1 |
bone marrow | 2.97e-09 | 16 |
connective tissue | 3.64e-09 | 46 |
hemolymphoid system | 1.02e-08 | 48 |
immune system | 1.02e-08 | 48 |
hematopoietic system | 6.11e-07 | 45 |
blood island | 6.11e-07 | 45 |
bone element | 8.39e-07 | 22 |
skeletal element | 8.39e-07 | 22 |
skeletal system | 8.39e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.