FFCP PHASE1:Mm9::chr13:3610310..3610364,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=105203|HGNC=|MCL_coexpression_id=301|UniProt=Q5DTT3,E9PYT9,Q3TAG2|association_with_transcript=0bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end|description=CAGE_peak_1_at_BC016423_5end|id=chr13:3610310..3610364,-|ontology_enrichment_celltype=CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,7.67e-07,9;CL:0000789,7.67e-07,9;CL:0002420,7.67e-07,9;CL:0002419,7.67e-07,9;CL:0000790,7.67e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!1.27e-10!147;UBERON:0003408!1.80e-07!24;UBERON:0002370!2.75e-07!23;UBERON:0000974!2.75e-07!23;UBERON:0004807!2.75e-07!23;UBERON:0005058!2.75e-07!23;UBERON:0003351!2.75e-07!23;UBERON:0009113!2.75e-07!23;UBERON:0003295!2.75e-07!23;UBERON:0009722!2.75e-07!23;UBERON:0005562!2.75e-07!23;UBERON:0007690!2.75e-07!23;UBERON:0006562!8.36e-07!24;UBERON:0001557!8.36e-07!24;UBERON:0001042!8.36e-07!24;UBERON:0008814!8.36e-07!24;UBERON:0009145!8.36e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000153,6.26e-12,43;UBERON:0007811,1.20e-08,36;UBERON:0003408,1.80e-07,24;UBERON:0002370,2.75e-07,23;UBERON:0000974,2.75e-07,23;UBERON:0004807,2.75e-07,23;UBERON:0005058,2.75e-07,23;UBERON:0003351,2.75e-07,23;UBERON:0009113,2.75e-07,23;UBERON:0003295,2.75e-07,23;UBERON:0009722,2.75e-07,23;UBERON:0005562,2.75e-07,23;UBERON:0007690,2.75e-07,23;UBERON:0001048,6.40e-07,134;UBERON:0006562,8.36e-07,24;UBERON:0001557,8.36e-07,24;UBERON:0001042,8.36e-07,24;UBERON:0008814,8.36e-07,24;UBERON:0009145,8.36e-07,24|phase1_expression=15.534438169165,8.37540978334467,9.09998478779072,12.0985684522732,13.023288978605,12.0873075776561,8.87728034262997,23.8878148366916,73.49171296317,88.2423264233915,36.2982092638071,36.2165601838827,26.3649124094057,31.2090836635821,9.99329285446988,8.09901069559304,3.49780939064073,10.0947892914636,11.6547268564878,6.36584477697045,9.35476191661768,11.2198774857,11.2315909329742,5.59973479776923,3.67054849707472,8.03924749761028,5.1691439539089,7.75696437669201,4.18051522804023,6.04872311423834,5.98672378769323,13.9706748161119,20.9122027778754,63.3926724061755,10.6875099307972,5.81821258754723,9.80012910059372,2.09265815368454,0.7813353445238,2.09409497589519,2.35292595212406,3.41522742479223,2.91306211818692,13.7227531593379,15.0037858204882,12.664725899156,4.69434806608824,1.09012578190223,1.31811709640683,1.94429899074283,1.25987779462826,0,7.71799987865587,15.9579671242496,23.8626597391149,9.26133969729409,7.16333599846892,3.6097046459421,4.85559506063035,8.46385566835253,6.97214543856797,4.40497891689872,2.66788438833342,0.899899717281399,0,0,3.29560121570245,2.30530983192933,12.9612015385597,6.07526722492608,8.62332341540666,3.14216082844184,4.41737081903227,10.9016811301309,8.53024692062304,6.43453150627015,7.70811166995721,5.36286819957788,5.22262213071228,5.40733779693795,5.48925861614458,6.25096044668112,2.79182999001381,4.50210088025344,4.27835093775068,7.95497180778903,6.54909731675874,5.77838282058432,12.7977266733081,8.69072941228034,11.5945795480671,6.0229671388697,8.83962733820076,4.85732872474035,6.49776417447669,8.51251085484938,7.72444310724635,13.2935651610885,9.35229616570328,5.3000936176551,12.2533775205712,7.69958864485907,40.7688383530633,28.4426681261332,3.030874574157,7.60079596425296,4.54972000513305,8.79215873836762,25.1169747137757,9.05497048295431,10.235634279202,10.3518262626128,9.22461989024234,8.59119051149949,10.7005723493491,6.6603293404728,16.0676729027343,7.51916655983541,7.96149496754887,11.1619126463712,9.71702681225732,8.24287930329878,1.86391761218122,9.07620470735796,7.12118803165747,7.66371165625774,8.38705871541442,3.59941638596045,4.82866862877646,4.19413790333504,7.32000964509802,19.6020789296068,7.47444576826789,7.41574826257959,6.02585329222724,6.65189178577806,14.155671575194,8.08645308965605,8.59257378674494,9.89076722666428,21.3397526458834,14.7137346837423,17.4660265911189,15.0704817835715,15.3082123090488,15.373646434182,14.8985742049969,12.6764651662118,16.383167462896,29.311442426012,26.0407663762644,16.4396799320681,22.2437799380478,21.5916343243743,18.7261744131229,23.2870092177637,4.21327912387941,3.86021860672073,3.40996199274711,16.7771875753757,17.3549284386011,13.3245925481151,14.2046841351126,13.5767319905709,12.0328348052155,10.2314935690179,12.6088498657821,10.5088808130453,9.2153515951549,10.1783827729039,8.431156192769,10.2339991197733,9.66020507280623,7.38135303182045,7.36014819974445,18.4199256158919,8.26046957459495,8.19796756656987,25.5945900642281,26.0105072483691,18.6857818917035,10.8909103296605,11.1189021922435,8.17970192284004,9.01605216934572,6.75265714368445,8.54539709920916,6.16765063327568,10.7230247915516,11.6846523125049,6.05186539649144,7.96565093017469,6.44870863240478,18.6225075553858,19.1603150644237,17.1067115390064,14.9343415119072,12.6244475802573,12.1414151278574,8.26616828685772,8.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| ||
|EntrezGene=105203 | |||
|HGNC= | |||
|MCL_coexpression_id=301 | |||
|UniProt=Q5DTT3,E9PYT9,Q3TAG2 | |||
|association_with_transcript=0bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end | |||
|description=CAGE_peak_1_at_BC016423_5end | |||
|id=chr13:3610310..3610364,- | |||
|ontology_enrichment_celltype=CL:0000791!7.67e-07!9;CL:0000789!7.67e-07!9;CL:0002420!7.67e-07!9;CL:0002419!7.67e-07!9;CL:0000790!7.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.67e-07,9;CL:0000789,7.67e-07,9;CL:0002420,7.67e-07,9;CL:0002419,7.67e-07,9;CL:0000790,7.67e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.27e-10!147;UBERON:0003408!1.80e-07!24;UBERON:0002370!2.75e-07!23;UBERON:0000974!2.75e-07!23;UBERON:0004807!2.75e-07!23;UBERON:0005058!2.75e-07!23;UBERON:0003351!2.75e-07!23;UBERON:0009113!2.75e-07!23;UBERON:0003295!2.75e-07!23;UBERON:0009722!2.75e-07!23;UBERON:0005562!2.75e-07!23;UBERON:0007690!2.75e-07!23;UBERON:0006562!8.36e-07!24;UBERON:0001557!8.36e-07!24;UBERON:0001042!8.36e-07!24;UBERON:0008814!8.36e-07!24;UBERON:0009145!8.36e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,6.26e-12,43;UBERON:0007811,1.20e-08,36;UBERON:0003408,1.80e-07,24;UBERON:0002370,2.75e-07,23;UBERON:0000974,2.75e-07,23;UBERON:0004807,2.75e-07,23;UBERON:0005058,2.75e-07,23;UBERON:0003351,2.75e-07,23;UBERON:0009113,2.75e-07,23;UBERON:0003295,2.75e-07,23;UBERON:0009722,2.75e-07,23;UBERON:0005562,2.75e-07,23;UBERON:0007690,2.75e-07,23;UBERON:0001048,6.40e-07,134;UBERON:0006562,8.36e-07,24;UBERON:0001557,8.36e-07,24;UBERON:0001042,8.36e-07,24;UBERON:0008814,8.36e-07,24;UBERON:0009145,8.36e-07,24 | |||
|phase1_expression=15.534438169165,8.37540978334467,9.09998478779072,12.0985684522732,13.023288978605,12.0873075776561,8.87728034262997,23.8878148366916,73.49171296317,88.2423264233915,36.2982092638071,36.2165601838827,26.3649124094057,31.2090836635821,9.99329285446988,8.09901069559304,3.49780939064073,10.0947892914636,11.6547268564878,6.36584477697045,9.35476191661768,11.2198774857,11.2315909329742,5.59973479776923,3.67054849707472,8.03924749761028,5.1691439539089,7.75696437669201,4.18051522804023,6.04872311423834,5.98672378769323,13.9706748161119,20.9122027778754,63.3926724061755,10.6875099307972,5.81821258754723,9.80012910059372,2.09265815368454,0.7813353445238,2.09409497589519,2.35292595212406,3.41522742479223,2.91306211818692,13.7227531593379,15.0037858204882,12.664725899156,4.69434806608824,1.09012578190223,1.31811709640683,1.94429899074283,1.25987779462826,0,7.71799987865587,15.9579671242496,23.8626597391149,9.26133969729409,7.16333599846892,3.6097046459421,4.85559506063035,8.46385566835253,6.97214543856797,4.40497891689872,2.66788438833342,0.899899717281399,0,0,3.29560121570245,2.30530983192933,12.9612015385597,6.07526722492608,8.62332341540666,3.14216082844184,4.41737081903227,10.9016811301309,8.53024692062304,6.43453150627015,7.70811166995721,5.36286819957788,5.22262213071228,5.40733779693795,5.48925861614458,6.25096044668112,2.79182999001381,4.50210088025344,4.27835093775068,7.95497180778903,6.54909731675874,5.77838282058432,12.7977266733081,8.69072941228034,11.5945795480671,6.0229671388697,8.83962733820076,4.85732872474035,6.49776417447669,8.51251085484938,7.72444310724635,13.2935651610885,9.35229616570328,5.3000936176551,12.2533775205712,7.69958864485907,40.7688383530633,28.4426681261332,3.030874574157,7.60079596425296,4.54972000513305,8.79215873836762,25.1169747137757,9.05497048295431,10.235634279202,10.3518262626128,9.22461989024234,8.59119051149949,10.7005723493491,6.6603293404728,16.0676729027343,7.51916655983541,7.96149496754887,11.1619126463712,9.71702681225732,8.24287930329878,1.86391761218122,9.07620470735796,7.12118803165747,7.66371165625774,8.38705871541442,3.59941638596045,4.82866862877646,4.19413790333504,7.32000964509802,19.6020789296068,7.47444576826789,7.41574826257959,6.02585329222724,6.65189178577806,14.155671575194,8.08645308965605,8.59257378674494,9.89076722666428,21.3397526458834,14.7137346837423,17.4660265911189,15.0704817835715,15.3082123090488,15.373646434182,14.8985742049969,12.6764651662118,16.383167462896,29.311442426012,26.0407663762644,16.4396799320681,22.2437799380478,21.5916343243743,18.7261744131229,23.2870092177637,4.21327912387941,3.86021860672073,3.40996199274711,16.7771875753757,17.3549284386011,13.3245925481151,14.2046841351126,13.5767319905709,12.0328348052155,10.2314935690179,12.6088498657821,10.5088808130453,9.2153515951549,10.1783827729039,8.431156192769,10.2339991197733,9.66020507280623,7.38135303182045,7.36014819974445,18.4199256158919,8.26046957459495,8.19796756656987,25.5945900642281,26.0105072483691,18.6857818917035,10.8909103296605,11.1189021922435,8.17970192284004,9.01605216934572,6.75265714368445,8.54539709920916,6.16765063327568,10.7230247915516,11.6846523125049,6.05186539649144,7.96565093017469,6.44870863240478,18.6225075553858,19.1603150644237,17.1067115390064,14.9343415119072,12.6244475802573,12.1414151278574,8.26616828685772,8.79192875911699,8.76119863844784,5.03969466048153,15.6834399373128,14.7419246334902,12.5922782935518,11.9687471619217,10.8529721888588,6.87489799809833,13.5217184601881,14.2678999562031,8.51140380883053,15.814502718009,10.7920874823866,11.8574315783533,11.1134706296729,9.32866550313943,8.20153986317724,10.5309318394965,24.0654092948516,19.5557971730431,15.6165478913173,15.4895563870411,15.5780819420889,11.6641384034147,14.0496226457615,17.8127712839996,13.0664166892777,11.3212885746816,11.9620219742489,13.1240586218081,7.37710198765709,1.50791283939272,3.80733978673097,17.2117495556663,16.0043312856745,4.49541651965817,4.45404409050372,11.3115112309906,8.33154059774431,13.566853434899,12.8844785617891,12.2791336707695,19.8344102300618,15.1503098376028,15.286132662597,14.1683745586213,14.028281179743,16.2067988958075,12.5315313404505,12.7746076687442,10.5058706163681,13.3567306669932,12.2077890999676,18.5843193675948,16.2663026223838,13.9068836203785,19.8035333743693,16.832207894204,21.213025208131,17.573123935439,13.0872142611902,17.4683715408513,18.3301319602773,14.7586052004998,16.5016869197099,15.6602218646742,21.7873923777885,5.56242340265844,12.6458850668639,16.3153014950892,13.7343989553594,14.973960874793,5.78483403317739,10.7948985709307,11.0152676849186,13.6727606794076,15.4993077764991,11.3025098687134,15.1385441569671,13.966564248367,19.3686261699172,7.28702091574627,7.6024373824309,10.2522528478712,14.859854493352,12.0376442790313,8.85331747922048,12.4391747226133,10.2950177942935,20.7373684592503,13.4353394230712,14.3727972756601,1.90934123603023,26.5722234608154,19.3153493770506,14.3647103292996,16.51797538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| |||
|short_description=p1@BC016423 | |||
}} |
Revision as of 00:26, 13 September 2013
Short description: | p1@BC016423 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC016423_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 0bp_to_ENSMUST00000096069, ENSMUST00000110712, NM_134063, uc007pix.1, uc007piy.1_5end |
EntrezGene: | BC016423 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.67e-07 | 9 |
alpha-beta T cell | 7.67e-07 | 9 |
immature T cell | 7.67e-07 | 9 |
mature T cell | 7.67e-07 | 9 |
immature alpha-beta T cell | 7.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 6.26e-12 | 43 |
craniocervical region | 1.20e-08 | 36 |
gland of gut | 1.80e-07 | 24 |
thymus | 2.75e-07 | 23 |
neck | 2.75e-07 | 23 |
respiratory system epithelium | 2.75e-07 | 23 |
hemolymphoid system gland | 2.75e-07 | 23 |
pharyngeal epithelium | 2.75e-07 | 23 |
thymic region | 2.75e-07 | 23 |
pharyngeal gland | 2.75e-07 | 23 |
entire pharyngeal arch endoderm | 2.75e-07 | 23 |
thymus primordium | 2.75e-07 | 23 |
early pharyngeal endoderm | 2.75e-07 | 23 |
primordium | 6.40e-07 | 134 |
pharynx | 8.36e-07 | 24 |
upper respiratory tract | 8.36e-07 | 24 |
chordate pharynx | 8.36e-07 | 24 |
pharyngeal arch system | 8.36e-07 | 24 |
pharyngeal region of foregut | 8.36e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.