FFCP PHASE1:Mm9::chr12:87810964..87810976,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=97|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:87810964..87810976,-|id=chr12:87810964..87810976,-|ontology_enrichment_celltype=CL:0000349!1.19e-23!3;CL:0000351!1.19e-23!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-86,3;CL:0000351,1.58e-86,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!4.03e-25!18;UBERON:0005564!4.03e-25!18;UBERON:0000473!5.77e-25!14;UBERON:0000358!1.19e-23!3;UBERON:0000307!1.19e-23!3;UBERON:0003135!2.78e-23!15;UBERON:0003101!8.26e-22!16;UBERON:0000079!8.26e-22!16;UBERON:0004176!1.65e-20!17;UBERON:0009196!1.65e-20!17;UBERON:0009117!1.65e-20!17;UBERON:0003133!1.01e-18!24;UBERON:0005156!3.03e-17!26;UBERON:0000990!3.03e-17!26;UBERON:0002323!5.96e-12!37;UBERON:0004458!5.96e-12!37;UBERON:0003886!1.27e-11!38;UBERON:0002553!2.62e-11!39;UBERON:0000464!1.57e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.58e-86,3;UBERON:0000307,1.58e-86,3;UBERON:0007010,1.58e-86,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,2.87084341150322,1.17519231454855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:87810964..87810976,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:87810964..87810976,- | |||
|id=chr12:87810964..87810976,- | |||
|ontology_enrichment_celltype=CL:0000349!1.19e-23!3;CL:0000351!1.19e-23!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.58e-86,3;CL:0000351,1.58e-86,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!4.03e-25!18;UBERON:0005564!4.03e-25!18;UBERON:0000473!5.77e-25!14;UBERON:0000358!1.19e-23!3;UBERON:0000307!1.19e-23!3;UBERON:0003135!2.78e-23!15;UBERON:0003101!8.26e-22!16;UBERON:0000079!8.26e-22!16;UBERON:0004176!1.65e-20!17;UBERON:0009196!1.65e-20!17;UBERON:0009117!1.65e-20!17;UBERON:0003133!1.01e-18!24;UBERON:0005156!3.03e-17!26;UBERON:0000990!3.03e-17!26;UBERON:0002323!5.96e-12!37;UBERON:0004458!5.96e-12!37;UBERON:0003886!1.27e-11!38;UBERON:0002553!2.62e-11!39;UBERON:0000464!1.57e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.58e-86,3;UBERON:0000307,1.58e-86,3;UBERON:0007010,1.58e-86,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99787358036658,2.87084341150322,1.17519231454855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:87810964..87810976,- | |||
}} |
Revision as of 23:32, 12 September 2013
Short description: | p@chr12:87810964..87810976, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:87810964..87810976, - |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.58e-86 | 3 |
trophoblast cell | 1.58e-86 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.58e-86 | 3 |
blastula | 1.58e-86 | 3 |
cleaving embryo | 1.58e-86 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.