FFCP PHASE1:Mm9::chr12:72238580..72238588,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:72238580..72238588,+|id=chr12:72238580..72238588,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,8.02e-16,3;CL:0002608,1.12e-15,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23;CL:0002609,1.52e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001954,1.64e-07,7;UBERON:0003022,1.64e-07,7;UBERON:0002421,1.64e-07,7;UBERON:0000349,1.64e-07,7;UBERON:0002600,1.64e-07,7;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,1.24599112323707,0.919218786610021,0,0,0,0,1.28082701043374,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:72238580..72238588,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:72238580..72238588,+ | |||
|id=chr12:72238580..72238588,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,8.02e-16,3;CL:0002608,1.12e-15,3;CL:0000117,8.45e-09,23;CL:0000337,8.45e-09,23;CL:0002609,1.52e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.56e-10,5;UBERON:0002435,4.56e-10,5;UBERON:0000204,4.56e-10,5;UBERON:0010082,4.56e-10,5;UBERON:0001954,1.64e-07,7;UBERON:0003022,1.64e-07,7;UBERON:0002421,1.64e-07,7;UBERON:0000349,1.64e-07,7;UBERON:0002600,1.64e-07,7;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29;UBERON:0002420,8.61e-07,8;UBERON:0007245,8.61e-07,8;UBERON:0010009,8.61e-07,8;UBERON:0010011,8.61e-07,8;UBERON:0000454,8.61e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0,0.194429899074283,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,1.24599112323707,0.919218786610021,0,0,0,0,1.28082701043374,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0.288030006257865,0,0,0,0.25984164595559,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:72238580..72238588,+ | |||
}} |
Revision as of 23:06, 12 September 2013
Short description: | p@chr12:72238580..72238588, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:72238580..72238588, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 8.02e-16 | 3 |
hippocampal neuron | 1.12e-15 | 3 |
CNS neuron (sensu Vertebrata) | 8.45e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-09 | 23 |
neuron of cerebral cortex | 1.52e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 4.56e-10 | 5 |
striatum | 4.56e-10 | 5 |
ventral part of telencephalon | 4.56e-10 | 5 |
future corpus striatum | 4.56e-10 | 5 |
Ammon's horn | 1.64e-07 | 7 |
lobe parts of cerebral cortex | 1.64e-07 | 7 |
hippocampal formation | 1.64e-07 | 7 |
limbic system | 1.64e-07 | 7 |
limbic lobe | 1.64e-07 | 7 |
brain grey matter | 3.14e-07 | 29 |
regional part of telencephalon | 3.14e-07 | 29 |
telencephalon | 3.14e-07 | 29 |
basal ganglion | 8.61e-07 | 8 |
nuclear complex of neuraxis | 8.61e-07 | 8 |
aggregate regional part of brain | 8.61e-07 | 8 |
collection of basal ganglia | 8.61e-07 | 8 |
cerebral subcortex | 8.61e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.