FFCP PHASE1:Mm9::chr12:30468710..30468730,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:30468710..30468730,+|id=chr12:30468710..30468730,+|ontology_enrichment_celltype=CL:0000117!4.04e-18!23;CL:0000337!4.04e-18!23;CL:0000540!6.26e-14!33;CL:0000047!6.26e-14!33;CL:0000031!6.26e-14!33;CL:0000404!6.26e-14!33;CL:0000393!1.45e-10!39;CL:0000211!1.45e-10!39;CL:0002319!7.00e-09!43;CL:0000221!1.63e-08!44;CL:0000133!1.63e-08!44;CL:0002609!4.78e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,5.61e-29,23;CL:0000337,5.61e-29,23;CL:0000540,6.40e-19,33;CL:0000047,6.40e-19,33;CL:0000031,6.40e-19,33;CL:0000404,6.40e-19,33;CL:0000393,2.28e-15,39;CL:0000211,2.28e-15,39;CL:0002319,1.48e-13,43;CL:0002609,3.03e-13,6;CL:0000221,3.73e-13,44;CL:0000133,3.73e-13,44;CL:0002610,2.27e-08,3;CL:0002612,1.18e-07,3;CL:0002613,3.05e-07,3;CL:0002608,5.09e-07,3;CL:0002321,8.49e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.40e-30!50;UBERON:0006238!1.40e-30!50;UBERON:0002616!9.84e-30!49;UBERON:0001017!2.65e-29!73;UBERON:0005743!2.65e-29!73;UBERON:0002346!1.27e-28!71;UBERON:0003075!1.27e-28!71;UBERON:0007284!1.27e-28!71;UBERON:0001049!1.39e-28!52;UBERON:0005068!1.39e-28!52;UBERON:0006241!1.39e-28!52;UBERON:0007135!1.39e-28!52;UBERON:0000073!4.79e-28!75;UBERON:0001016!4.79e-28!75;UBERON:0000033!1.14e-27!63;UBERON:0002020!1.81e-26!34;UBERON:0002791!9.74e-26!29;UBERON:0003528!9.74e-26!29;UBERON:0001893!9.74e-26!29;UBERON:0003080!5.95e-25!40;UBERON:0003056!7.56e-25!49;UBERON:0002780!4.99e-24!39;UBERON:0001890!4.99e-24!39;UBERON:0006240!4.99e-24!39;UBERON:0004121!1.70e-23!102;UBERON:0000924!1.70e-23!102;UBERON:0006601!1.70e-23!102;UBERON:0000956!2.89e-18!21;UBERON:0001869!2.89e-18!21;UBERON:0000203!2.89e-18!21;UBERON:0007811!4.64e-16!86;UBERON:0002619!2.42e-14!17;UBERON:0000153!2.00e-13!94;UBERON:0002021!8.69e-13!10;UBERON:0000411!8.69e-13!10;UBERON:0001950!8.69e-13!10;UBERON:0002420!1.55e-08!8;UBERON:0007245!1.55e-08!8;UBERON:0010009!1.55e-08!8;UBERON:0010011!1.55e-08!8;UBERON:0000454!1.55e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.35e-47,34;UBERON:0003528,1.93e-44,29;UBERON:0002791,1.93e-44,29;UBERON:0001893,1.93e-44,29;UBERON:0000073,2.03e-43,54;UBERON:0003080,3.51e-39,40;UBERON:0002780,2.45e-37,39;UBERON:0001890,2.45e-37,39;UBERON:0006240,2.45e-37,39;UBERON:0001049,2.53e-36,52;UBERON:0005068,2.53e-36,52;UBERON:0006241,2.53e-36,52;UBERON:0007135,2.53e-36,52;UBERON:0000956,3.22e-35,21;UBERON:0001869,3.22e-35,21;UBERON:0000203,3.22e-35,21;UBERON:0001017,1.48e-34,73;UBERON:0001016,1.90e-33,75;UBERON:0002616,2.91e-33,46;UBERON:0003056,3.16e-33,49;UBERON:0000955,2.01e-32,47;UBERON:0006238,2.01e-32,47;UBERON:0002346,2.66e-30,64;UBERON:0003075,2.66e-30,64;UBERON:0007284,2.66e-30,64;UBERON:0002619,6.83e-27,17;UBERON:0004121,1.52e-26,95;UBERON:0000924,1.52e-26,95;UBERON:0006601,1.52e-26,95;UBERON:0010371,9.85e-26,73;UBERON:0002021,1.83e-25,10;UBERON:0000411,1.83e-25,10;UBERON:0001950,1.83e-25,10;UBERON:0010314,5.13e-19,92;UBERON:0000025,6.09e-13,114;UBERON:0004111,1.18e-11,122;UBERON:0000369,1.65e-11,5;UBERON:0002435,1.65e-11,5;UBERON:0000204,1.65e-11,5;UBERON:0010082,1.65e-11,5;UBERON:0002420,3.67e-10,8;UBERON:0007245,3.67e-10,8;UBERON:0010009,3.67e-10,8;UBERON:0010011,3.67e-10,8;UBERON:0000454,3.67e-10,8;UBERON:0011216,1.84e-08,194;UBERON:0004684,2.27e-08,3;UBERON:0002275,2.27e-08,3;UBERON:0002257,1.18e-07,3;UBERON:0000483,7.72e-07,174|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,2.48855069540346,2.70011876663381,2.10324961351382,0,0,1.10241719293459,1.15014565221884,1.83843757322004,2.20231761998777,3.95830748064082,4.45458946443106,1.05509030184155,2.37867873366265,1.56274011167028,0.558365998002762,0.56276261003168,3.20876320331301,1.76777151284201,2.84743361598206,1.67759501242771,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,1.3481157546434,2.28750301409313,3.01570445070875,1.39059456153821,3.06858548796397,1.24672826735736,2.10913641988085,0,0,0,0,0,0,0.180062129805349,1.05493372485001,0.272145996605311,0.2562274405697,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.32199371992995,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.390438744296638,0.861693590931196,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0.713475270408282,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,8.74617949363636,12.0308057822273,7.56154002312225,2.74033007908257,3.7769694869485,2.70009000092722,7.20513925158753,3.62513927187364,4.65984280576638,0,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.618105171716683,0.64183841918363,0,0.50695859978048,0,0.37456602987953,0.256100609619477,0.114870937911227,0,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,1.37147700954166,0.887379030796687,0.476872379894642,0.581385666529314,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr12:30468710..30468730,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:30468710..30468730,+ | |||
|id=chr12:30468710..30468730,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.04e-18!23;CL:0000337!4.04e-18!23;CL:0000540!6.26e-14!33;CL:0000047!6.26e-14!33;CL:0000031!6.26e-14!33;CL:0000404!6.26e-14!33;CL:0000393!1.45e-10!39;CL:0000211!1.45e-10!39;CL:0002319!7.00e-09!43;CL:0000221!1.63e-08!44;CL:0000133!1.63e-08!44;CL:0002609!4.78e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.61e-29,23;CL:0000337,5.61e-29,23;CL:0000540,6.40e-19,33;CL:0000047,6.40e-19,33;CL:0000031,6.40e-19,33;CL:0000404,6.40e-19,33;CL:0000393,2.28e-15,39;CL:0000211,2.28e-15,39;CL:0002319,1.48e-13,43;CL:0002609,3.03e-13,6;CL:0000221,3.73e-13,44;CL:0000133,3.73e-13,44;CL:0002610,2.27e-08,3;CL:0002612,1.18e-07,3;CL:0002613,3.05e-07,3;CL:0002608,5.09e-07,3;CL:0002321,8.49e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.40e-30!50;UBERON:0006238!1.40e-30!50;UBERON:0002616!9.84e-30!49;UBERON:0001017!2.65e-29!73;UBERON:0005743!2.65e-29!73;UBERON:0002346!1.27e-28!71;UBERON:0003075!1.27e-28!71;UBERON:0007284!1.27e-28!71;UBERON:0001049!1.39e-28!52;UBERON:0005068!1.39e-28!52;UBERON:0006241!1.39e-28!52;UBERON:0007135!1.39e-28!52;UBERON:0000073!4.79e-28!75;UBERON:0001016!4.79e-28!75;UBERON:0000033!1.14e-27!63;UBERON:0002020!1.81e-26!34;UBERON:0002791!9.74e-26!29;UBERON:0003528!9.74e-26!29;UBERON:0001893!9.74e-26!29;UBERON:0003080!5.95e-25!40;UBERON:0003056!7.56e-25!49;UBERON:0002780!4.99e-24!39;UBERON:0001890!4.99e-24!39;UBERON:0006240!4.99e-24!39;UBERON:0004121!1.70e-23!102;UBERON:0000924!1.70e-23!102;UBERON:0006601!1.70e-23!102;UBERON:0000956!2.89e-18!21;UBERON:0001869!2.89e-18!21;UBERON:0000203!2.89e-18!21;UBERON:0007811!4.64e-16!86;UBERON:0002619!2.42e-14!17;UBERON:0000153!2.00e-13!94;UBERON:0002021!8.69e-13!10;UBERON:0000411!8.69e-13!10;UBERON:0001950!8.69e-13!10;UBERON:0002420!1.55e-08!8;UBERON:0007245!1.55e-08!8;UBERON:0010009!1.55e-08!8;UBERON:0010011!1.55e-08!8;UBERON:0000454!1.55e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.35e-47,34;UBERON:0003528,1.93e-44,29;UBERON:0002791,1.93e-44,29;UBERON:0001893,1.93e-44,29;UBERON:0000073,2.03e-43,54;UBERON:0003080,3.51e-39,40;UBERON:0002780,2.45e-37,39;UBERON:0001890,2.45e-37,39;UBERON:0006240,2.45e-37,39;UBERON:0001049,2.53e-36,52;UBERON:0005068,2.53e-36,52;UBERON:0006241,2.53e-36,52;UBERON:0007135,2.53e-36,52;UBERON:0000956,3.22e-35,21;UBERON:0001869,3.22e-35,21;UBERON:0000203,3.22e-35,21;UBERON:0001017,1.48e-34,73;UBERON:0001016,1.90e-33,75;UBERON:0002616,2.91e-33,46;UBERON:0003056,3.16e-33,49;UBERON:0000955,2.01e-32,47;UBERON:0006238,2.01e-32,47;UBERON:0002346,2.66e-30,64;UBERON:0003075,2.66e-30,64;UBERON:0007284,2.66e-30,64;UBERON:0002619,6.83e-27,17;UBERON:0004121,1.52e-26,95;UBERON:0000924,1.52e-26,95;UBERON:0006601,1.52e-26,95;UBERON:0010371,9.85e-26,73;UBERON:0002021,1.83e-25,10;UBERON:0000411,1.83e-25,10;UBERON:0001950,1.83e-25,10;UBERON:0010314,5.13e-19,92;UBERON:0000025,6.09e-13,114;UBERON:0004111,1.18e-11,122;UBERON:0000369,1.65e-11,5;UBERON:0002435,1.65e-11,5;UBERON:0000204,1.65e-11,5;UBERON:0010082,1.65e-11,5;UBERON:0002420,3.67e-10,8;UBERON:0007245,3.67e-10,8;UBERON:0010009,3.67e-10,8;UBERON:0010011,3.67e-10,8;UBERON:0000454,3.67e-10,8;UBERON:0011216,1.84e-08,194;UBERON:0004684,2.27e-08,3;UBERON:0002275,2.27e-08,3;UBERON:0002257,1.18e-07,3;UBERON:0000483,7.72e-07,174 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,2.48855069540346,2.70011876663381,2.10324961351382,0,0,1.10241719293459,1.15014565221884,1.83843757322004,2.20231761998777,3.95830748064082,4.45458946443106,1.05509030184155,2.37867873366265,1.56274011167028,0.558365998002762,0.56276261003168,3.20876320331301,1.76777151284201,2.84743361598206,1.67759501242771,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.461230994512117,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,1.3481157546434,2.28750301409313,3.01570445070875,1.39059456153821,3.06858548796397,1.24672826735736,2.10913641988085,0,0,0,0,0,0,0.180062129805349,1.05493372485001,0.272145996605311,0.2562274405697,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.32199371992995,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.390438744296638,0.861693590931196,0.238968797952552,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0.713475270408282,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,8.74617949363636,12.0308057822273,7.56154002312225,2.74033007908257,3.7769694869485,2.70009000092722,7.20513925158753,3.62513927187364,4.65984280576638,0,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.618105171716683,0.64183841918363,0,0.50695859978048,0,0.37456602987953,0.256100609619477,0.114870937911227,0,0.347652977834566,0.578727661391115,0.412085900803307,0.441596760403192,1.37147700954166,0.887379030796687,0.476872379894642,0.581385666529314,0.0941093804153306,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr12:30468710..30468730,+ | |||
}} |
Revision as of 22:41, 12 September 2013
Short description: | p@chr12:30468710..30468730, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:30468710..30468730, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.61e-29 | 23 |
neuroblast (sensu Vertebrata) | 5.61e-29 | 23 |
neuron | 6.40e-19 | 33 |
neuronal stem cell | 6.40e-19 | 33 |
neuroblast | 6.40e-19 | 33 |
electrically signaling cell | 6.40e-19 | 33 |
electrically responsive cell | 2.28e-15 | 39 |
electrically active cell | 2.28e-15 | 39 |
neural cell | 1.48e-13 | 43 |
neuron of cerebral cortex | 3.03e-13 | 6 |
ectodermal cell | 3.73e-13 | 44 |
neurectodermal cell | 3.73e-13 | 44 |
raphe nuclei neuron | 2.27e-08 | 3 |
neuron of the ventral spinal cord | 1.18e-07 | 3 |
striatum neuron | 3.05e-07 | 3 |
hippocampal neuron | 5.09e-07 | 3 |
embryonic cell | 8.49e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.