FFCP PHASE1:Mm9::chr12:114660412..114660440,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=372|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114660412..114660440,-|id=chr12:114660412..114660440,-|ontology_enrichment_celltype=CL:0000988!5.40e-10!32;CL:0002032!5.40e-10!32;CL:0000037!5.40e-10!32;CL:0000566!5.40e-10!32;CL:0000837!5.40e-10!32;CL:0000553!5.29e-09!6;CL:0000556!5.29e-09!6;CL:0002031!1.35e-08!25|ontology_enrichment_celltype_v019_2=CL:0000553,2.41e-32,6;CL:0000556,2.41e-32,6;CL:0000050,1.83e-21,9;CL:0002027,9.38e-17,3;CL:0002006,9.38e-17,3;CL:0002024,9.38e-17,3;CL:0002031,4.53e-16,25;CL:0000988,3.99e-15,32;CL:0002032,3.99e-15,32;CL:0000037,3.99e-15,32;CL:0000837,3.99e-15,32;CL:0000839,9.51e-15,13;CL:0000049,3.21e-13,19;CL:0000763,6.61e-12,16;CL:0002320,4.11e-10,46;CL:0000134,4.11e-10,46;CL:0000219,2.07e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.54e-14!48;UBERON:0002390!1.30e-11!45;UBERON:0003061!1.30e-11!45;UBERON:0002405!3.38e-10!70;UBERON:0004177!1.70e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.13e-16,3;UBERON:0002193,2.31e-14,48;UBERON:0002405,2.31e-14,48;UBERON:0002371,6.61e-12,16;UBERON:0001962,3.86e-11,2;UBERON:0001961,3.86e-11,2;UBERON:0001744,3.86e-11,2;UBERON:0002384,4.11e-10,46;UBERON:0002390,1.49e-08,45;UBERON:0003061,1.49e-08,45;UBERON:0001474,1.55e-08,22;UBERON:0004765,1.55e-08,22;UBERON:0001434,1.55e-08,22;UBERON:0002106,1.94e-08,6;UBERON:0004457,1.94e-08,6;UBERON:0000042,1.94e-08,6;UBERON:0004854,1.94e-08,6;UBERON:0009034,1.94e-08,6;UBERON:0002095,1.94e-08,6;UBERON:0004782,1.94e-08,6;UBERON:0003281,1.94e-08,6;UBERON:0009664,1.94e-08,6;UBERON:0002296,1.94e-08,6;UBERON:0005602,1.94e-08,6;UBERON:0001179,1.94e-08,6;UBERON:0006293,1.94e-08,6;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0.513602189793617,0.524522414513984,7.66152452176024,10.3262386368811,5.59649502502517,13.7226041930833,16.0423887318714,8.06340338416257,0.0850432901510698,0.794327609607082,1.04479915655574,4.47978783821539,2.2940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,5.5368259999053,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,9.83963957859253,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0.969750506270444,0,0,0,0,0.479260498023681,1.19980546198682,0.381210681219194,0,0,0,0,0,0.41557608911912,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,2.65490276679926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0.291480836629851,0.370850604021019,14.8657666294132,0,0.370389054739423,0.565105371014073,2.32380187125743,2.51655990527175,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0,0,0,0,0.360586348559907,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.877120926657772,0.481059208201647,0.467507608726276,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr12:114660412..114660440,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=372 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114660412..114660440,- | |||
|id=chr12:114660412..114660440,- | |||
|ontology_enrichment_celltype=CL:0000988!5.40e-10!32;CL:0002032!5.40e-10!32;CL:0000037!5.40e-10!32;CL:0000566!5.40e-10!32;CL:0000837!5.40e-10!32;CL:0000553!5.29e-09!6;CL:0000556!5.29e-09!6;CL:0002031!1.35e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.41e-32,6;CL:0000556,2.41e-32,6;CL:0000050,1.83e-21,9;CL:0002027,9.38e-17,3;CL:0002006,9.38e-17,3;CL:0002024,9.38e-17,3;CL:0002031,4.53e-16,25;CL:0000988,3.99e-15,32;CL:0002032,3.99e-15,32;CL:0000037,3.99e-15,32;CL:0000837,3.99e-15,32;CL:0000839,9.51e-15,13;CL:0000049,3.21e-13,19;CL:0000763,6.61e-12,16;CL:0002320,4.11e-10,46;CL:0000134,4.11e-10,46;CL:0000219,2.07e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.54e-14!48;UBERON:0002390!1.30e-11!45;UBERON:0003061!1.30e-11!45;UBERON:0002405!3.38e-10!70;UBERON:0004177!1.70e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.13e-16,3;UBERON:0002193,2.31e-14,48;UBERON:0002405,2.31e-14,48;UBERON:0002371,6.61e-12,16;UBERON:0001962,3.86e-11,2;UBERON:0001961,3.86e-11,2;UBERON:0001744,3.86e-11,2;UBERON:0002384,4.11e-10,46;UBERON:0002390,1.49e-08,45;UBERON:0003061,1.49e-08,45;UBERON:0001474,1.55e-08,22;UBERON:0004765,1.55e-08,22;UBERON:0001434,1.55e-08,22;UBERON:0002106,1.94e-08,6;UBERON:0004457,1.94e-08,6;UBERON:0000042,1.94e-08,6;UBERON:0004854,1.94e-08,6;UBERON:0009034,1.94e-08,6;UBERON:0002095,1.94e-08,6;UBERON:0004782,1.94e-08,6;UBERON:0003281,1.94e-08,6;UBERON:0009664,1.94e-08,6;UBERON:0002296,1.94e-08,6;UBERON:0005602,1.94e-08,6;UBERON:0001179,1.94e-08,6;UBERON:0006293,1.94e-08,6;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0.513602189793617,0.524522414513984,7.66152452176024,10.3262386368811,5.59649502502517,13.7226041930833,16.0423887318714,8.06340338416257,0.0850432901510698,0.794327609607082,1.04479915655574,4.47978783821539,2.2940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,5.5368259999053,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,9.83963957859253,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0.969750506270444,0,0,0,0,0.479260498023681,1.19980546198682,0.381210681219194,0,0,0,0,0,0.41557608911912,0,0,0.248813941220186,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,2.65490276679926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0.291480836629851,0.370850604021019,14.8657666294132,0,0.370389054739423,0.565105371014073,2.32380187125743,2.51655990527175,0.509935289981566,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,0,0,0,0,0.360586348559907,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.877120926657772,0.481059208201647,0.467507608726276,0,0,0,0,0.386379188064381,0,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr12:114660412..114660440,- | |||
}} |
Revision as of 22:26, 12 September 2013
Short description: | p@chr12:114660412..114660440, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114660412..114660440, - |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.41e-32 | 6 |
megakaryocyte | 2.41e-32 | 6 |
megakaryocyte-erythroid progenitor cell | 1.83e-21 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 9.38e-17 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 9.38e-17 | 3 |
Kit-positive megakaryocyte progenitor cell | 9.38e-17 | 3 |
hematopoietic lineage restricted progenitor cell | 4.53e-16 | 25 |
hematopoietic cell | 3.99e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.99e-15 | 32 |
hematopoietic stem cell | 3.99e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.99e-15 | 32 |
myeloid lineage restricted progenitor cell | 9.51e-15 | 13 |
common myeloid progenitor | 3.21e-13 | 19 |
myeloid cell | 6.61e-12 | 16 |
connective tissue cell | 4.11e-10 | 46 |
mesenchymal cell | 4.11e-10 | 46 |
motile cell | 2.07e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.13e-16 | 3 |
hemolymphoid system | 2.31e-14 | 48 |
immune system | 2.31e-14 | 48 |
bone marrow | 6.61e-12 | 16 |
gut-associated lymphoid tissue | 3.86e-11 | 2 |
mucosa-associated lymphoid tissue | 3.86e-11 | 2 |
lymphoid tissue | 3.86e-11 | 2 |
connective tissue | 4.11e-10 | 46 |
hematopoietic system | 1.49e-08 | 45 |
blood island | 1.49e-08 | 45 |
bone element | 1.55e-08 | 22 |
skeletal element | 1.55e-08 | 22 |
skeletal system | 1.55e-08 | 22 |
spleen | 1.94e-08 | 6 |
cavity lining | 1.94e-08 | 6 |
serous membrane | 1.94e-08 | 6 |
gastrointestinal system mesentery | 1.94e-08 | 6 |
stomach region | 1.94e-08 | 6 |
mesentery | 1.94e-08 | 6 |
gastrointestinal system serosa | 1.94e-08 | 6 |
mesentery of stomach | 1.94e-08 | 6 |
gut mesentery | 1.94e-08 | 6 |
dorsal mesentery | 1.94e-08 | 6 |
dorsal mesogastrium | 1.94e-08 | 6 |
peritoneal cavity | 1.94e-08 | 6 |
spleen primordium | 1.94e-08 | 6 |
lymph node | 9.48e-07 | 1 |
axillary lymph node | 9.48e-07 | 1 |
peripheral lymph node | 9.48e-07 | 1 |
shoulder | 9.48e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.