FFCP PHASE1:Mm9::chr12:112398427..112398438,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112398427..112398438,+|id=chr12:112398427..112398438,+|ontology_enrichment_celltype=CL:0002031!8.99e-14!25;CL:0000838!1.48e-13!12;CL:0000542!2.07e-12!13;CL:0000051!2.07e-12!13;CL:0000084!2.99e-11!11;CL:0000827!2.99e-11!11;CL:0000791!1.77e-10!9;CL:0000789!1.77e-10!9;CL:0002420!1.77e-10!9;CL:0002419!1.77e-10!9;CL:0000790!1.77e-10!9;CL:0000988!3.35e-10!32;CL:0002032!3.35e-10!32;CL:0000037!3.35e-10!32;CL:0000566!3.35e-10!32;CL:0000837!3.35e-10!32;CL:0000738!3.55e-09!17;CL:0002087!3.55e-09!17;CL:0000624!1.86e-08!8;CL:0000553!5.79e-08!6;CL:0000556!5.79e-08!6|ontology_enrichment_celltype_v019_2=CL:0000945,6.50e-14,1;CL:0000236,6.50e-14,1;CL:0000826,6.50e-14,1;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0000553,3.81e-09,6;CL:0000556,3.81e-09,6;CL:0002031,2.25e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.93e-18,3;DOID:4045,8.93e-18,3;DOID:0050686,2.15e-09,6|ontology_enrichment_uberon=UBERON:0002193!8.11e-08!48;UBERON:0002390!2.81e-07!45;UBERON:0003061!2.81e-07!45|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,0.281577444303333,0,0,0.239316476986009,0,0.524522414513984,0,0.607425802169478,0,0.946386496074713,1.50825876966313,2.97072756258621,0,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0,3.14114246384279,8.2352408324342,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,3.18786951509699,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr12:112398427..112398438,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:112398427..112398438,+ | |||
|id=chr12:112398427..112398438,+ | |||
|ontology_enrichment_celltype=CL:0002031!8.99e-14!25;CL:0000838!1.48e-13!12;CL:0000542!2.07e-12!13;CL:0000051!2.07e-12!13;CL:0000084!2.99e-11!11;CL:0000827!2.99e-11!11;CL:0000791!1.77e-10!9;CL:0000789!1.77e-10!9;CL:0002420!1.77e-10!9;CL:0002419!1.77e-10!9;CL:0000790!1.77e-10!9;CL:0000988!3.35e-10!32;CL:0002032!3.35e-10!32;CL:0000037!3.35e-10!32;CL:0000566!3.35e-10!32;CL:0000837!3.35e-10!32;CL:0000738!3.55e-09!17;CL:0002087!3.55e-09!17;CL:0000624!1.86e-08!8;CL:0000553!5.79e-08!6;CL:0000556!5.79e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.50e-14,1;CL:0000236,6.50e-14,1;CL:0000826,6.50e-14,1;CL:0000815,1.55e-13,1;CL:0000792,1.55e-13,1;CL:0000553,3.81e-09,6;CL:0000556,3.81e-09,6;CL:0002031,2.25e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.93e-18,3;DOID:4045,8.93e-18,3;DOID:0050686,2.15e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.11e-08!48;UBERON:0002390!2.81e-07!45;UBERON:0003061!2.81e-07!45 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,0.281577444303333,0,0,0.239316476986009,0,0.524522414513984,0,0.607425802169478,0,0.946386496074713,1.50825876966313,2.97072756258621,0,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0,3.14114246384279,8.2352408324342,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,3.18786951509699,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr12:112398427..112398438,+ | |||
}} |
Revision as of 22:18, 12 September 2013
Short description: | p@chr12:112398427..112398438, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112398427..112398438, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.50e-14 | 1 |
B cell | 6.50e-14 | 1 |
pro-B cell | 6.50e-14 | 1 |
regulatory T cell | 1.55e-13 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.55e-13 | 1 |
megakaryocyte progenitor cell | 3.81e-09 | 6 |
megakaryocyte | 3.81e-09 | 6 |
hematopoietic lineage restricted progenitor cell | 2.25e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.93e-18 | 3 |
muscle cancer | 8.93e-18 | 3 |
organ system cancer | 2.15e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.