FFCP PHASE1:Mm9::chr12:110798500..110798511,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=186|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110798500..110798511,+|id=chr12:110798500..110798511,+|ontology_enrichment_celltype=CL:0000117!2.94e-08!23;CL:0000337!2.94e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-09,23;CL:0000337,4.03e-09,23;CL:0002610,2.38e-08,3;CL:0002614,5.60e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.46e-20!71;UBERON:0003075!2.46e-20!71;UBERON:0007284!2.46e-20!71;UBERON:0001049!1.04e-19!52;UBERON:0005068!1.04e-19!52;UBERON:0006241!1.04e-19!52;UBERON:0007135!1.04e-19!52;UBERON:0000955!7.43e-19!50;UBERON:0006238!7.43e-19!50;UBERON:0002616!3.30e-18!49;UBERON:0001017!1.99e-17!73;UBERON:0005743!1.99e-17!73;UBERON:0002020!2.15e-17!34;UBERON:0000073!1.76e-16!75;UBERON:0001016!1.76e-16!75;UBERON:0000033!2.76e-16!63;UBERON:0003080!2.59e-14!40;UBERON:0002791!3.14e-14!29;UBERON:0003528!3.14e-14!29;UBERON:0001893!3.14e-14!29;UBERON:0003056!5.50e-14!49;UBERON:0004121!1.14e-13!102;UBERON:0000924!1.14e-13!102;UBERON:0006601!1.14e-13!102;UBERON:0002780!1.44e-13!39;UBERON:0001890!1.44e-13!39;UBERON:0006240!1.44e-13!39;UBERON:0002021!6.15e-11!10;UBERON:0000411!6.15e-11!10;UBERON:0001950!6.15e-11!10;UBERON:0002619!2.58e-09!17;UBERON:0000956!6.90e-09!21;UBERON:0001869!6.90e-09!21;UBERON:0000203!6.90e-09!21;UBERON:0007811!8.24e-09!86;UBERON:0000153!2.22e-08!94;UBERON:0000025!1.43e-07!114;UBERON:0002420!6.34e-07!8;UBERON:0007245!6.34e-07!8;UBERON:0010009!6.34e-07!8;UBERON:0010011!6.34e-07!8;UBERON:0000454!6.34e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.27e-37,54;UBERON:0001049,3.96e-33,52;UBERON:0005068,3.96e-33,52;UBERON:0006241,3.96e-33,52;UBERON:0007135,3.96e-33,52;UBERON:0001017,6.61e-30,73;UBERON:0002616,1.10e-29,46;UBERON:0001016,6.18e-29,75;UBERON:0000955,6.23e-29,47;UBERON:0006238,6.23e-29,47;UBERON:0002346,8.79e-28,64;UBERON:0003075,8.79e-28,64;UBERON:0007284,8.79e-28,64;UBERON:0002020,5.19e-27,34;UBERON:0003080,7.89e-27,40;UBERON:0002021,9.59e-27,10;UBERON:0000411,9.59e-27,10;UBERON:0001950,9.59e-27,10;UBERON:0003528,7.23e-26,29;UBERON:0002791,7.23e-26,29;UBERON:0001893,7.23e-26,29;UBERON:0002780,5.17e-25,39;UBERON:0001890,5.17e-25,39;UBERON:0006240,5.17e-25,39;UBERON:0010371,1.37e-23,73;UBERON:0004121,4.91e-23,95;UBERON:0000924,4.91e-23,95;UBERON:0006601,4.91e-23,95;UBERON:0003056,5.59e-23,49;UBERON:0002619,1.01e-17,17;UBERON:0010314,2.00e-17,92;UBERON:0000956,1.93e-16,21;UBERON:0001869,1.93e-16,21;UBERON:0000203,1.93e-16,21;UBERON:0000025,4.71e-13,114;UBERON:0004111,8.79e-12,122;UBERON:0002420,9.22e-11,8;UBERON:0007245,9.22e-11,8;UBERON:0010009,9.22e-11,8;UBERON:0010011,9.22e-11,8;UBERON:0000454,9.22e-11,8;UBERON:0002950,4.14e-10,4;UBERON:0001891,4.14e-10,4;UBERON:0009616,4.14e-10,4;UBERON:0010286,4.14e-10,4;UBERON:0004684,2.38e-08,3;UBERON:0002275,2.38e-08,3;UBERON:0002038,5.60e-08,3;UBERON:0009663,5.60e-08,3;UBERON:0009661,5.60e-08,3;UBERON:0000125,5.60e-08,3;UBERON:0002308,5.60e-08,3;UBERON:0011216,5.96e-08,194;UBERON:0000483,4.61e-07,174;UBERON:0000119,6.57e-07,176;UBERON:0003076,9.70e-07,12;UBERON:0003057,9.70e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,2.20231761998777,2.93680877595932,3.68655679814984,0.131886287730194,0.548925861614458,2.08365348222704,1.67509799400829,1.12552522006336,3.81995619442025,5.30331453852602,2.27794689278565,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0.461230994512117,0.60289056221049,0.940709657085638,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,1.79748767285787,4.57500602818627,1.50785222535437,1.56441888173049,2.81287003063364,1.0389402227978,3.89379031362618,0.101839363850316,0,0,0,0.130120442962704,0,0,0.452114453507145,0.340182495756639,0.12811372028485,0,1.03481348295606,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,1.26173969138476,0.617427674275707,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,11.5014565221884,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,1.60550589987792,1.05490517932983,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0.565815239267694,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0,0,0,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.2160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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=186 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:110798500..110798511,+ | |||
|id=chr12:110798500..110798511,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.94e-08!23;CL:0000337!2.94e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-09,23;CL:0000337,4.03e-09,23;CL:0002610,2.38e-08,3;CL:0002614,5.60e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.46e-20!71;UBERON:0003075!2.46e-20!71;UBERON:0007284!2.46e-20!71;UBERON:0001049!1.04e-19!52;UBERON:0005068!1.04e-19!52;UBERON:0006241!1.04e-19!52;UBERON:0007135!1.04e-19!52;UBERON:0000955!7.43e-19!50;UBERON:0006238!7.43e-19!50;UBERON:0002616!3.30e-18!49;UBERON:0001017!1.99e-17!73;UBERON:0005743!1.99e-17!73;UBERON:0002020!2.15e-17!34;UBERON:0000073!1.76e-16!75;UBERON:0001016!1.76e-16!75;UBERON:0000033!2.76e-16!63;UBERON:0003080!2.59e-14!40;UBERON:0002791!3.14e-14!29;UBERON:0003528!3.14e-14!29;UBERON:0001893!3.14e-14!29;UBERON:0003056!5.50e-14!49;UBERON:0004121!1.14e-13!102;UBERON:0000924!1.14e-13!102;UBERON:0006601!1.14e-13!102;UBERON:0002780!1.44e-13!39;UBERON:0001890!1.44e-13!39;UBERON:0006240!1.44e-13!39;UBERON:0002021!6.15e-11!10;UBERON:0000411!6.15e-11!10;UBERON:0001950!6.15e-11!10;UBERON:0002619!2.58e-09!17;UBERON:0000956!6.90e-09!21;UBERON:0001869!6.90e-09!21;UBERON:0000203!6.90e-09!21;UBERON:0007811!8.24e-09!86;UBERON:0000153!2.22e-08!94;UBERON:0000025!1.43e-07!114;UBERON:0002420!6.34e-07!8;UBERON:0007245!6.34e-07!8;UBERON:0010009!6.34e-07!8;UBERON:0010011!6.34e-07!8;UBERON:0000454!6.34e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.27e-37,54;UBERON:0001049,3.96e-33,52;UBERON:0005068,3.96e-33,52;UBERON:0006241,3.96e-33,52;UBERON:0007135,3.96e-33,52;UBERON:0001017,6.61e-30,73;UBERON:0002616,1.10e-29,46;UBERON:0001016,6.18e-29,75;UBERON:0000955,6.23e-29,47;UBERON:0006238,6.23e-29,47;UBERON:0002346,8.79e-28,64;UBERON:0003075,8.79e-28,64;UBERON:0007284,8.79e-28,64;UBERON:0002020,5.19e-27,34;UBERON:0003080,7.89e-27,40;UBERON:0002021,9.59e-27,10;UBERON:0000411,9.59e-27,10;UBERON:0001950,9.59e-27,10;UBERON:0003528,7.23e-26,29;UBERON:0002791,7.23e-26,29;UBERON:0001893,7.23e-26,29;UBERON:0002780,5.17e-25,39;UBERON:0001890,5.17e-25,39;UBERON:0006240,5.17e-25,39;UBERON:0010371,1.37e-23,73;UBERON:0004121,4.91e-23,95;UBERON:0000924,4.91e-23,95;UBERON:0006601,4.91e-23,95;UBERON:0003056,5.59e-23,49;UBERON:0002619,1.01e-17,17;UBERON:0010314,2.00e-17,92;UBERON:0000956,1.93e-16,21;UBERON:0001869,1.93e-16,21;UBERON:0000203,1.93e-16,21;UBERON:0000025,4.71e-13,114;UBERON:0004111,8.79e-12,122;UBERON:0002420,9.22e-11,8;UBERON:0007245,9.22e-11,8;UBERON:0010009,9.22e-11,8;UBERON:0010011,9.22e-11,8;UBERON:0000454,9.22e-11,8;UBERON:0002950,4.14e-10,4;UBERON:0001891,4.14e-10,4;UBERON:0009616,4.14e-10,4;UBERON:0010286,4.14e-10,4;UBERON:0004684,2.38e-08,3;UBERON:0002275,2.38e-08,3;UBERON:0002038,5.60e-08,3;UBERON:0009663,5.60e-08,3;UBERON:0009661,5.60e-08,3;UBERON:0000125,5.60e-08,3;UBERON:0002308,5.60e-08,3;UBERON:0011216,5.96e-08,194;UBERON:0000483,4.61e-07,174;UBERON:0000119,6.57e-07,176;UBERON:0003076,9.70e-07,12;UBERON:0003057,9.70e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,2.20231761998777,2.93680877595932,3.68655679814984,0.131886287730194,0.548925861614458,2.08365348222704,1.67509799400829,1.12552522006336,3.81995619442025,5.30331453852602,2.27794689278565,0.745597783301202,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0.461230994512117,0.60289056221049,0.940709657085638,0,0,0,0,0.161766849947409,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,1.79748767285787,4.57500602818627,1.50785222535437,1.56441888173049,2.81287003063364,1.0389402227978,3.89379031362618,0.101839363850316,0,0,0,0.130120442962704,0,0,0.452114453507145,0.340182495756639,0.12811372028485,0,1.03481348295606,0,0.189106080167819,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,1.26173969138476,0.617427674275707,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,11.5014565221884,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,1.60550589987792,1.05490517932983,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0.642642632843614,0,0,0.162886959353576,0,0,0.242780636154981,0,0.565815239267694,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0,0,0,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,6.44455331110048,6.87474616127276,6.53042092906013,4.7955776383945,3.0215755895588,4.05013500139084,6.30449684513909,7.70342095273148,10.8729665467882,0,0.399024873401031,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0.943131706930381,0.468207537349412,0.448176066834085,0.34461281373368,0.476293691283074,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.73171189149109,1.31534855718921,0,0.561142271657738,0.118635018124174,0.788035859004508,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0 | |||
|short_description=p@chr12:110798500..110798511,+ | |||
}} |
Revision as of 22:14, 12 September 2013
Short description: | p@chr12:110798500..110798511, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110798500..110798511, + |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.03e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-09 | 23 |
raphe nuclei neuron | 2.38e-08 | 3 |
neuron of the substantia nigra | 5.60e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.