FFCP PHASE1:Hg19::chr3:151034583..151034678,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=53836|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4538|TSSclassifier=S|UniProt=Q9BY21|association_with_transcript=0bp_to_NM_023915,uc003eyt.2_5end|description=CAGE_peak_1_at_GPR87_5end|id=chr3:151034583..151034678,-|ontology_enrichment_celltype=CL:0000066!1.59e-39!254;CL:0002076!1.12e-19!43;CL:0000223!3.11e-13!59;CL:0000076!2.73e-12!62;CL:0002368!2.97e-10!13;CL:0002251!2.31e-09!21;CL:0002159!4.96e-07!13;CL:0000077!8.12e-07!19|ontology_enrichment_celltype_v019=CL:0002076;9.60e-19;42!CL:0002251;3.30e-15;20!CL:0002368;1.16e-14;13!CL:0002159;1.99e-09;14!CL:0002202;2.44e-09;9!CL:0002632;2.44e-09;9!CL:0000154;1.18e-08;6!CL:0000622;4.09e-08;5!CL:0000150;1.81e-07;9!CL:0000076;4.83e-07;63|ontology_enrichment_celltype_v019_2=CL:0000066,1.54e-44,253;CL:0002076,1.07e-25,42;CL:0000223,3.53e-18,58;CL:0002251,3.34e-15,20;CL:0002368,1.14e-14,13;CL:0000076,7.59e-14,63;CL:0002159,1.97e-09,14;CL:0002202,2.44e-09,9;CL:0002632,2.44e-09,9;CL:0000154,1.14e-08,6;CL:0000622,4.13e-08,5;CL:0000150,1.88e-07,9|ontology_enrichment_development_v019=CL:0000223;6.71e-10;58!UBERON:0008947;2.59e-07;29|ontology_enrichment_disease=DOID:305!4.53e-17!106;DOID:1749!1.48e-13!14;DOID:0050687!1.01e-09!143|ontology_enrichment_disease_v019=DOID:1749;3.35e-19;14|ontology_enrichment_disease_v019_2=DOID:1749,3.17e-19,14;DOID:305,1.22e-18,106;DOID:0050687,3.05e-11,143|ontology_enrichment_uberon=UBERON:0001004!3.75e-21!72;UBERON:0004119!5.21e-17!169;UBERON:0000925!5.21e-17!169;UBERON:0006595!5.21e-17!169;UBERON:0000065!1.78e-15!53;UBERON:0000161!3.05e-13!35;UBERON:0000072!2.14e-12!46;UBERON:0000464!3.37e-12!104;UBERON:0000077!6.96e-12!130;UBERON:0001007!4.84e-11!155;UBERON:0001555!4.84e-11!155;UBERON:0007026!4.84e-11!155;UBERON:0004921!1.95e-10!129;UBERON:0004185!1.95e-10!129;UBERON:0008947!3.15e-10!38;UBERON:0003258!3.15e-10!38;UBERON:0001008!6.07e-10!45;UBERON:0003064!7.64e-10!37;UBERON:0000166!8.59e-10!21;UBERON:0006554!1.68e-09!44;UBERON:0001041!5.40e-09!98;UBERON:0001557!9.56e-09!19;UBERON:0000466!1.34e-08!126;UBERON:0005156!1.52e-08!59;UBERON:0000990!1.52e-08!59;UBERON:0003104!1.66e-08!238;UBERON:0009142!1.66e-08!238;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0001737!2.23e-07!9;UBERON:0005157!2.50e-07!51;UBERON:0005181!3.37e-07!35;UBERON:0005153!3.76e-07!37;UBERON:0000165!5.50e-07!28;UBERON:0000930!5.50e-07!28;UBERON:0005178!7.50e-07!34;UBERON:0002224!7.50e-07!34;UBERON:0002553!9.50e-07!70|ontology_enrichment_uberon_v019=UBERON:0000065;2.06e-11;44!UBERON:0001004;2.96e-11;65!UBERON:0000072;6.31e-11;37!UBERON:0000161;2.38e-10;19!UBERON:0000166;2.38e-10;19!UBERON:0001737;3.93e-10;9!UBERON:0001557;3.93e-10;9!UBERON:0000165;1.58e-09;28!UBERON:0000344;2.70e-08;20!UBERON:0000365;6.98e-08;5!UBERON:0005631;1.09e-07;10!UBERON:0000158;1.09e-07;10!UBERON:0007196;2.36e-07;15!UBERON:0001558;2.36e-07;15!UBERON:0000486;2.80e-07;12!UBERON:0005911;4.86e-07;36!UBERON:0003343;8.73e-07;4!UBERON:0004785;8.73e-07;4!UBERON:0003729;9.48e-07;13!UBERON:0004807;9.52e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.95e-22,74;UBERON:0004119,2.58e-21,160;UBERON:0000925,2.58e-21,160;UBERON:0006595,2.58e-21,160;UBERON:0000065,7.88e-17,54;UBERON:0000161,1.95e-14,36;UBERON:0000072,2.33e-14,47;UBERON:0001007,4.00e-14,145;UBERON:0001555,4.00e-14,145;UBERON:0007026,4.00e-14,145;UBERON:0004921,2.62e-12,118;UBERON:0008947,2.84e-12,38;UBERON:0003258,2.84e-12,38;UBERON:0001041,7.99e-12,87;UBERON:0000166,1.65e-11,22;UBERON:0005631,5.66e-11,14;UBERON:0000158,5.66e-11,14;UBERON:0001557,3.19e-10,19;UBERON:0001737,3.93e-10,9;UBERON:0000165,4.73e-09,29;UBERON:0000930,4.73e-09,29;UBERON:0003102,1.62e-08,99;UBERON:0001008,1.74e-08,48;UBERON:0003124,2.40e-08,7;UBERON:0000344,2.69e-08,20;UBERON:0006554,5.84e-08,47;UBERON:0000365,6.88e-08,5;UBERON:0007196,2.30e-07,15;UBERON:0001558,2.30e-07,15;UBERON:0000153,2.36e-07,62;UBERON:0007811,2.36e-07,62;UBERON:0000033,2.50e-07,56;UBERON:0003343,8.31e-07,4;UBERON:0004785,8.31e-07,4;UBERON:0003729,9.23e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,4.42321085702716,2.09340350391728,8.73765488520689,4.22027165165526,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,30.3409004078046,27.4097386088208,40.3031871081799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0.640456598628376,0.650296737799391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0.087834785693126,0.196468613246569,9.4716774956061,18.5392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,19.624232346414,0,0,0,0,0,2.24271040056923,0,7.64669400093196,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,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827210363,0.488965776731466,7.73102738799903,3.32878387092756,0.402547587182052,0|short_description=p1@GPR87}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=53836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4538 | |||
|TSSclassifier=S | |||
|UniProt=Q9BY21 | |||
|association_with_transcript=0bp_to_NM_023915,uc003eyt.2_5end | |||
|description=CAGE_peak_1_at_GPR87_5end | |||
|id=chr3:151034583..151034678,- | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-39!254;CL:0002076!1.12e-19!43;CL:0000223!3.11e-13!59;CL:0000076!2.73e-12!62;CL:0002368!2.97e-10!13;CL:0002251!2.31e-09!21;CL:0002159!4.96e-07!13;CL:0000077!8.12e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.60e-19;42!CL:0002251;3.30e-15;20!CL:0002368;1.16e-14;13!CL:0002159;1.99e-09;14!CL:0002202;2.44e-09;9!CL:0002632;2.44e-09;9!CL:0000154;1.18e-08;6!CL:0000622;4.09e-08;5!CL:0000150;1.81e-07;9!CL:0000076;4.83e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.54e-44,253;CL:0002076,1.07e-25,42;CL:0000223,3.53e-18,58;CL:0002251,3.34e-15,20;CL:0002368,1.14e-14,13;CL:0000076,7.59e-14,63;CL:0002159,1.97e-09,14;CL:0002202,2.44e-09,9;CL:0002632,2.44e-09,9;CL:0000154,1.14e-08,6;CL:0000622,4.13e-08,5;CL:0000150,1.88e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.71e-10;58!UBERON:0008947;2.59e-07;29 | |||
|ontology_enrichment_disease=DOID:305!4.53e-17!106;DOID:1749!1.48e-13!14;DOID:0050687!1.01e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.35e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.17e-19,14;DOID:305,1.22e-18,106;DOID:0050687,3.05e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.75e-21!72;UBERON:0004119!5.21e-17!169;UBERON:0000925!5.21e-17!169;UBERON:0006595!5.21e-17!169;UBERON:0000065!1.78e-15!53;UBERON:0000161!3.05e-13!35;UBERON:0000072!2.14e-12!46;UBERON:0000464!3.37e-12!104;UBERON:0000077!6.96e-12!130;UBERON:0001007!4.84e-11!155;UBERON:0001555!4.84e-11!155;UBERON:0007026!4.84e-11!155;UBERON:0004921!1.95e-10!129;UBERON:0004185!1.95e-10!129;UBERON:0008947!3.15e-10!38;UBERON:0003258!3.15e-10!38;UBERON:0001008!6.07e-10!45;UBERON:0003064!7.64e-10!37;UBERON:0000166!8.59e-10!21;UBERON:0006554!1.68e-09!44;UBERON:0001041!5.40e-09!98;UBERON:0001557!9.56e-09!19;UBERON:0000466!1.34e-08!126;UBERON:0005156!1.52e-08!59;UBERON:0000990!1.52e-08!59;UBERON:0003104!1.66e-08!238;UBERON:0009142!1.66e-08!238;UBERON:0005631!1.32e-07!14;UBERON:0000158!1.32e-07!14;UBERON:0001737!2.23e-07!9;UBERON:0005157!2.50e-07!51;UBERON:0005181!3.37e-07!35;UBERON:0005153!3.76e-07!37;UBERON:0000165!5.50e-07!28;UBERON:0000930!5.50e-07!28;UBERON:0005178!7.50e-07!34;UBERON:0002224!7.50e-07!34;UBERON:0002553!9.50e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;2.06e-11;44!UBERON:0001004;2.96e-11;65!UBERON:0000072;6.31e-11;37!UBERON:0000161;2.38e-10;19!UBERON:0000166;2.38e-10;19!UBERON:0001737;3.93e-10;9!UBERON:0001557;3.93e-10;9!UBERON:0000165;1.58e-09;28!UBERON:0000344;2.70e-08;20!UBERON:0000365;6.98e-08;5!UBERON:0005631;1.09e-07;10!UBERON:0000158;1.09e-07;10!UBERON:0007196;2.36e-07;15!UBERON:0001558;2.36e-07;15!UBERON:0000486;2.80e-07;12!UBERON:0005911;4.86e-07;36!UBERON:0003343;8.73e-07;4!UBERON:0004785;8.73e-07;4!UBERON:0003729;9.48e-07;13!UBERON:0004807;9.52e-07;22 | |||
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| |||
|short_description=p1@GPR87 | |||
}} |
Revision as of 22:09, 12 September 2013
Short description: | p1@GPR87 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GPR87_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_023915, uc003eyt.2_5end |
EntrezGene: | GPR87 |
HGNC: | 4538 |
UniProt: | Q9BY21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.54e-44 | 253 |
endo-epithelial cell | 1.07e-25 | 42 |
endodermal cell | 3.53e-18 | 58 |
epithelial cell of alimentary canal | 3.34e-15 | 20 |
respiratory epithelial cell | 1.14e-14 | 13 |
squamous epithelial cell | 7.59e-14 | 63 |
general ecto-epithelial cell | 1.97e-09 | 14 |
epithelial cell of tracheobronchial tree | 2.44e-09 | 9 |
epithelial cell of lower respiratory tract | 2.44e-09 | 9 |
protein secreting cell | 1.14e-08 | 6 |
acinar cell | 4.13e-08 | 5 |
glandular epithelial cell | 1.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.95e-22 | 74 |
endoderm-derived structure | 2.58e-21 | 160 |
endoderm | 2.58e-21 | 160 |
presumptive endoderm | 2.58e-21 | 160 |
respiratory tract | 7.88e-17 | 54 |
orifice | 1.95e-14 | 36 |
segment of respiratory tract | 2.33e-14 | 47 |
digestive system | 4.00e-14 | 145 |
digestive tract | 4.00e-14 | 145 |
primitive gut | 4.00e-14 | 145 |
subdivision of digestive tract | 2.62e-12 | 118 |
respiratory primordium | 2.84e-12 | 38 |
endoderm of foregut | 2.84e-12 | 38 |
foregut | 7.99e-12 | 87 |
oral opening | 1.65e-11 | 22 |
extraembryonic membrane | 5.66e-11 | 14 |
membranous layer | 5.66e-11 | 14 |
upper respiratory tract | 3.19e-10 | 19 |
larynx | 3.93e-10 | 9 |
mouth | 4.73e-09 | 29 |
stomodeum | 4.73e-09 | 29 |
surface structure | 1.62e-08 | 99 |
renal system | 1.74e-08 | 48 |
chorion | 2.40e-08 | 7 |
mucosa | 2.69e-08 | 20 |
urinary system structure | 5.84e-08 | 47 |
urothelium | 6.88e-08 | 5 |
tracheobronchial tree | 2.30e-07 | 15 |
lower respiratory tract | 2.30e-07 | 15 |
anterior region of body | 2.36e-07 | 62 |
craniocervical region | 2.36e-07 | 62 |
head | 2.50e-07 | 56 |
mucosa of oral region | 8.31e-07 | 4 |
respiratory system mucosa | 8.31e-07 | 4 |
mouth mucosa | 9.23e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.17e-19 | 14 |
carcinoma | 1.22e-18 | 106 |
cell type cancer | 3.05e-11 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.