FFCP PHASE1:Mm9::chr11:93905638..93905643,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70834|HGNC=|UniProt=F8WH31|association_with_transcript=-35bp_to_ENSMUST00000024979_5end|description=CAGE_peak_14_at_Spag9_5end|id=chr11:93905638..93905643,+|ontology_enrichment_celltype=CL:0000117!5.40e-10!23;CL:0000337!5.40e-10!23;CL:0000540!3.02e-08!33;CL:0000047!3.02e-08!33;CL:0000031!3.02e-08!33;CL:0000404!3.02e-08!33;CL:0000221!7.62e-07!44;CL:0000133!7.62e-07!44|ontology_enrichment_celltype_v019_2=CL:0002610,8.79e-16,3;CL:0000117,4.48e-08,23;CL:0000337,4.48e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.87e-22!63;UBERON:0000955!9.71e-18!50;UBERON:0006238!9.71e-18!50;UBERON:0002616!5.55e-17!49;UBERON:0003056!8.93e-17!49;UBERON:0002346!1.24e-16!71;UBERON:0003075!1.24e-16!71;UBERON:0007284!1.24e-16!71;UBERON:0000073!1.44e-16!75;UBERON:0001016!1.44e-16!75;UBERON:0004121!3.87e-16!102;UBERON:0000924!3.87e-16!102;UBERON:0006601!3.87e-16!102;UBERON:0001017!1.52e-15!73;UBERON:0005743!1.52e-15!73;UBERON:0001049!7.71e-14!52;UBERON:0005068!7.71e-14!52;UBERON:0006241!7.71e-14!52;UBERON:0007135!7.71e-14!52;UBERON:0007811!1.11e-12!86;UBERON:0003080!1.09e-11!40;UBERON:0000153!3.47e-11!94;UBERON:0002791!3.50e-11!29;UBERON:0003528!3.50e-11!29;UBERON:0001893!3.50e-11!29;UBERON:0002780!4.98e-11!39;UBERON:0001890!4.98e-11!39;UBERON:0006240!4.98e-11!39;UBERON:0002020!8.53e-10!34;UBERON:0002420!8.61e-07!8;UBERON:0007245!8.61e-07!8;UBERON:0010009!8.61e-07!8;UBERON:0010011!8.61e-07!8;UBERON:0000454!8.61e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004684,8.79e-16,3;UBERON:0002275,8.79e-16,3;UBERON:0000073,2.17e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001896,6.68e-07,2;UBERON:0002298,6.68e-07,2;UBERON:0005290,6.68e-07,2;UBERON:0010096,6.68e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,0.210324961351382,0,0,1.10241719293459,0.383381884072945,0,1.10115880999389,0.638436690425939,1.53606533256243,0.263772575460388,0.274462930807229,1.04182674111352,0,0.56276261003168,0.916789486660861,0,0.427115042397309,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.347648640384553,0.511430914660661,1.0389402227978,0.486723789203273,0.101839363850316,0,0,0,0.260240885925407,0,0.720248519221397,0.90422890701429,1.2246569847239,0.896796041993948,0.749613796477831,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.720244376125241,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p14@Spag9}} | ||
|EntrezGene=70834 | |||
|HGNC= | |||
|UniProt=F8WH31 | |||
|association_with_transcript=-35bp_to_ENSMUST00000024979_5end | |||
|description=CAGE_peak_14_at_Spag9_5end | |||
|id=chr11:93905638..93905643,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.40e-10!23;CL:0000337!5.40e-10!23;CL:0000540!3.02e-08!33;CL:0000047!3.02e-08!33;CL:0000031!3.02e-08!33;CL:0000404!3.02e-08!33;CL:0000221!7.62e-07!44;CL:0000133!7.62e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.79e-16,3;CL:0000117,4.48e-08,23;CL:0000337,4.48e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.87e-22!63;UBERON:0000955!9.71e-18!50;UBERON:0006238!9.71e-18!50;UBERON:0002616!5.55e-17!49;UBERON:0003056!8.93e-17!49;UBERON:0002346!1.24e-16!71;UBERON:0003075!1.24e-16!71;UBERON:0007284!1.24e-16!71;UBERON:0000073!1.44e-16!75;UBERON:0001016!1.44e-16!75;UBERON:0004121!3.87e-16!102;UBERON:0000924!3.87e-16!102;UBERON:0006601!3.87e-16!102;UBERON:0001017!1.52e-15!73;UBERON:0005743!1.52e-15!73;UBERON:0001049!7.71e-14!52;UBERON:0005068!7.71e-14!52;UBERON:0006241!7.71e-14!52;UBERON:0007135!7.71e-14!52;UBERON:0007811!1.11e-12!86;UBERON:0003080!1.09e-11!40;UBERON:0000153!3.47e-11!94;UBERON:0002791!3.50e-11!29;UBERON:0003528!3.50e-11!29;UBERON:0001893!3.50e-11!29;UBERON:0002780!4.98e-11!39;UBERON:0001890!4.98e-11!39;UBERON:0006240!4.98e-11!39;UBERON:0002020!8.53e-10!34;UBERON:0002420!8.61e-07!8;UBERON:0007245!8.61e-07!8;UBERON:0010009!8.61e-07!8;UBERON:0010011!8.61e-07!8;UBERON:0000454!8.61e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,8.79e-16,3;UBERON:0002275,8.79e-16,3;UBERON:0000073,2.17e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95;UBERON:0001896,6.68e-07,2;UBERON:0002298,6.68e-07,2;UBERON:0005290,6.68e-07,2;UBERON:0010096,6.68e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.270011876663381,0.210324961351382,0,0,1.10241719293459,0.383381884072945,0,1.10115880999389,0.638436690425939,1.53606533256243,0.263772575460388,0.274462930807229,1.04182674111352,0,0.56276261003168,0.916789486660861,0,0.427115042397309,0,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0.347648640384553,0.511430914660661,1.0389402227978,0.486723789203273,0.101839363850316,0,0,0,0.260240885925407,0,0.720248519221397,0.90422890701429,1.2246569847239,0.896796041993948,0.749613796477831,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.720244376125241,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p14@Spag9 | |||
}} |
Revision as of 21:30, 12 September 2013
Short description: | p14@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Spag9_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENSMUST00000024979_5end |
EntrezGene: | Spag9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.79e-16 | 3 |
CNS neuron (sensu Vertebrata) | 4.48e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.48e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 8.79e-16 | 3 |
reticular formation | 8.79e-16 | 3 |
regional part of nervous system | 2.17e-07 | 54 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
medulla oblongata | 6.68e-07 | 2 |
brainstem | 6.68e-07 | 2 |
myelencephalon | 6.68e-07 | 2 |
future myelencephalon | 6.68e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.