FFCP PHASE1:Mm9::chr11:69478859..69478867,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69478859..69478867,-|id=chr11:69478859..69478867,-|ontology_enrichment_celltype=CL:0002194!8.12e-09!4;CL:0000766!8.12e-09!4;CL:0000576!8.12e-09!4;CL:0000235!8.12e-09!4;CL:0002009!8.12e-09!4;CL:0000040!8.12e-09!4;CL:0000559!8.12e-09!4;CL:0002092!3.83e-07!3;CL:0002540!3.83e-07!3|ontology_enrichment_celltype_v019_2=CL:0002194,1.12e-43,4;CL:0000766,1.12e-43,4;CL:0000234,1.12e-43,4;CL:0000576,1.12e-43,4;CL:0000235,1.12e-43,4;CL:0000864,1.12e-43,4;CL:0002009,1.12e-43,4;CL:0000040,1.12e-43,4;CL:0000559,1.12e-43,4;CL:0002092,6.12e-34,3;CL:0002540,6.12e-34,3;CL:0000473,3.04e-25,7;CL:0000557,3.04e-25,7;CL:0002476,5.10e-23,2;CL:0000878,2.32e-22,2;CL:0000129,2.32e-22,2;CL:0000839,7.69e-14,13;CL:0002320,1.00e-11,46;CL:0000134,1.00e-11,46;CL:0000763,2.49e-11,16;CL:0000738,1.09e-10,17;CL:0002087,1.09e-10,17;CL:0000219,5.55e-10,54;CL:0000049,1.32e-09,19;CL:0002031,2.18e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!6.47e-09!16;UBERON:0002204!7.88e-09!32;UBERON:0001474!4.08e-07!22;UBERON:0004765!4.08e-07!22;UBERON:0001434!4.08e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.54e-33,16;UBERON:0001474,1.90e-24,22;UBERON:0004765,1.90e-24,22;UBERON:0001434,1.90e-24,22;UBERON:0002204,7.62e-17,32;UBERON:0002390,5.49e-12,45;UBERON:0003061,5.49e-12,45;UBERON:0002384,1.00e-11,46;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.315462165358238,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0.659058548203415,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,19.7977937801908,52.4099172160496,19.8934432184908,7.78960287347852,5.76327457982332,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.289298117163023,21.1107797514981,8.70249094109935,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr11:69478859..69478867,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69478859..69478867,- | |||
|id=chr11:69478859..69478867,- | |||
|ontology_enrichment_celltype=CL:0002194!8.12e-09!4;CL:0000766!8.12e-09!4;CL:0000576!8.12e-09!4;CL:0000235!8.12e-09!4;CL:0002009!8.12e-09!4;CL:0000040!8.12e-09!4;CL:0000559!8.12e-09!4;CL:0002092!3.83e-07!3;CL:0002540!3.83e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.12e-43,4;CL:0000766,1.12e-43,4;CL:0000234,1.12e-43,4;CL:0000576,1.12e-43,4;CL:0000235,1.12e-43,4;CL:0000864,1.12e-43,4;CL:0002009,1.12e-43,4;CL:0000040,1.12e-43,4;CL:0000559,1.12e-43,4;CL:0002092,6.12e-34,3;CL:0002540,6.12e-34,3;CL:0000473,3.04e-25,7;CL:0000557,3.04e-25,7;CL:0002476,5.10e-23,2;CL:0000878,2.32e-22,2;CL:0000129,2.32e-22,2;CL:0000839,7.69e-14,13;CL:0002320,1.00e-11,46;CL:0000134,1.00e-11,46;CL:0000763,2.49e-11,16;CL:0000738,1.09e-10,17;CL:0002087,1.09e-10,17;CL:0000219,5.55e-10,54;CL:0000049,1.32e-09,19;CL:0002031,2.18e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.47e-09!16;UBERON:0002204!7.88e-09!32;UBERON:0001474!4.08e-07!22;UBERON:0004765!4.08e-07!22;UBERON:0001434!4.08e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.54e-33,16;UBERON:0001474,1.90e-24,22;UBERON:0004765,1.90e-24,22;UBERON:0001434,1.90e-24,22;UBERON:0002204,7.62e-17,32;UBERON:0002390,5.49e-12,45;UBERON:0003061,5.49e-12,45;UBERON:0002384,1.00e-11,46;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.315462165358238,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0,0,0.485510353031154,0,0,0,0,0,0.659058548203415,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,19.7977937801908,52.4099172160496,19.8934432184908,7.78960287347852,5.76327457982332,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.289298117163023,21.1107797514981,8.70249094109935,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr11:69478859..69478867,- | |||
}} |
Revision as of 20:38, 12 September 2013
Short description: | p@chr11:69478859..69478867, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69478859..69478867, - |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.12e-43 | 4 |
myeloid leukocyte | 1.12e-43 | 4 |
phagocyte | 1.12e-43 | 4 |
monocyte | 1.12e-43 | 4 |
macrophage | 1.12e-43 | 4 |
tissue-resident macrophage | 1.12e-43 | 4 |
macrophage dendritic cell progenitor | 1.12e-43 | 4 |
monoblast | 1.12e-43 | 4 |
promonocyte | 1.12e-43 | 4 |
bone marrow cell | 6.12e-34 | 3 |
mesenchymal stem cell of the bone marrow | 6.12e-34 | 3 |
defensive cell | 3.04e-25 | 7 |
granulocyte monocyte progenitor cell | 3.04e-25 | 7 |
bone marrow macrophage | 5.10e-23 | 2 |
central nervous system macrophage | 2.32e-22 | 2 |
microglial cell | 2.32e-22 | 2 |
myeloid lineage restricted progenitor cell | 7.69e-14 | 13 |
connective tissue cell | 1.00e-11 | 46 |
mesenchymal cell | 1.00e-11 | 46 |
myeloid cell | 2.49e-11 | 16 |
leukocyte | 1.09e-10 | 17 |
nongranular leukocyte | 1.09e-10 | 17 |
motile cell | 5.55e-10 | 54 |
common myeloid progenitor | 1.32e-09 | 19 |
hematopoietic lineage restricted progenitor cell | 2.18e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.54e-33 | 16 |
bone element | 1.90e-24 | 22 |
skeletal element | 1.90e-24 | 22 |
skeletal system | 1.90e-24 | 22 |
musculoskeletal system | 7.62e-17 | 32 |
hematopoietic system | 5.49e-12 | 45 |
blood island | 5.49e-12 | 45 |
connective tissue | 1.00e-11 | 46 |
hemolymphoid system | 3.09e-11 | 48 |
immune system | 3.09e-11 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.