FFCP PHASE1:Hg19::chr2:98330032..98330054,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7535|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12858|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000483781_5end|coexpression_cluster_id=C1121|description=CAGE_peak_1_at_ZAP70_5end|id=chr2:98330032..98330054,+|ontology_enrichment_celltype=CL:0000738!2.39e-35!140;CL:0002087!2.79e-30!119;CL:0000037!1.33e-26!172;CL:0000566!1.33e-26!172;CL:0002031!2.94e-26!124;CL:0000084!8.47e-25!25;CL:0000827!8.47e-25!25;CL:0000988!7.23e-24!182;CL:0002032!2.17e-23!165;CL:0000837!2.17e-23!165;CL:0000542!1.52e-21!53;CL:0000051!1.52e-21!53;CL:0000838!3.28e-21!52;CL:0000791!6.50e-19!18;CL:0000789!6.50e-19!18;CL:0002420!6.50e-19!18;CL:0002419!6.50e-19!18;CL:0000790!6.50e-19!18;CL:0000625!1.91e-12!11;CL:0000766!2.93e-12!76;CL:0002057!1.12e-10!42;CL:0000860!2.41e-09!45;CL:0000557!5.52e-09!71;CL:0002194!9.71e-09!63;CL:0000576!9.71e-09!63;CL:0000040!9.71e-09!63;CL:0000559!9.71e-09!63;CL:0000839!1.47e-08!70;CL:0002009!3.76e-08!65;CL:0000624!2.69e-07!6;CL:0000763!6.12e-07!112;CL:0000049!6.12e-07!112|ontology_enrichment_celltype_v019=CL:0000084;8.52e-37;25!CL:0000791;7.35e-28;18!CL:0000789;7.35e-28;18!CL:0002419;7.35e-28;18!CL:0000625;4.75e-18;11!CL:0000542;5.26e-18;53!CL:0000624;3.06e-10;6!CL:0002087;1.92e-09;104!CL:0000738;3.08e-07;136|ontology_enrichment_celltype_v019_2=CL:0000084,8.00e-37,25;CL:0000827,8.00e-37,25;CL:0000838,5.25e-30,52;CL:0000738,1.75e-29,136;CL:0000542,3.34e-29,53;CL:0000051,3.34e-29,53;CL:0000791,7.15e-28,18;CL:0000789,7.15e-28,18;CL:0002420,7.15e-28,18;CL:0002419,7.15e-28,18;CL:0000790,7.15e-28,18;CL:0002087,2.86e-25,115;CL:0000037,1.21e-23,168;CL:0000988,2.11e-21,177;CL:0002031,6.15e-21,120;CL:0002032,2.31e-20,161;CL:0000837,2.31e-20,161;CL:0000625,4.78e-18,11;CL:0000624,2.95e-10,6|ontology_enrichment_development_v019=CL:0000790;7.35e-28;18!CL:0000051;5.26e-18;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.62e-17!115;UBERON:0002390!1.39e-15!102;UBERON:0003061!1.39e-15!102;UBERON:0002193!4.28e-14!112;UBERON:0000178!1.58e-08!15;UBERON:0000179!1.58e-08!15;UBERON:0000463!1.58e-08!15;UBERON:0002405!2.16e-07!115;UBERON:0002371!2.62e-07!80|ontology_enrichment_uberon_v019=UBERON:0000178;6.49e-13;15!UBERON:0000179;6.49e-13;15!UBERON:0000463;6.49e-13;15!UBERON:0002390;3.31e-10;32!UBERON:0002193;9.69e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.63e-13,15;UBERON:0000179,6.63e-13,15;UBERON:0000463,6.63e-13,15;UBERON:0002390,2.05e-10,98;UBERON:0003061,2.05e-10,98;UBERON:0002193,5.29e-10,108;UBERON:0004177,5.06e-08,7;UBERON:0005057,5.06e-08,7;UBERON:0002370,2.49e-07,4;UBERON:0005058,2.49e-07,4;UBERON:0009113,2.49e-07,4;UBERON:0003295,2.49e-07,4;UBERON:0005562,2.49e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6350352266897,29.9386930515826,14.243083345079,0,0,0,0,0,1.46800219667424,19.3898392986157,16.0435557976113,20.8330435887218,2.23915474239924,10.3645973126073,2.57575567634187,0.872389432677388,0.377875943688809,0.485168122375632,0.232429036905685,0.822335776043652,0.309706370895104,0.575384784644301,0.256160706529101,0.945928919554341,1.03423704220986,1.93645405075148,0,0,0.545812300115692,0.898893937780338,0.918251677112708,1.92557416245656,1.27867425159808,0.329851300186716,0.797854630486527,0.426224750532694,0.290209238628584,1.13477044938228,1.24564449799115,0.502497330513487,2.60741459210101,0.217188844705117,3.02699751316684,1.47311054395026,0.949387162322653,0,0,0.209658645508376,0,0,0,0.570025487482497,0,0,0,2.18455444504853,3.55803701545422,0.853460445133014,0.400395987036012,1.14950487990897,0.661044872784862,1.90810750907073,2.84606484554724,3.52342313622563,2.29363936875137,0,8.96813700770458,1.31692042387539,76.9135201145087,102.968819840281,108.76319297074,67.8777171286153,90.6063901241381,103.211621650172,103.258166056193,80.5497603279805,72.1784473313351,64.4663633238337,65.8053388948988,87.8706453318132,73.4835313713312,97.6761153345836,98.9333063673337,103.169898521679,137.313357488068,135.375659013395,160.984706659664,71.9514326129545,91.9729184644611,106.180880654133,90.3280300509625,108.312240870193,108.079853340165,103.599272844873,93.9588743045302,96.1179449769682,109.939039366064,108.680758688204,75.5437757167363,99.3921244097931,96.5459106778462,111.369966585872,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.702678285545008,1.24430121722827,0,0,0,1.0447784237956,0.531831842075461,1.90792499444274,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,23.2668158488995,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62671520017326,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,373.03631900538,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,1.24396869324463,0.288239906833923,0.8836970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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7535 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12858 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000483781_5end | |||
|coexpression_cluster_id=C1121 | |||
|description=CAGE_peak_1_at_ZAP70_5end | |||
|id=chr2:98330032..98330054,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.39e-35!140;CL:0002087!2.79e-30!119;CL:0000037!1.33e-26!172;CL:0000566!1.33e-26!172;CL:0002031!2.94e-26!124;CL:0000084!8.47e-25!25;CL:0000827!8.47e-25!25;CL:0000988!7.23e-24!182;CL:0002032!2.17e-23!165;CL:0000837!2.17e-23!165;CL:0000542!1.52e-21!53;CL:0000051!1.52e-21!53;CL:0000838!3.28e-21!52;CL:0000791!6.50e-19!18;CL:0000789!6.50e-19!18;CL:0002420!6.50e-19!18;CL:0002419!6.50e-19!18;CL:0000790!6.50e-19!18;CL:0000625!1.91e-12!11;CL:0000766!2.93e-12!76;CL:0002057!1.12e-10!42;CL:0000860!2.41e-09!45;CL:0000557!5.52e-09!71;CL:0002194!9.71e-09!63;CL:0000576!9.71e-09!63;CL:0000040!9.71e-09!63;CL:0000559!9.71e-09!63;CL:0000839!1.47e-08!70;CL:0002009!3.76e-08!65;CL:0000624!2.69e-07!6;CL:0000763!6.12e-07!112;CL:0000049!6.12e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.52e-37;25!CL:0000791;7.35e-28;18!CL:0000789;7.35e-28;18!CL:0002419;7.35e-28;18!CL:0000625;4.75e-18;11!CL:0000542;5.26e-18;53!CL:0000624;3.06e-10;6!CL:0002087;1.92e-09;104!CL:0000738;3.08e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.00e-37,25;CL:0000827,8.00e-37,25;CL:0000838,5.25e-30,52;CL:0000738,1.75e-29,136;CL:0000542,3.34e-29,53;CL:0000051,3.34e-29,53;CL:0000791,7.15e-28,18;CL:0000789,7.15e-28,18;CL:0002420,7.15e-28,18;CL:0002419,7.15e-28,18;CL:0000790,7.15e-28,18;CL:0002087,2.86e-25,115;CL:0000037,1.21e-23,168;CL:0000988,2.11e-21,177;CL:0002031,6.15e-21,120;CL:0002032,2.31e-20,161;CL:0000837,2.31e-20,161;CL:0000625,4.78e-18,11;CL:0000624,2.95e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000790;7.35e-28;18!CL:0000051;5.26e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-17!115;UBERON:0002390!1.39e-15!102;UBERON:0003061!1.39e-15!102;UBERON:0002193!4.28e-14!112;UBERON:0000178!1.58e-08!15;UBERON:0000179!1.58e-08!15;UBERON:0000463!1.58e-08!15;UBERON:0002405!2.16e-07!115;UBERON:0002371!2.62e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.49e-13;15!UBERON:0000179;6.49e-13;15!UBERON:0000463;6.49e-13;15!UBERON:0002390;3.31e-10;32!UBERON:0002193;9.69e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.63e-13,15;UBERON:0000179,6.63e-13,15;UBERON:0000463,6.63e-13,15;UBERON:0002390,2.05e-10,98;UBERON:0003061,2.05e-10,98;UBERON:0002193,5.29e-10,108;UBERON:0004177,5.06e-08,7;UBERON:0005057,5.06e-08,7;UBERON:0002370,2.49e-07,4;UBERON:0005058,2.49e-07,4;UBERON:0009113,2.49e-07,4;UBERON:0003295,2.49e-07,4;UBERON:0005562,2.49e-07,4 | |||
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| |||
|short_description=p1@ZAP70 | |||
}} |
Revision as of 20:21, 12 September 2013
Short description: | p1@ZAP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZAP70_5end |
Coexpression cluster: | C1121_Hodgkin_CD4_acute_CD8_thymus_Natural_chronic |
Association with transcript: | 0bp_to_ENST00000483781_5end |
EntrezGene: | ZAP70 |
HGNC: | 12858 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.00e-37 | 25 |
pro-T cell | 8.00e-37 | 25 |
lymphoid lineage restricted progenitor cell | 5.25e-30 | 52 |
leukocyte | 1.75e-29 | 136 |
lymphocyte | 3.34e-29 | 53 |
common lymphoid progenitor | 3.34e-29 | 53 |
mature alpha-beta T cell | 7.15e-28 | 18 |
alpha-beta T cell | 7.15e-28 | 18 |
immature T cell | 7.15e-28 | 18 |
mature T cell | 7.15e-28 | 18 |
immature alpha-beta T cell | 7.15e-28 | 18 |
nongranular leukocyte | 2.86e-25 | 115 |
hematopoietic stem cell | 1.21e-23 | 168 |
hematopoietic cell | 2.11e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 6.15e-21 | 120 |
hematopoietic oligopotent progenitor cell | 2.31e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-20 | 161 |
CD8-positive, alpha-beta T cell | 4.78e-18 | 11 |
CD4-positive, alpha-beta T cell | 2.95e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 6.63e-13 | 15 |
haemolymphatic fluid | 6.63e-13 | 15 |
organism substance | 6.63e-13 | 15 |
hematopoietic system | 2.05e-10 | 98 |
blood island | 2.05e-10 | 98 |
hemolymphoid system | 5.29e-10 | 108 |
hemopoietic organ | 5.06e-08 | 7 |
immune organ | 5.06e-08 | 7 |
thymus | 2.49e-07 | 4 |
hemolymphoid system gland | 2.49e-07 | 4 |
thymic region | 2.49e-07 | 4 |
pharyngeal gland | 2.49e-07 | 4 |
thymus primordium | 2.49e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.