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FFCP PHASE1:Mm9::chr11:59918554..59918580,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19377|HGNC=|UniProt=Q61818,Q810L5|association_with_transcript=39bp_to_ENSMUST00000064190,ENSMUST00000149770,NM_009021,uc007jfk.1,uc011xvq.1_5end|description=CAGE_peak_1_at_Rai1_5end|id=chr11:59918554..59918580,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!2.04e-11!42;UBERON:0000065!4.89e-11!41;UBERON:0003408!6.48e-08!24;UBERON:0002370!1.50e-07!23;UBERON:0000974!1.50e-07!23;UBERON:0004807!1.50e-07!23;UBERON:0005058!1.50e-07!23;UBERON:0003351!1.50e-07!23;UBERON:0009113!1.50e-07!23;UBERON:0003295!1.50e-07!23;UBERON:0009722!1.50e-07!23;UBERON:0005562!1.50e-07!23;UBERON:0007690!1.50e-07!23;UBERON:0000072!1.84e-07!27;UBERON:0006562!2.05e-07!24;UBERON:0001557!2.05e-07!24;UBERON:0001042!2.05e-07!24;UBERON:0008814!2.05e-07!24;UBERON:0009145!2.05e-07!24;UBERON:0000153!7.68e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.86e-11,42;UBERON:0000065,4.46e-11,41;UBERON:0000153,8.39e-10,43;UBERON:0003408,5.89e-08,24;UBERON:0002370,1.36e-07,23;UBERON:0000974,1.36e-07,23;UBERON:0004807,1.36e-07,23;UBERON:0005058,1.36e-07,23;UBERON:0003351,1.36e-07,23;UBERON:0009113,1.36e-07,23;UBERON:0003295,1.36e-07,23;UBERON:0009722,1.36e-07,23;UBERON:0005562,1.36e-07,23;UBERON:0007690,1.36e-07,23;UBERON:0000072,1.68e-07,27;UBERON:0007811,1.71e-07,36;UBERON:0006562,1.87e-07,24;UBERON:0001557,1.87e-07,24;UBERON:0001042,1.87e-07,24;UBERON:0008814,1.87e-07,24;UBERON:0009145,1.87e-07,24|phase1_expression=12.1713123799643,0.348975407639361,0.454999239389536,0,1.00179145989269,4.53274034162102,3.73780224952841,10.4589891987677,46.7418557543534,60.3886477910743,8.90333434772626,13.2421783932258,11.4704489053908,11.2772319120507,1.99865857089398,2.42970320867791,0.699561878128147,3.94327706697797,2.33094537129756,4.2438965179803,8.1641558545027,9.23405846168233,4.96279599363977,0.47997726838022,0.45881856213434,0,1.7230479846363,0.861884930743556,0.570070258369122,0.504060259519861,1.10865255327652,12.7006134691926,9.22597181376855,0,2.88851619751275,3.49092755252834,2.85837098767317,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0.485510353031154,10.4494358919729,9.52943153463437,10.2786181210542,11.7358701652206,10.247182349881,7.24964403023757,7.58276606389705,6.43937539476668,5.75010257459886,3.85899993932794,22.4862264023517,24.1987535382574,11.5766746216176,11.747871037489,8.76642556871652,8.29497489524351,3.70293685490423,6.33831403506179,5.42151251310611,1.77858959222228,2.2497492932035,0.988866362566974,2.1314403448383,7.49000276296012,8.4528027170742,11.0947885170071,11.4755047581937,9.25429829946081,4.85606673486466,6.40518768759679,6.49201235839256,6.61333750025831,4.5960939330501,6.60695285996332,6.51205424234457,7.0659005297872,7.64940468835124,6.77008562657831,7.29278718779464,4.18774498502071,3.93933827022176,8.25110537994775,7.36571463684169,4.8406371471695,9.31997229126503,5.98236927332154,5.44115232768856,12.7540375028738,2.58127163094416,6.11974200336975,0.539703191637817,1.94932925234301,1.79210754838934,6.17955448579708,4.09032774187339,4.67614808285164,2.12003744706204,12.8167511996779,2.56652954828636,0,21.3320010945999,11.9070072556168,10.8944742154292,10.1104889002957,5.25245846707676,8.02707439306232,13.3597925158342,7.63335437770998,13.7009465240464,8.53277339847416,8.13902258984162,13.7578787348775,7.41432888845085,3.21353458054686,8.96516012903452,9.73071607144862,13.426648545635,12.5879665522424,7.75800405016355,1.86391761218122,4.09893115816166,1.67557365450764,2.04365644166873,12.3409578241098,7.19883277192089,6.86179226194549,7.9389038884556,12.8100168789215,6.53402630986895,12.5153510538439,9.2057564638919,8.3115217823824,8.11206315338788,17.720049309955,10.2013715900276,9.09801930361229,6.52369753248069,13.1421647392331,8.5063778640385,8.46292010085141,8.28876498096433,14.1515918234762,10.3772113430728,11.9001190190856,9.05461797586555,19.8322553498215,26.0966390631591,21.1141348996739,12.9325482132269,15.8486932058591,13.9300866608867,9.67176041117334,10.7478504081986,4.21327912387941,4.11756651383544,7.38825098428541,16.9843133479112,16.4168241986767,10.4435995647389,13.2577051927718,12.7896750635812,12.1871019181029,10.9290954032692,9.92611585178591,10.0418194435766,11.1900697941167,11.3275550214576,14.7545233373457,14.3275987676826,10.0993053033883,10.3338942445486,7.57043814830858,10.3933658503077,0.660837565967596,1.58670339998127,17.276348293354,17.8822237332538,13.9176858227861,9.68080918192044,7.56085349072559,6.08722003560189,3.32170343081158,5.10566759644434,5.52937459360593,7.56034593756373,3.31438948102504,0.898819408654221,1.51296634912286,2.38969527905241,12.7077493638565,9.93962059704641,16.9061603509621,11.6081256871829,12.0250542043928,12.6244475802573,10.4972651626267,5.60918562322488,4.08196692387575,7.03363834354263,2.07516838961004,5.83957870006329,4.71741588271687,3.59779379815766,2.23146133527353,2.894125917029,3.5647619249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|EntrezGene=19377
|HGNC=
|UniProt=Q61818,Q810L5
|association_with_transcript=39bp_to_ENSMUST00000064190,ENSMUST00000149770,NM_009021,uc007jfk.1,uc011xvq.1_5end
|description=CAGE_peak_1_at_Rai1_5end
|id=chr11:59918554..59918580,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!2.04e-11!42;UBERON:0000065!4.89e-11!41;UBERON:0003408!6.48e-08!24;UBERON:0002370!1.50e-07!23;UBERON:0000974!1.50e-07!23;UBERON:0004807!1.50e-07!23;UBERON:0005058!1.50e-07!23;UBERON:0003351!1.50e-07!23;UBERON:0009113!1.50e-07!23;UBERON:0003295!1.50e-07!23;UBERON:0009722!1.50e-07!23;UBERON:0005562!1.50e-07!23;UBERON:0007690!1.50e-07!23;UBERON:0000072!1.84e-07!27;UBERON:0006562!2.05e-07!24;UBERON:0001557!2.05e-07!24;UBERON:0001042!2.05e-07!24;UBERON:0008814!2.05e-07!24;UBERON:0009145!2.05e-07!24;UBERON:0000153!7.68e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.86e-11,42;UBERON:0000065,4.46e-11,41;UBERON:0000153,8.39e-10,43;UBERON:0003408,5.89e-08,24;UBERON:0002370,1.36e-07,23;UBERON:0000974,1.36e-07,23;UBERON:0004807,1.36e-07,23;UBERON:0005058,1.36e-07,23;UBERON:0003351,1.36e-07,23;UBERON:0009113,1.36e-07,23;UBERON:0003295,1.36e-07,23;UBERON:0009722,1.36e-07,23;UBERON:0005562,1.36e-07,23;UBERON:0007690,1.36e-07,23;UBERON:0000072,1.68e-07,27;UBERON:0007811,1.71e-07,36;UBERON:0006562,1.87e-07,24;UBERON:0001557,1.87e-07,24;UBERON:0001042,1.87e-07,24;UBERON:0008814,1.87e-07,24;UBERON:0009145,1.87e-07,24
|phase1_expression=12.1713123799643,0.348975407639361,0.454999239389536,0,1.00179145989269,4.53274034162102,3.73780224952841,10.4589891987677,46.7418557543534,60.3886477910743,8.90333434772626,13.2421783932258,11.4704489053908,11.2772319120507,1.99865857089398,2.42970320867791,0.699561878128147,3.94327706697797,2.33094537129756,4.2438965179803,8.1641558545027,9.23405846168233,4.96279599363977,0.47997726838022,0.45881856213434,0,1.7230479846363,0.861884930743556,0.570070258369122,0.504060259519861,1.10865255327652,12.7006134691926,9.22597181376855,0,2.88851619751275,3.49092755252834,2.85837098767317,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0.485510353031154,10.4494358919729,9.52943153463437,10.2786181210542,11.7358701652206,10.247182349881,7.24964403023757,7.58276606389705,6.43937539476668,5.75010257459886,3.85899993932794,22.4862264023517,24.1987535382574,11.5766746216176,11.747871037489,8.76642556871652,8.29497489524351,3.70293685490423,6.33831403506179,5.42151251310611,1.77858959222228,2.2497492932035,0.988866362566974,2.1314403448383,7.49000276296012,8.4528027170742,11.0947885170071,11.4755047581937,9.25429829946081,4.85606673486466,6.40518768759679,6.49201235839256,6.61333750025831,4.5960939330501,6.60695285996332,6.51205424234457,7.0659005297872,7.64940468835124,6.77008562657831,7.29278718779464,4.18774498502071,3.93933827022176,8.25110537994775,7.36571463684169,4.8406371471695,9.31997229126503,5.98236927332154,5.44115232768856,12.7540375028738,2.58127163094416,6.11974200336975,0.539703191637817,1.94932925234301,1.79210754838934,6.17955448579708,4.09032774187339,4.67614808285164,2.12003744706204,12.8167511996779,2.56652954828636,0,21.3320010945999,11.9070072556168,10.8944742154292,10.1104889002957,5.25245846707676,8.02707439306232,13.3597925158342,7.63335437770998,13.7009465240464,8.53277339847416,8.13902258984162,13.7578787348775,7.41432888845085,3.21353458054686,8.96516012903452,9.73071607144862,13.426648545635,12.5879665522424,7.75800405016355,1.86391761218122,4.09893115816166,1.67557365450764,2.04365644166873,12.3409578241098,7.19883277192089,6.86179226194549,7.9389038884556,12.8100168789215,6.53402630986895,12.5153510538439,9.2057564638919,8.3115217823824,8.11206315338788,17.720049309955,10.2013715900276,9.09801930361229,6.52369753248069,13.1421647392331,8.5063778640385,8.46292010085141,8.28876498096433,14.1515918234762,10.3772113430728,11.9001190190856,9.05461797586555,19.8322553498215,26.0966390631591,21.1141348996739,12.9325482132269,15.8486932058591,13.9300866608867,9.67176041117334,10.7478504081986,4.21327912387941,4.11756651383544,7.38825098428541,16.9843133479112,16.4168241986767,10.4435995647389,13.2577051927718,12.7896750635812,12.1871019181029,10.9290954032692,9.92611585178591,10.0418194435766,11.1900697941167,11.3275550214576,14.7545233373457,14.3275987676826,10.0993053033883,10.3338942445486,7.57043814830858,10.3933658503077,0.660837565967596,1.58670339998127,17.276348293354,17.8822237332538,13.9176858227861,9.68080918192044,7.56085349072559,6.08722003560189,3.32170343081158,5.10566759644434,5.52937459360593,7.56034593756373,3.31438948102504,0.898819408654221,1.51296634912286,2.38969527905241,12.7077493638565,9.93962059704641,16.9061603509621,11.6081256871829,12.0250542043928,12.6244475802573,10.4972651626267,5.60918562322488,4.08196692387575,7.03363834354263,2.07516838961004,5.83957870006329,4.71741588271687,3.59779379815766,2.23146133527353,2.894125917029,3.56476192493988,3.45235364940973,5.0261920300261,2.74561413188081,10.0637744569148,2.60498663367952,5.61667811606209,2.77836765741823,2.15276896226295,3.85954817090694,7.944387177164,12.6959245886225,22.4891667489996,17.8232340063948,17.8364588699262,19.2632196058088,19.2815349117671,16.5863600679129,21.1231093102296,20.3747514476873,20.2507556195009,9.01248230936559,10.0157289482219,8.24499633914616,1.50791283939272,0.54390568381871,7.86822836830458,12.417153583713,6.26147300952389,5.27452589664914,5.57378814280696,8.58401152494868,16.7219356290616,16.3984272604588,17.0184484208911,23.1799734013975,17.6010952525091,15.8522857241746,24.6934528021686,21.3346776275258,23.3219788988449,14.4594592389813,8.09058485687131,12.6426578603751,17.2660176914791,11.8778488540226,7.96470830039777,9.46844481004428,11.4882951646605,6.03536255218874,9.44966057218473,10.1453598821496,9.30341855405596,9.81541069589265,8.91243445961803,6.63677191665214,1.05418608574999,7.21948802737308,11.234506989875,13.5045820523483,19.9212373025442,13.2888961719587,15.4286003268778,13.1992925025532,7.56925494769756,12.178597964584,3.52007562095566,2.1183207086382,3.30792597082443,7.25499512942512,16.3079070962865,10.9166394119962,5.37175548014114,5.25250879184196,2.04036585640896,7.6024373824309,2.39219233116994,9.49379592630823,9.63011542322501,4.1441060541032,1.6403307326523,1.83022538565218,24.646872349109,17.2140286358099,20.5917960968591,3.81868247206045,18.5056556244964,14.2323626988794,9.50446999231851,7.94535524854981,7.42432716737004,8.90104686139817,12.9765925488777,4.97336289769656,3.36998930558661,14.9121435140862,1.12738587736838,11.5127740453864,8.76929999422617,7.58359634541786,7.4912697617084,6.75824501963113,10.7968659554094,10.8069639420479,11.3248091979768,5.55643477899814,3.16833006883652,45.5056013704577,8.10900861160657,13.4551353885924,11.9527157139571,17.9026695667481,31.7890167650024,35.4576576083908,31.4578692881849,31.7034652837184,40.0847803005299,43.0527810534309,52.9196292416856,39.9279142807367,52.0102214707982,9.9761368790693,1.99787358036658,0.897138566094757,2.01461539636894,15.0687883345109,3.94133198447482,9.52388446189778,4.93047271881851,11.5361583928134,11.2950368523413,14.2700823317225,10.8850147553485,11.5141632170271,9.59115527678899,10.5755145634558,11.4753825039407,12.158672487054,9.5159905886683,11.39072685854,11.6241829294278,16.7590446828433,11.6098851912811,13.3708694387562,9.85181864351517,9.37601893095072,10.4455962066759,11.743998262617,13.4786068028562,10.3605856823157,8.36481689637791,12.8265912142532,9.83235828433765,13.0611310905933,10.7404326946997,10.9547548995107,11.9360855723201,10.8029163459675,8.65380391686944,10.5983222496766,10.6289468239479,8.87379030796687,9.0605752179982,12.0637525804833,13.081203877731,12.0152743206181,10.426894453748,11.0489278803894,10.8643291076689,15.1508413347589,14.1175671567767,12.3130602969454,9.00308294973317,12.3949472948773,11.1885834369062,9.99242311751784,7.95367468714389,16.1153290536224,16.0682198937828,12.5737108898124,12.0571274522619
|short_description=p1@Rai1
}}

Revision as of 20:12, 12 September 2013

Short description:p1@Rai1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rai1_5end
Coexpression cluster:NA
Association with transcript: 39bp_to_ENSMUST00000064190, ENSMUST00000149770, NM_009021, uc007jfk.1, uc011xvq.1_5end
EntrezGene:Rai1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rai1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E746.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F260.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I922.49
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.77
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D95.98
Mouse Schwann, donor2.CNhs12573.11746-123F95.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H98.03
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D613.70
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C113.76
adrenal gland, neonate N25.CNhs11223.1377-27I37.41
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H18.97
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F513.43
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.86
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D512.52
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.20
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C613.14
eyeball, embryo E14.CNhs10521.399-16E28.51
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D48.29
eyeball, neonate N00.CNhs11207.633-15C614.15
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G811.90
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E219.83
forelimb, embryo E12.CNhs10600.359-14H226.10
forelimb, embryo E13.CNhs10589.384-1E221.11
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I610.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E916.98
heart, embryo E12.CNhs11015.353-12F516.42
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C812.79
heart, embryo E16.CNhs11021.457-17C612.19
heart, embryo E17.CNhs11025.479-18E510.93
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E310.04
heart, neonate N03.CNhs11221.1349-25I211.19
heart, neonate N10.CNhs11118.749-24G111.33
heart, neonate N16.CNhs11209.782-15G114.75
heart, neonate N20.CNhs11127.821-26I614.33
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I517.28
intestine, embryo E13.CNhs11010.381-16D517.88
intestine, embryo E15.CNhs10602.976-16D813.92
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F89.94
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C712.03
kidney, neonate N00.CNhs11214.646-21G712.62
kidney, neonate N10.CNhs11206.758-6D510.50
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H17.03
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C517.82
lung, embryo E16.CNhs10998.458-17B617.84
lung, embryo E17.CNhs10605.480-44A619.26
lung, embryo E18.CNhs10583.1287-20I619.28
lung, neonate N00.CNhs11224.640-42C616.59
lung, neonate N06.CNhs11212.683-20E521.12
lung, neonate N07.CNhs11111.715-19A320.37
lung, neonate N10.CNhs11219.750-23E620.25
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C710.02
lung, neonate N30.CNhs11133.1394-42H28.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A35.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.18
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.32
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I78.09
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I417.27
oviduct, adult pregnant day01.CNhs10500.988-6G611.88
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F49.47
pancreas, embryo E15.CNhs11042.1556-45F211.49
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B66.64
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E613.50
pituitary gland, embryo E13.CNhs11009.370-44C719.92
pituitary gland, embryo E14.CNhs11037.398-44A513.29
pituitary gland, embryo E15.CNhs10592.427-16B915.43
pituitary gland, embryo E16.CNhs11036.449-43F613.20
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E912.18
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G416.31
skin, neonate N03.CNhs11215.662-22H310.92
skin, neonate N06.CNhs11097.693-20I55.37
skin, neonate N10.CNhs11108.762-6C45.25
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.59
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E318.51
stomach, embryo E15.CNhs10603.1252-16G814.23
stomach, embryo E16.CNhs11022.459-17D49.50
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B88.90
stomach, neonate N07.CNhs11210.718-18A912.98
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C58.77
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I57.49
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B710.80
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D911.32
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B545.51
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I213.46
thymus, embryo E16.CNhs11002.456-26C511.95
thymus, embryo E17.CNhs10581.478-18C117.90
thymus, embryo E18.CNhs10595.1273-19G431.79
thymus, neonate N02.CNhs11181.1541-43F835.46
thymus, neonate N03.CNhs11137.2104-43C731.46
thymus, neonate N06.CNhs11197.681-26C431.70
thymus, neonate N07.CNhs11211.713-19D340.08
thymus, neonate N10.CNhs11194.748-24E443.05
thymus, neonate N20.CNhs11186.820-7A252.92
thymus, neonate N25.CNhs11125.1362-25G739.93
thymus, neonate N30.CNhs11132.1393-42G252.01
tongue, adult.CNhs10499.32-1B49.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E59.52
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I811.62
whole body, embryo E12.CNhs10587.857-27C916.76
whole body, embryo E13.CNhs10512.372-23H211.61
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B19.85
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.31
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C216.12
whole body, neonate N01.CNhs10576.659-23C616.07
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B412.06





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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