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FFCP PHASE1:Mm9::chr11:59918517..59918537,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=19377|HGNC=|UniProt=Q61818,Q810L5|association_with_transcript=2bp_to_ENSMUST00000064190,ENSMUST00000149770,NM_009021,uc007jfk.1,uc011xvq.1_5end|description=CAGE_peak_3_at_Rai1_5end|id=chr11:59918517..59918537,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.08e-11!94;UBERON:0007811!8.10e-10!86;UBERON:0001004!5.49e-09!42;UBERON:0003408!6.08e-09!24;UBERON:0000065!8.47e-09!41;UBERON:0002370!8.69e-09!23;UBERON:0000974!8.69e-09!23;UBERON:0004807!8.69e-09!23;UBERON:0005058!8.69e-09!23;UBERON:0003351!8.69e-09!23;UBERON:0009113!8.69e-09!23;UBERON:0003295!8.69e-09!23;UBERON:0009722!8.69e-09!23;UBERON:0005562!8.69e-09!23;UBERON:0007690!8.69e-09!23;UBERON:0006562!4.61e-08!24;UBERON:0001557!4.61e-08!24;UBERON:0001042!4.61e-08!24;UBERON:0008814!4.61e-08!24;UBERON:0009145!4.61e-08!24;UBERON:0000479!2.54e-07!349;UBERON:0000468!8.14e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001004,4.99e-09,42;UBERON:0003408,5.38e-09,24;UBERON:0002370,7.69e-09,23;UBERON:0000974,7.69e-09,23;UBERON:0004807,7.69e-09,23;UBERON:0005058,7.69e-09,23;UBERON:0003351,7.69e-09,23;UBERON:0009113,7.69e-09,23;UBERON:0003295,7.69e-09,23;UBERON:0009722,7.69e-09,23;UBERON:0005562,7.69e-09,23;UBERON:0007690,7.69e-09,23;UBERON:0000065,7.70e-09,41;UBERON:0000153,1.89e-08,43;UBERON:0006562,4.11e-08,24;UBERON:0001557,4.11e-08,24;UBERON:0001042,4.11e-08,24;UBERON:0008814,4.11e-08,24;UBERON:0009145,4.11e-08,24;UBERON:0000479,2.58e-07,349|phase1_expression=2.24208385946712,0,0.909998478779072,0.30246421130683,1.50268718983904,1.51091344720701,1.63528848416868,7.10178278928669,9.01047821770667,11.0010327371337,5.65019295144166,6.94017783259427,7.19043065711064,6.29426897416781,0.666219523631325,1.21485160433896,3.49780939064073,3.47008381894061,1.7824876368746,2.97072756258621,3.99703463710028,2.6808556824239,2.87319768052829,1.27993938234725,0,0.57423196411502,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,1.33038306393183,3.17515336729816,3.07532393792285,0,2.02196133825892,1.82858109894342,1.22501613757421,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0,4.28049181116963,3.85232338634155,4.9557623083654,3.12956537739216,1.30815093828268,4.39372365468944,4.6663175777828,1.81982348112971,4.31257693094915,1.51004345451963,10.1550699881588,9.41062637598899,2.57259436035947,3.43840127926508,2.06268836910977,4.45096213891115,3.70293685490423,6.33831403506179,2.37191172448392,3.55717918444456,2.2497492932035,3.9554654502679,1.4209602298922,2.99600110518405,3.84218305321555,6.84351441235953,6.07526722492608,7.57169860864975,4.85606673486466,2.65042249141936,4.28717797252339,4.79227355091182,6.43453150627015,2.20231761998777,6.12899222808901,3.99376986466233,5.27545150920775,6.22115976496386,4.68822033501084,1.67509799400829,3.93933827022176,4.5839474333043,5.30331453852602,4.8406371471695,6.33758115806022,3.93776205332557,1.5870027622425,7.53647670624362,4.30211938490693,3.39985666853875,1.07940638327563,0.649776417447669,0.896053774194671,1.54488862144927,1.53387290320252,1.29893002301434,0.70667914902068,1.40843419776681,2.56652954828636,0,7.11066703153331,3.46385665617943,1.26679932737549,3.0331466700887,1.59857431606684,3.36619248741323,5.34391700633369,3.64319186208885,5.1759131313064,3.45923245884088,3.46662073271032,6.11461277105665,3.01599819191221,0.988779870937496,5.35017620603673,0.884610551949874,4.69123864847487,5.96272099843063,3.39412677194655,0,8.78342391034641,5.44561437714983,1.27728527604296,2.87556298814209,0,1.27070227073065,5.99162557619291,8.23501085073528,6.78533501409468,6.25767552692195,7.41574826257959,5.61027720310812,6.16516799657479,8.24898847187562,2.98576729464223,4.29628689337247,3.78795340595653,4.81445638962004,2.29902104433473,4.68161537493908,4.21973489940002,7.96027040070536,4.09963904911519,4.77878795254617,6.98499100995342,7.32931175971664,6.42960672570586,6.68614271823006,6.35667624039967,7.22922847986555,7.3132954969655,4.93877127379064,4.97585667046233,2.1066395619397,1.80143534980301,1.70498099637356,3.93538967817454,3.75241695969754,4.14142741360334,9.70653415899362,4.72234156193769,4.78228049950873,5.34828072925938,3.48755421819505,5.13767506415546,6.08871444679878,5.41752631461014,5.6748166682099,4.9707995724613,4.61055242111206,4.69722465661301,5.88811855979556,8.23236899034275,1.32167513193519,1.58670339998127,4.69234151177515,6.50262681209228,5.54130083685001,4.43703754171354,3.55804870151792,3.61428689613862,2.84717436926707,2.9645811850322,3.01602250560323,4.17808591286417,3.31438948102504,3.59527763461689,0.432276099749388,1.99141273254367,2.84501851429623,5.36968009265725,5.63538678365402,5.49858585182348,4.65485969202302,5.19005067188357,5.24863258131335,2.36176236767363,3.1399745568275,3.45512058981041,1.77871576252289,3.17005700860579,2.55526693647164,2.47348323623339,1.82574109249653,1.9294172780193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|EntrezGene=19377
|HGNC=
|UniProt=Q61818,Q810L5
|association_with_transcript=2bp_to_ENSMUST00000064190,ENSMUST00000149770,NM_009021,uc007jfk.1,uc011xvq.1_5end
|description=CAGE_peak_3_at_Rai1_5end
|id=chr11:59918517..59918537,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.08e-11!94;UBERON:0007811!8.10e-10!86;UBERON:0001004!5.49e-09!42;UBERON:0003408!6.08e-09!24;UBERON:0000065!8.47e-09!41;UBERON:0002370!8.69e-09!23;UBERON:0000974!8.69e-09!23;UBERON:0004807!8.69e-09!23;UBERON:0005058!8.69e-09!23;UBERON:0003351!8.69e-09!23;UBERON:0009113!8.69e-09!23;UBERON:0003295!8.69e-09!23;UBERON:0009722!8.69e-09!23;UBERON:0005562!8.69e-09!23;UBERON:0007690!8.69e-09!23;UBERON:0006562!4.61e-08!24;UBERON:0001557!4.61e-08!24;UBERON:0001042!4.61e-08!24;UBERON:0008814!4.61e-08!24;UBERON:0009145!4.61e-08!24;UBERON:0000479!2.54e-07!349;UBERON:0000468!8.14e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001004,4.99e-09,42;UBERON:0003408,5.38e-09,24;UBERON:0002370,7.69e-09,23;UBERON:0000974,7.69e-09,23;UBERON:0004807,7.69e-09,23;UBERON:0005058,7.69e-09,23;UBERON:0003351,7.69e-09,23;UBERON:0009113,7.69e-09,23;UBERON:0003295,7.69e-09,23;UBERON:0009722,7.69e-09,23;UBERON:0005562,7.69e-09,23;UBERON:0007690,7.69e-09,23;UBERON:0000065,7.70e-09,41;UBERON:0000153,1.89e-08,43;UBERON:0006562,4.11e-08,24;UBERON:0001557,4.11e-08,24;UBERON:0001042,4.11e-08,24;UBERON:0008814,4.11e-08,24;UBERON:0009145,4.11e-08,24;UBERON:0000479,2.58e-07,349
|phase1_expression=2.24208385946712,0,0.909998478779072,0.30246421130683,1.50268718983904,1.51091344720701,1.63528848416868,7.10178278928669,9.01047821770667,11.0010327371337,5.65019295144166,6.94017783259427,7.19043065711064,6.29426897416781,0.666219523631325,1.21485160433896,3.49780939064073,3.47008381894061,1.7824876368746,2.97072756258621,3.99703463710028,2.6808556824239,2.87319768052829,1.27993938234725,0,0.57423196411502,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,1.33038306393183,3.17515336729816,3.07532393792285,0,2.02196133825892,1.82858109894342,1.22501613757421,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,0,4.28049181116963,3.85232338634155,4.9557623083654,3.12956537739216,1.30815093828268,4.39372365468944,4.6663175777828,1.81982348112971,4.31257693094915,1.51004345451963,10.1550699881588,9.41062637598899,2.57259436035947,3.43840127926508,2.06268836910977,4.45096213891115,3.70293685490423,6.33831403506179,2.37191172448392,3.55717918444456,2.2497492932035,3.9554654502679,1.4209602298922,2.99600110518405,3.84218305321555,6.84351441235953,6.07526722492608,7.57169860864975,4.85606673486466,2.65042249141936,4.28717797252339,4.79227355091182,6.43453150627015,2.20231761998777,6.12899222808901,3.99376986466233,5.27545150920775,6.22115976496386,4.68822033501084,1.67509799400829,3.93933827022176,4.5839474333043,5.30331453852602,4.8406371471695,6.33758115806022,3.93776205332557,1.5870027622425,7.53647670624362,4.30211938490693,3.39985666853875,1.07940638327563,0.649776417447669,0.896053774194671,1.54488862144927,1.53387290320252,1.29893002301434,0.70667914902068,1.40843419776681,2.56652954828636,0,7.11066703153331,3.46385665617943,1.26679932737549,3.0331466700887,1.59857431606684,3.36619248741323,5.34391700633369,3.64319186208885,5.1759131313064,3.45923245884088,3.46662073271032,6.11461277105665,3.01599819191221,0.988779870937496,5.35017620603673,0.884610551949874,4.69123864847487,5.96272099843063,3.39412677194655,0,8.78342391034641,5.44561437714983,1.27728527604296,2.87556298814209,0,1.27070227073065,5.99162557619291,8.23501085073528,6.78533501409468,6.25767552692195,7.41574826257959,5.61027720310812,6.16516799657479,8.24898847187562,2.98576729464223,4.29628689337247,3.78795340595653,4.81445638962004,2.29902104433473,4.68161537493908,4.21973489940002,7.96027040070536,4.09963904911519,4.77878795254617,6.98499100995342,7.32931175971664,6.42960672570586,6.68614271823006,6.35667624039967,7.22922847986555,7.3132954969655,4.93877127379064,4.97585667046233,2.1066395619397,1.80143534980301,1.70498099637356,3.93538967817454,3.75241695969754,4.14142741360334,9.70653415899362,4.72234156193769,4.78228049950873,5.34828072925938,3.48755421819505,5.13767506415546,6.08871444679878,5.41752631461014,5.6748166682099,4.9707995724613,4.61055242111206,4.69722465661301,5.88811855979556,8.23236899034275,1.32167513193519,1.58670339998127,4.69234151177515,6.50262681209228,5.54130083685001,4.43703754171354,3.55804870151792,3.61428689613862,2.84717436926707,2.9645811850322,3.01602250560323,4.17808591286417,3.31438948102504,3.59527763461689,0.432276099749388,1.99141273254367,2.84501851429623,5.36968009265725,5.63538678365402,5.49858585182348,4.65485969202302,5.19005067188357,5.24863258131335,2.36176236767363,3.1399745568275,3.45512058981041,1.77871576252289,3.17005700860579,2.55526693647164,2.47348323623339,1.82574109249653,1.92941727801933,1.2731292589071,2.5892652370573,2.2698931748505,1.64736847912849,4.31304619582064,4.46569137202204,1.24815069245824,2.27320990152401,1.4351793081753,1.4473305640901,4.80358294433172,4.16881105895066,7.00749398700711,4.75286240170527,7.74477819352057,7.20276906999808,4.99891645860629,5.85400943573396,7.56648691709717,7.75126413770712,8.13219320153184,3.60499292374624,4.66249451037918,6.50920763616802,1.50791283939272,1.08781136763742,4.91764273019036,7.72622889653251,3.85321415970701,4.92289083687253,1.3114795630134,2.27223834483936,4.41711507182759,4.29482618726302,7.75524231838076,6.93009514062401,6.46116154838943,5.37845408498782,4.04810701674894,4.38383786866968,3.95287777946523,8.03303291054518,6.81312408999689,6.58842733568844,9.12166972380026,8.90838664051691,0,5.58395463156457,4.23252979750651,3.58349651536206,2.95301892880773,3.07435147943927,3.6179961043551,4.36240475373007,5.70395805415554,3.16036757935816,3.16255825724996,1.03135543248187,3.40439605753788,3.06103859853227,4.78627129996192,2.57204442037911,3.01478397191865,3.0322698992352,2.46823530903181,2.13125464380219,2.11204537257339,2.75381692122966,2.8668691747145,7.58476763530808,7.75029248140347,4.58378229453985,3.34242563208782,4.26766339337159,3.78925087618806,3.8939313422207,2.22132145037209,6.60437977482312,3.1483069652851,2.0720530270516,1.36694227721025,1.60144721244566,2.54967644990783,2.79902904647316,2.9021994498929,3.81868247206045,8.06656783631895,7.72613975082025,4.42821897369385,5.64538399239065,3.71216358368502,5.52943820177765,7.02554373665355,3.40282724579238,2.72191443912765,5.59205381778233,1.12738587736838,7.027277664067,4.79829622325583,6.80579159204167,5.42471258606471,6.9272011451219,8.9191501370773,6.90083239672936,6.08184197669123,2.17425708743405,0.864090018773596,13.9044893076398,4.86540516696394,5.03283690107653,5.3267537420896,10.2045216530464,8.94066096515692,12.0195449519969,8.4183030489509,10.6014772445555,15.54618855762,13.914013548884,14.6186821109629,11.1605736302782,16.8302739141459,2.49403421976732,1.33191572024439,0.717710852875806,0.839423081820392,7.53439416725543,1.87682475451182,4.2124873581471,3.21552568618599,2.00628841614145,7.90652579663893,5.52390283808612,6.87474616127276,5.84300819968538,5.48066015816514,8.3093328712867,4.72515750162264,8.55610286126019,10.8754178156209,6.73088405277366,4.04770655578289,9.57659696162474,5.46347538413229,3.8897074730927,4.82110274044359,4.96377472815038,3.77819437262746,5.56294654545014,3.53011130550997,4.80124702351215,5.57654459758527,5.65879024158229,2.80924522409647,4.60981097315059,5.05432126809397,4.76293691283074,4.98302601562879,5.01563973205633,3.70877310722976,4.56316652416632,3.42869252385415,3.90446773550542,5.48403236878838,3.34296758254356,4.42314087952054,4.90764725771724,6.95126296916536,5.26139422875686,4.6173398707593,5.05028044491965,5.33857581558784,5.22073756590486,5.32000356120596,4.95797891795091,6.75173138433995,6.24526444844865,4.91256377735358,8.80971321598023,4.01705497344571,5.95596831622692,3.2461496986859
|short_description=p3@Rai1
}}

Revision as of 20:12, 12 September 2013

Short description:p3@Rai1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rai1_5end
Coexpression cluster:NA
Association with transcript: 2bp_to_ENSMUST00000064190, ENSMUST00000149770, NM_009021, uc007jfk.1, uc011xvq.1_5end
EntrezGene:Rai1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rai1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.94
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D75.34
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F54.69
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C64.81
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I64.97
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F87.01
lung, embryo E15.CNhs11020.432-17C54.75
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I49.12
oviduct, adult pregnant day01.CNhs10500.988-6G68.91
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C37.58
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A97.03
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I12.72
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.03
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B78.92
testis, neonate N07.CNhs11222.726-26I46.90
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B513.90
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C110.20
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F812.02
thymus, neonate N03.CNhs11137.2104-43C78.42
thymus, neonate N06.CNhs11197.681-26C410.60
thymus, neonate N07.CNhs11211.713-19D315.55
thymus, neonate N10.CNhs11194.748-24E413.91
thymus, neonate N20.CNhs11186.820-7A214.62
thymus, neonate N25.CNhs11125.1362-25G711.16
thymus, neonate N30.CNhs11132.1393-42G216.83
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C99.58
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B43.25





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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