FFCP PHASE1:Mm9::chr11:52079248..52079254,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=40|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:52079248..52079254,+|id=chr11:52079248..52079254,+|ontology_enrichment_celltype=CL:0000084!2.30e-30!11;CL:0000827!2.30e-30!11;CL:0000838!1.10e-27!12;CL:0000542!2.03e-25!13;CL:0000051!2.03e-25!13;CL:0000791!1.64e-24!9;CL:0000789!1.64e-24!9;CL:0002420!1.64e-24!9;CL:0002419!1.64e-24!9;CL:0000790!1.64e-24!9;CL:0000624!3.02e-21!8;CL:0000738!5.16e-19!17;CL:0002087!5.16e-19!17;CL:0000893!1.15e-14!6;CL:0002489!1.15e-14!6;CL:0000898!1.15e-14!6;CL:0000809!1.15e-14!6;CL:0000810!1.15e-14!6;CL:0000895!1.15e-14!6;CL:0000808!1.15e-14!6;CL:0000894!1.15e-14!6;CL:0000806!1.15e-14!6;CL:0000807!1.15e-14!6;CL:0000805!1.15e-14!6;CL:0002425!1.15e-14!6;CL:0002436!1.15e-14!6;CL:0002427!1.15e-14!6;CL:0002428!1.15e-14!6;CL:0002429!1.15e-14!6;CL:0002433!1.15e-14!6;CL:0002431!1.15e-14!6;CL:0002432!1.15e-14!6;CL:0002031!2.40e-12!25;CL:0000988!3.00e-09!32;CL:0002032!3.00e-09!32;CL:0000037!3.00e-09!32;CL:0000566!3.00e-09!32;CL:0000837!3.00e-09!32|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000893,6.93e-27,6;CL:0002489,6.93e-27,6;CL:0000898,6.93e-27,6;CL:0000809,6.93e-27,6;CL:0000810,6.93e-27,6;CL:0000895,6.93e-27,6;CL:0000808,6.93e-27,6;CL:0000894,6.93e-27,6;CL:0000806,6.93e-27,6;CL:0000807,6.93e-27,6;CL:0000805,6.93e-27,6;CL:0002425,6.93e-27,6;CL:0002436,6.93e-27,6;CL:0002427,6.93e-27,6;CL:0002428,6.93e-27,6;CL:0002429,6.93e-27,6;CL:0002433,6.93e-27,6;CL:0002431,6.93e-27,6;CL:0002432,6.93e-27,6;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.51e-34!23;UBERON:0000974!1.51e-34!23;UBERON:0004807!1.51e-34!23;UBERON:0005058!1.51e-34!23;UBERON:0003351!1.51e-34!23;UBERON:0009113!1.51e-34!23;UBERON:0003295!1.51e-34!23;UBERON:0009722!1.51e-34!23;UBERON:0005562!1.51e-34!23;UBERON:0007690!1.51e-34!23;UBERON:0006562!5.61e-33!24;UBERON:0003408!5.61e-33!24;UBERON:0001557!5.61e-33!24;UBERON:0001042!5.61e-33!24;UBERON:0008814!5.61e-33!24;UBERON:0009145!5.61e-33!24;UBERON:0004177!2.40e-30!29;UBERON:0000072!5.80e-29!27;UBERON:0000063!1.34e-24!35;UBERON:0000065!5.48e-23!41;UBERON:0001004!2.35e-22!42;UBERON:0002390!2.34e-18!45;UBERON:0003061!2.34e-18!45;UBERON:0002193!5.36e-17!48;UBERON:0005057!8.49e-16!51;UBERON:0003929!1.36e-12!55;UBERON:0005911!3.27e-12!69;UBERON:0002368!2.82e-11!60;UBERON:0002405!1.38e-10!70;UBERON:0002530!3.66e-10!65;UBERON:0000490!5.83e-10!66;UBERON:0001041!1.97e-09!92;UBERON:0000949!7.25e-09!72;UBERON:0000077!9.43e-09!97;UBERON:0003081!9.92e-08!88;UBERON:0000064!1.69e-07!99;UBERON:0007811!6.56e-07!86;UBERON:0004921!9.46e-07!126;UBERON:0004185!9.46e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46;UBERON:0002370,1.24e-07,23;UBERON:0000974,1.24e-07,23;UBERON:0004807,1.24e-07,23;UBERON:0005058,1.24e-07,23;UBERON:0003351,1.24e-07,23;UBERON:0009113,1.24e-07,23;UBERON:0003295,1.24e-07,23;UBERON:0009722,1.24e-07,23;UBERON:0005562,1.24e-07,23;UBERON:0007690,1.24e-07,23;UBERON:0006562,2.41e-07,24;UBERON:0003408,2.41e-07,24;UBERON:0001557,2.41e-07,24;UBERON:0001042,2.41e-07,24;UBERON:0008814,2.41e-07,24;UBERON:0009145,2.41e-07,24|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.422366166455,1.87251621057595,0,0.159544317990673,4.62241970814255,2.36035086531293,0,0,0,0,0,0,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0,0.304827226619999,0.201652370273681,0.584747284438515,0.192423683280659,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:52079248..52079254,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:52079248..52079254,+ | |||
|id=chr11:52079248..52079254,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.30e-30!11;CL:0000827!2.30e-30!11;CL:0000838!1.10e-27!12;CL:0000542!2.03e-25!13;CL:0000051!2.03e-25!13;CL:0000791!1.64e-24!9;CL:0000789!1.64e-24!9;CL:0002420!1.64e-24!9;CL:0002419!1.64e-24!9;CL:0000790!1.64e-24!9;CL:0000624!3.02e-21!8;CL:0000738!5.16e-19!17;CL:0002087!5.16e-19!17;CL:0000893!1.15e-14!6;CL:0002489!1.15e-14!6;CL:0000898!1.15e-14!6;CL:0000809!1.15e-14!6;CL:0000810!1.15e-14!6;CL:0000895!1.15e-14!6;CL:0000808!1.15e-14!6;CL:0000894!1.15e-14!6;CL:0000806!1.15e-14!6;CL:0000807!1.15e-14!6;CL:0000805!1.15e-14!6;CL:0002425!1.15e-14!6;CL:0002436!1.15e-14!6;CL:0002427!1.15e-14!6;CL:0002428!1.15e-14!6;CL:0002429!1.15e-14!6;CL:0002433!1.15e-14!6;CL:0002431!1.15e-14!6;CL:0002432!1.15e-14!6;CL:0002031!2.40e-12!25;CL:0000988!3.00e-09!32;CL:0002032!3.00e-09!32;CL:0000037!3.00e-09!32;CL:0000566!3.00e-09!32;CL:0000837!3.00e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.66e-54,8;CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000893,6.93e-27,6;CL:0002489,6.93e-27,6;CL:0000898,6.93e-27,6;CL:0000809,6.93e-27,6;CL:0000810,6.93e-27,6;CL:0000895,6.93e-27,6;CL:0000808,6.93e-27,6;CL:0000894,6.93e-27,6;CL:0000806,6.93e-27,6;CL:0000807,6.93e-27,6;CL:0000805,6.93e-27,6;CL:0002425,6.93e-27,6;CL:0002436,6.93e-27,6;CL:0002427,6.93e-27,6;CL:0002428,6.93e-27,6;CL:0002429,6.93e-27,6;CL:0002433,6.93e-27,6;CL:0002431,6.93e-27,6;CL:0002432,6.93e-27,6;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.51e-34!23;UBERON:0000974!1.51e-34!23;UBERON:0004807!1.51e-34!23;UBERON:0005058!1.51e-34!23;UBERON:0003351!1.51e-34!23;UBERON:0009113!1.51e-34!23;UBERON:0003295!1.51e-34!23;UBERON:0009722!1.51e-34!23;UBERON:0005562!1.51e-34!23;UBERON:0007690!1.51e-34!23;UBERON:0006562!5.61e-33!24;UBERON:0003408!5.61e-33!24;UBERON:0001557!5.61e-33!24;UBERON:0001042!5.61e-33!24;UBERON:0008814!5.61e-33!24;UBERON:0009145!5.61e-33!24;UBERON:0004177!2.40e-30!29;UBERON:0000072!5.80e-29!27;UBERON:0000063!1.34e-24!35;UBERON:0000065!5.48e-23!41;UBERON:0001004!2.35e-22!42;UBERON:0002390!2.34e-18!45;UBERON:0003061!2.34e-18!45;UBERON:0002193!5.36e-17!48;UBERON:0005057!8.49e-16!51;UBERON:0003929!1.36e-12!55;UBERON:0005911!3.27e-12!69;UBERON:0002368!2.82e-11!60;UBERON:0002405!1.38e-10!70;UBERON:0002530!3.66e-10!65;UBERON:0000490!5.83e-10!66;UBERON:0001041!1.97e-09!92;UBERON:0000949!7.25e-09!72;UBERON:0000077!9.43e-09!97;UBERON:0003081!9.92e-08!88;UBERON:0000064!1.69e-07!99;UBERON:0007811!6.56e-07!86;UBERON:0004921!9.46e-07!126;UBERON:0004185!9.46e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46;UBERON:0002370,1.24e-07,23;UBERON:0000974,1.24e-07,23;UBERON:0004807,1.24e-07,23;UBERON:0005058,1.24e-07,23;UBERON:0003351,1.24e-07,23;UBERON:0009113,1.24e-07,23;UBERON:0003295,1.24e-07,23;UBERON:0009722,1.24e-07,23;UBERON:0005562,1.24e-07,23;UBERON:0007690,1.24e-07,23;UBERON:0006562,2.41e-07,24;UBERON:0003408,2.41e-07,24;UBERON:0001557,2.41e-07,24;UBERON:0001042,2.41e-07,24;UBERON:0008814,2.41e-07,24;UBERON:0009145,2.41e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,1.67860320474049,0.422366166455,1.87251621057595,0,0.159544317990673,4.62241970814255,2.36035086531293,0,0,0,0,0,0,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0,0.304827226619999,0.201652370273681,0.584747284438515,0.192423683280659,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:52079248..52079254,+ | |||
}} |
Revision as of 19:54, 12 September 2013
Short description: | p@chr11:52079248..52079254, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:52079248..52079254, + |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.29e-10 | 46 |
thymus | 1.24e-07 | 23 |
neck | 1.24e-07 | 23 |
respiratory system epithelium | 1.24e-07 | 23 |
hemolymphoid system gland | 1.24e-07 | 23 |
pharyngeal epithelium | 1.24e-07 | 23 |
thymic region | 1.24e-07 | 23 |
pharyngeal gland | 1.24e-07 | 23 |
entire pharyngeal arch endoderm | 1.24e-07 | 23 |
thymus primordium | 1.24e-07 | 23 |
early pharyngeal endoderm | 1.24e-07 | 23 |
pharynx | 2.41e-07 | 24 |
gland of gut | 2.41e-07 | 24 |
upper respiratory tract | 2.41e-07 | 24 |
chordate pharynx | 2.41e-07 | 24 |
pharyngeal arch system | 2.41e-07 | 24 |
pharyngeal region of foregut | 2.41e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.