FFCP PHASE1:Mm9::chr11:41813770..41813781,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14406|HGNC=|MCL_coexpression_id=1|UniProt=Q8C8H5|association_with_transcript=11bp_to_ENSMUST00000163704_5end|description=CAGE_peak_6_at_Gabrg2_5end|id=chr11:41813770..41813781,-|ontology_enrichment_celltype=CL:0000117!7.02e-09!23;CL:0000337!7.02e-09!23;CL:0000540!4.24e-07!33;CL:0000047!4.24e-07!33;CL:0000031!4.24e-07!33;CL:0000404!4.24e-07!33|ontology_enrichment_celltype_v019_2=CL:0002614,1.36e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.88e-31!52;UBERON:0005068!8.88e-31!52;UBERON:0006241!8.88e-31!52;UBERON:0007135!8.88e-31!52;UBERON:0001017!5.16e-28!73;UBERON:0005743!5.16e-28!73;UBERON:0000955!1.94e-27!50;UBERON:0006238!1.94e-27!50;UBERON:0000073!6.08e-27!75;UBERON:0001016!6.08e-27!75;UBERON:0002616!4.64e-26!49;UBERON:0002346!3.33e-25!71;UBERON:0003075!3.33e-25!71;UBERON:0007284!3.33e-25!71;UBERON:0002020!1.20e-24!34;UBERON:0000033!5.90e-24!63;UBERON:0003080!1.64e-20!40;UBERON:0004121!7.01e-20!102;UBERON:0000924!7.01e-20!102;UBERON:0006601!7.01e-20!102;UBERON:0003056!1.77e-19!49;UBERON:0002791!1.86e-19!29;UBERON:0003528!1.86e-19!29;UBERON:0001893!1.86e-19!29;UBERON:0002780!3.52e-19!39;UBERON:0001890!3.52e-19!39;UBERON:0006240!3.52e-19!39;UBERON:0002021!3.75e-16!10;UBERON:0000411!3.75e-16!10;UBERON:0001950!3.75e-16!10;UBERON:0007811!1.00e-14!86;UBERON:0000153!1.33e-12!94;UBERON:0000956!1.79e-12!21;UBERON:0001869!1.79e-12!21;UBERON:0000203!1.79e-12!21;UBERON:0002619!3.26e-12!17;UBERON:0003076!7.58e-11!12;UBERON:0003057!7.58e-11!12;UBERON:0002298!5.24e-10!6;UBERON:0000025!1.83e-08!114;UBERON:0002420!2.11e-08!8;UBERON:0007245!2.11e-08!8;UBERON:0010009!2.11e-08!8;UBERON:0010011!2.11e-08!8;UBERON:0000454!2.11e-08!8;UBERON:0002240!6.28e-08!6;UBERON:0005174!6.28e-08!6;UBERON:0001137!6.28e-08!6;UBERON:0004111!2.68e-07!122;UBERON:0002950!4.28e-07!4;UBERON:0001891!4.28e-07!4;UBERON:0009616!4.28e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.79e-34,47;UBERON:0006238,2.79e-34,47;UBERON:0000073,5.66e-32,54;UBERON:0002616,6.72e-32,46;UBERON:0002021,6.38e-31,10;UBERON:0000411,6.38e-31,10;UBERON:0001950,6.38e-31,10;UBERON:0001049,1.80e-30,52;UBERON:0005068,1.80e-30,52;UBERON:0006241,1.80e-30,52;UBERON:0007135,1.80e-30,52;UBERON:0001017,6.63e-27,73;UBERON:0001016,4.66e-26,75;UBERON:0003528,1.29e-24,29;UBERON:0002791,1.29e-24,29;UBERON:0001893,1.29e-24,29;UBERON:0003080,1.29e-24,40;UBERON:0002346,6.80e-24,64;UBERON:0003075,6.80e-24,64;UBERON:0007284,6.80e-24,64;UBERON:0002780,2.17e-22,39;UBERON:0001890,2.17e-22,39;UBERON:0006240,2.17e-22,39;UBERON:0002619,3.80e-21,17;UBERON:0002020,1.65e-20,34;UBERON:0010371,2.25e-20,73;UBERON:0000956,7.58e-20,21;UBERON:0001869,7.58e-20,21;UBERON:0000203,7.58e-20,21;UBERON:0004121,1.53e-19,95;UBERON:0000924,1.53e-19,95;UBERON:0006601,1.53e-19,95;UBERON:0003056,2.25e-19,49;UBERON:0010314,3.39e-15,92;UBERON:0002950,1.09e-12,4;UBERON:0001891,1.09e-12,4;UBERON:0009616,1.09e-12,4;UBERON:0010286,1.09e-12,4;UBERON:0000025,2.39e-11,114;UBERON:0004111,2.73e-10,122;UBERON:0002038,1.36e-09,3;UBERON:0009663,1.36e-09,3;UBERON:0009661,1.36e-09,3;UBERON:0000125,1.36e-09,3;UBERON:0002308,1.36e-09,3;UBERON:0004733,1.32e-08,6;UBERON:0004732,1.32e-08,6;UBERON:0002028,1.32e-08,6;UBERON:0007277,1.32e-08,6;UBERON:0001896,1.81e-07,2;UBERON:0002298,1.81e-07,2;UBERON:0005290,1.81e-07,2;UBERON:0010096,1.81e-07,2;UBERON:0011216,5.82e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,2.68143409978894,3.84016333140609,0,0.182975287204819,0.52091337055676,2.23346399201105,3.37657566019008,1.37518422999129,0.589257170947335,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,3.35114730901528,0,0,0,0,4.34392854273986,1.37250180845588,0.502617408451458,2.43354048269187,2.81287003063364,2.70124457927428,2.10913641988085,0,0,0,0,0,0,0,0,0.136072998302656,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.8679856575427,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,3.22227665555024,4.58316410751517,2.92150409984269,4.11049511862385,1.5107877947794,4.72515750162264,4.5032120322422,4.98456649882625,2.07104124700728,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0.17230640686684,0,0.231768651889711,0,0,0.147198920134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| ||
|EntrezGene=14406 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8C8H5 | |||
|association_with_transcript=11bp_to_ENSMUST00000163704_5end | |||
|description=CAGE_peak_6_at_Gabrg2_5end | |||
|id=chr11:41813770..41813781,- | |||
|ontology_enrichment_celltype=CL:0000117!7.02e-09!23;CL:0000337!7.02e-09!23;CL:0000540!4.24e-07!33;CL:0000047!4.24e-07!33;CL:0000031!4.24e-07!33;CL:0000404!4.24e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.36e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.88e-31!52;UBERON:0005068!8.88e-31!52;UBERON:0006241!8.88e-31!52;UBERON:0007135!8.88e-31!52;UBERON:0001017!5.16e-28!73;UBERON:0005743!5.16e-28!73;UBERON:0000955!1.94e-27!50;UBERON:0006238!1.94e-27!50;UBERON:0000073!6.08e-27!75;UBERON:0001016!6.08e-27!75;UBERON:0002616!4.64e-26!49;UBERON:0002346!3.33e-25!71;UBERON:0003075!3.33e-25!71;UBERON:0007284!3.33e-25!71;UBERON:0002020!1.20e-24!34;UBERON:0000033!5.90e-24!63;UBERON:0003080!1.64e-20!40;UBERON:0004121!7.01e-20!102;UBERON:0000924!7.01e-20!102;UBERON:0006601!7.01e-20!102;UBERON:0003056!1.77e-19!49;UBERON:0002791!1.86e-19!29;UBERON:0003528!1.86e-19!29;UBERON:0001893!1.86e-19!29;UBERON:0002780!3.52e-19!39;UBERON:0001890!3.52e-19!39;UBERON:0006240!3.52e-19!39;UBERON:0002021!3.75e-16!10;UBERON:0000411!3.75e-16!10;UBERON:0001950!3.75e-16!10;UBERON:0007811!1.00e-14!86;UBERON:0000153!1.33e-12!94;UBERON:0000956!1.79e-12!21;UBERON:0001869!1.79e-12!21;UBERON:0000203!1.79e-12!21;UBERON:0002619!3.26e-12!17;UBERON:0003076!7.58e-11!12;UBERON:0003057!7.58e-11!12;UBERON:0002298!5.24e-10!6;UBERON:0000025!1.83e-08!114;UBERON:0002420!2.11e-08!8;UBERON:0007245!2.11e-08!8;UBERON:0010009!2.11e-08!8;UBERON:0010011!2.11e-08!8;UBERON:0000454!2.11e-08!8;UBERON:0002240!6.28e-08!6;UBERON:0005174!6.28e-08!6;UBERON:0001137!6.28e-08!6;UBERON:0004111!2.68e-07!122;UBERON:0002950!4.28e-07!4;UBERON:0001891!4.28e-07!4;UBERON:0009616!4.28e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.79e-34,47;UBERON:0006238,2.79e-34,47;UBERON:0000073,5.66e-32,54;UBERON:0002616,6.72e-32,46;UBERON:0002021,6.38e-31,10;UBERON:0000411,6.38e-31,10;UBERON:0001950,6.38e-31,10;UBERON:0001049,1.80e-30,52;UBERON:0005068,1.80e-30,52;UBERON:0006241,1.80e-30,52;UBERON:0007135,1.80e-30,52;UBERON:0001017,6.63e-27,73;UBERON:0001016,4.66e-26,75;UBERON:0003528,1.29e-24,29;UBERON:0002791,1.29e-24,29;UBERON:0001893,1.29e-24,29;UBERON:0003080,1.29e-24,40;UBERON:0002346,6.80e-24,64;UBERON:0003075,6.80e-24,64;UBERON:0007284,6.80e-24,64;UBERON:0002780,2.17e-22,39;UBERON:0001890,2.17e-22,39;UBERON:0006240,2.17e-22,39;UBERON:0002619,3.80e-21,17;UBERON:0002020,1.65e-20,34;UBERON:0010371,2.25e-20,73;UBERON:0000956,7.58e-20,21;UBERON:0001869,7.58e-20,21;UBERON:0000203,7.58e-20,21;UBERON:0004121,1.53e-19,95;UBERON:0000924,1.53e-19,95;UBERON:0006601,1.53e-19,95;UBERON:0003056,2.25e-19,49;UBERON:0010314,3.39e-15,92;UBERON:0002950,1.09e-12,4;UBERON:0001891,1.09e-12,4;UBERON:0009616,1.09e-12,4;UBERON:0010286,1.09e-12,4;UBERON:0000025,2.39e-11,114;UBERON:0004111,2.73e-10,122;UBERON:0002038,1.36e-09,3;UBERON:0009663,1.36e-09,3;UBERON:0009661,1.36e-09,3;UBERON:0000125,1.36e-09,3;UBERON:0002308,1.36e-09,3;UBERON:0004733,1.32e-08,6;UBERON:0004732,1.32e-08,6;UBERON:0002028,1.32e-08,6;UBERON:0007277,1.32e-08,6;UBERON:0001896,1.81e-07,2;UBERON:0002298,1.81e-07,2;UBERON:0005290,1.81e-07,2;UBERON:0010096,1.81e-07,2;UBERON:0011216,5.82e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,2.68143409978894,3.84016333140609,0,0.182975287204819,0.52091337055676,2.23346399201105,3.37657566019008,1.37518422999129,0.589257170947335,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,3.35114730901528,0,0,0,0,4.34392854273986,1.37250180845588,0.502617408451458,2.43354048269187,2.81287003063364,2.70124457927428,2.10913641988085,0,0,0,0,0,0,0,0,0.136072998302656,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.8679856575427,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,3.22227665555024,4.58316410751517,2.92150409984269,4.11049511862385,1.5107877947794,4.72515750162264,4.5032120322422,4.98456649882625,2.07104124700728,0,0,0.170733605754134,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0,0,0.476872379894642,0.436039249896986,0.282328141245992,0,0.365855945745545,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p6@Gabrg2 | |||
}} |
Revision as of 19:38, 12 September 2013
Short description: | p6@Gabrg2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gabrg2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000163704_5end |
EntrezGene: | Gabrg2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.36e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.