FFCP PHASE1:Hg19::chr2:7006016..7006066,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=129607|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27015|TSSclassifier=S|UniProt=Q5EBM0|association_with_transcript=-80bp_to_ENST00000458098,NM_207315,uc002qyo.2,uc010ewv.2,uc010yis.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_5_at_CMPK2_5end|id=chr2:7006016..7006066,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;8.72e-18;1!CL:0000764;1.44e-09;2!CL:0000558;1.44e-09;2|ontology_enrichment_celltype_v019_2=CL:0002591,7.37e-18,1;CL:0000764,1.57e-09,2;CL:0000765,1.57e-09,2;CL:0000050,1.57e-09,2;CL:0000038,1.57e-09,2;CL:0000558,1.57e-09,2;CL:0000547,1.57e-09,2;CL:0000549,1.57e-09,2;CL:0000550,1.57e-09,2;CL:0000552,1.57e-09,2|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.40e-15!57;UBERON:0005068!6.40e-15!57;UBERON:0006241!6.40e-15!57;UBERON:0007135!6.40e-15!57;UBERON:0007023!9.61e-15!115;UBERON:0000073!3.40e-14!94;UBERON:0001016!3.40e-14!94;UBERON:0002780!5.42e-14!41;UBERON:0001890!5.42e-14!41;UBERON:0006240!5.42e-14!41;UBERON:0003080!1.92e-13!42;UBERON:0005743!4.22e-13!86;UBERON:0002616!4.32e-13!59;UBERON:0002020!6.03e-13!34;UBERON:0003528!6.03e-13!34;UBERON:0000955!7.61e-13!69;UBERON:0006238!7.61e-13!69;UBERON:0001869!8.58e-13!32;UBERON:0001893!9.01e-13!34;UBERON:0001017!1.51e-12!82;UBERON:0002619!1.82e-12!22;UBERON:0002791!5.31e-12!33;UBERON:0001950!5.12e-11!20;UBERON:0003075!6.10e-11!86;UBERON:0007284!6.10e-11!86;UBERON:0000956!2.51e-10!25;UBERON:0000203!2.51e-10!25;UBERON:0002346!6.60e-10!90;UBERON:0000153!4.42e-09!129;UBERON:0007811!4.42e-09!129;UBERON:0003056!8.04e-09!61;UBERON:0000033!1.76e-07!123|ontology_enrichment_uberon_v019=UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2!UBERON:0000473;1.98e-09;8!UBERON:0003135;4.30e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.33e-09,2;UBERON:0007497,1.33e-09,2;UBERON:0003643,1.33e-09,2;UBERON:0003504,1.33e-09,2;UBERON:0003469,1.33e-09,2;UBERON:0003496,1.33e-09,2;UBERON:0002012,1.33e-09,2;UBERON:0008886,1.33e-09,2;UBERON:0007303,1.33e-09,2;UBERON:0002061,1.33e-09,2;UBERON:0005432,1.33e-09,2;UBERON:0004363,1.33e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0004145,8.15e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0.309868802321207,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0.989553900560148,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.414656231081544,0.432359860250884,0.37872730027914,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.509752546090077,0,0,0.219259876645935,1.0457418040996,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.267096106940212,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0.166849141711909,0,0,1.23087398947712,0.811367035427949,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0.1137934482855,0,0.23638768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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=129607 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27015 | |||
|TSSclassifier=S | |||
|UniProt=Q5EBM0 | |||
|association_with_transcript=-80bp_to_ENST00000458098,NM_207315,uc002qyo.2,uc010ewv.2,uc010yis.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_5_at_CMPK2_5end | |||
|id=chr2:7006016..7006066,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;8.72e-18;1!CL:0000764;1.44e-09;2!CL:0000558;1.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.37e-18,1;CL:0000764,1.57e-09,2;CL:0000765,1.57e-09,2;CL:0000050,1.57e-09,2;CL:0000038,1.57e-09,2;CL:0000558,1.57e-09,2;CL:0000547,1.57e-09,2;CL:0000549,1.57e-09,2;CL:0000550,1.57e-09,2;CL:0000552,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-07;10!UBERON:0005564;1.02e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.40e-15!57;UBERON:0005068!6.40e-15!57;UBERON:0006241!6.40e-15!57;UBERON:0007135!6.40e-15!57;UBERON:0007023!9.61e-15!115;UBERON:0000073!3.40e-14!94;UBERON:0001016!3.40e-14!94;UBERON:0002780!5.42e-14!41;UBERON:0001890!5.42e-14!41;UBERON:0006240!5.42e-14!41;UBERON:0003080!1.92e-13!42;UBERON:0005743!4.22e-13!86;UBERON:0002616!4.32e-13!59;UBERON:0002020!6.03e-13!34;UBERON:0003528!6.03e-13!34;UBERON:0000955!7.61e-13!69;UBERON:0006238!7.61e-13!69;UBERON:0001869!8.58e-13!32;UBERON:0001893!9.01e-13!34;UBERON:0001017!1.51e-12!82;UBERON:0002619!1.82e-12!22;UBERON:0002791!5.31e-12!33;UBERON:0001950!5.12e-11!20;UBERON:0003075!6.10e-11!86;UBERON:0007284!6.10e-11!86;UBERON:0000956!2.51e-10!25;UBERON:0000203!2.51e-10!25;UBERON:0002346!6.60e-10!90;UBERON:0000153!4.42e-09!129;UBERON:0007811!4.42e-09!129;UBERON:0003056!8.04e-09!61;UBERON:0000033!1.76e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2!UBERON:0000473;1.98e-09;8!UBERON:0003135;4.30e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.33e-09,2;UBERON:0007497,1.33e-09,2;UBERON:0003643,1.33e-09,2;UBERON:0003504,1.33e-09,2;UBERON:0003469,1.33e-09,2;UBERON:0003496,1.33e-09,2;UBERON:0002012,1.33e-09,2;UBERON:0008886,1.33e-09,2;UBERON:0007303,1.33e-09,2;UBERON:0002061,1.33e-09,2;UBERON:0005432,1.33e-09,2;UBERON:0004363,1.33e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0004145,8.15e-07,3 | |||
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| |||
|short_description=p5@CMPK2 | |||
}} |
Revision as of 19:32, 12 September 2013
Short description: | p5@CMPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CMPK2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -80bp_to_ENST00000458098, NM_207315, uc002qyo.2, uc010ewv.2, uc010yis.1_5end |
EntrezGene: | CMPK2 |
HGNC: | 27015 |
UniProt: | Q5EBM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.37e-18 | 1 |
erythroid lineage cell | 1.57e-09 | 2 |
erythroblast | 1.57e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 1.57e-09 | 2 |
erythroid progenitor cell | 1.57e-09 | 2 |
reticulocyte | 1.57e-09 | 2 |
proerythroblast | 1.57e-09 | 2 |
basophilic erythroblast | 1.57e-09 | 2 |
polychromatophilic erythroblast | 1.57e-09 | 2 |
orthochromatic erythroblast | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.33e-09 | 2 |
developing epithelial placode | 1.33e-09 | 2 |
respiratory system arterial blood vessel | 1.33e-09 | 2 |
respiratory system blood vessel | 1.33e-09 | 2 |
respiratory system artery | 1.33e-09 | 2 |
head blood vessel | 1.33e-09 | 2 |
pulmonary artery | 1.33e-09 | 2 |
pulmonary vascular system | 1.33e-09 | 2 |
pharyngeal vasculature | 1.33e-09 | 2 |
truncus arteriosus | 1.33e-09 | 2 |
aortic sac | 1.33e-09 | 2 |
pharyngeal arch artery | 1.33e-09 | 2 |
testis | 1.99e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |
outflow tract | 8.15e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.