FFCP PHASE1:Hg19::chr2:38302543..38302557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1545|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=2597|TSSclassifier=S|UniProt=|association_with_transcript=-10bp_to_CU680174,JF432813_5end|description=CAGE_peak_7_at_CYP1B1_5end|id=chr2:38302543..38302557,-|ontology_enrichment_celltype=CL:0000188!4.47e-07!9|ontology_enrichment_celltype_v019=CL:0002334;2.05e-17;12!CL:0002579;1.71e-14;3!CL:0002580;9.07e-14;3!CL:0000153;4.72e-13;9!CL:0000447;4.72e-13;9!CL:0002549;9.49e-10;2!CL:0000327;1.06e-07;15!CL:0000138;1.62e-07;6!CL:0000214;1.65e-07;3!CL:0000499;2.64e-07;28!CL:0000135;4.42e-07;3!CL:0000388;4.42e-07;3!CL:0002564;5.22e-07;3!CL:0002590;5.22e-07;3|ontology_enrichment_celltype_v019_2=CL:0002334,2.67e-17,12;CL:0002579,2.48e-14,3;CL:0002580,6.39e-14,3;CL:0000153,4.69e-13,9;CL:0000447,4.69e-13,9;CL:0002549,3.68e-10,2;CL:0002320,5.91e-10,361;CL:0000134,1.11e-08,354;CL:0000048,6.47e-08,427;CL:0000327,1.06e-07,15;CL:0000723,1.08e-07,433;CL:0000214,1.60e-07,3;CL:0000058,1.64e-07,6;CL:0000138,1.64e-07,6;CL:0000034,2.10e-07,441;CL:0000499,2.63e-07,28;CL:0000219,2.98e-07,386;CL:0000057,3.13e-07,76;CL:0002590,3.70e-07,3;CL:0000135,4.43e-07,3;CL:0000388,4.43e-07,3;CL:0002564,7.17e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!5.52e-10!167;UBERON:0004765!9.03e-09!101;UBERON:0001434!9.03e-09!101;UBERON:0002384!6.97e-07!375|ontology_enrichment_uberon_v019=UBERON:0004457;3.38e-18;9!UBERON:0000042;3.38e-18;9!UBERON:0005284;1.55e-14;5!UBERON:0003688;2.26e-12;6!UBERON:0002358;2.26e-12;6!UBERON:0003684;2.26e-12;6!UBERON:0001178;2.26e-12;6!UBERON:0005629;9.49e-10;2!UBERON:0005358;9.49e-10;2!UBERON:0001886;9.49e-10;2!UBERON:0004086;9.49e-10;2!UBERON:0005282;9.49e-10;2!UBERON:0005281;9.49e-10;2!UBERON:0004905;1.17e-09;8!UBERON:0000982;1.17e-09;8!UBERON:0004770;1.17e-09;8!UBERON:0006915;1.65e-07;3!UBERON:0007616;1.65e-07;3!UBERON:0002217;1.65e-07;3!UBERON:0002018;1.65e-07;3!UBERON:0007846;4.42e-07;3!UBERON:0000043;4.42e-07;3!UBERON:0007845;4.42e-07;3!UBERON:0002242;5.22e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005284,4.86e-15,5;UBERON:0004457,1.85e-13,12;UBERON:0000042,1.85e-13,12;UBERON:0003688,2.56e-12,6;UBERON:0002358,2.56e-12,6;UBERON:0003684,2.56e-12,6;UBERON:0001178,2.56e-12,6;UBERON:0002384,3.12e-11,371;UBERON:0005629,3.68e-10,2;UBERON:0005358,3.68e-10,2;UBERON:0001886,3.68e-10,2;UBERON:0004086,3.68e-10,2;UBERON:0005282,3.68e-10,2;UBERON:0005281,3.68e-10,2;UBERON:0004905,1.45e-09,8;UBERON:0000982,1.45e-09,8;UBERON:0004770,1.45e-09,8;UBERON:0001434,6.50e-08,100;UBERON:0006915,1.60e-07,3;UBERON:0007616,1.60e-07,3;UBERON:0002217,1.60e-07,3;UBERON:0002018,1.60e-07,3;UBERON:0002204,4.21e-07,167;UBERON:0007846,4.43e-07,3;UBERON:0000043,4.43e-07,3;UBERON:0007845,4.43e-07,3;UBERON:0002242,7.17e-07,3;UBERON:0003068,7.17e-07,3;UBERON:0002328,7.17e-07,3;UBERON:0004880,7.17e-07,3;UBERON:0006876,7.25e-07,11|phase1_expression=0.908391896352783,0.856402095563933,1.40954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.618831764800233,0.994192127183747,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,1.01778767145695,0.755751887377619,0,0,0.411167888021826,0,0.863077176966451,1.7931249457037,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0.545812300115692,1.57306439111559,0,0.641858054152187,0,0.659702600373432,1.39624560335142,0,0,0,0,1.7587406567972,1.0429658368404,0.65156653411535,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,2.50668955317945,1.30361867064741,0.795285947051099,0,0.661743720148475,0,0.087834785693126,0,0,0,2.27183175558278,0.870648686496336,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.264818361626438,0,0,0,0,0,0,0,0,1.81628913173918,1.72852777344,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0.494533858557114,0,0,0,0.125118519871964,0,0.438977620880838,1.22595118319608,0.600952235626387,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,1.17002132569619,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.87192013766656,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.714889968290738,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,1.19812427745791,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,1.08506009479894,0.415941723061614,0,0,0,1.20378439891088,2.27407504055985,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1545 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2597 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_CU680174,JF432813_5end | |||
|description=CAGE_peak_7_at_CYP1B1_5end | |||
|id=chr2:38302543..38302557,- | |||
|ontology_enrichment_celltype=CL:0000188!4.47e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.05e-17;12!CL:0002579;1.71e-14;3!CL:0002580;9.07e-14;3!CL:0000153;4.72e-13;9!CL:0000447;4.72e-13;9!CL:0002549;9.49e-10;2!CL:0000327;1.06e-07;15!CL:0000138;1.62e-07;6!CL:0000214;1.65e-07;3!CL:0000499;2.64e-07;28!CL:0000135;4.42e-07;3!CL:0000388;4.42e-07;3!CL:0002564;5.22e-07;3!CL:0002590;5.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.67e-17,12;CL:0002579,2.48e-14,3;CL:0002580,6.39e-14,3;CL:0000153,4.69e-13,9;CL:0000447,4.69e-13,9;CL:0002549,3.68e-10,2;CL:0002320,5.91e-10,361;CL:0000134,1.11e-08,354;CL:0000048,6.47e-08,427;CL:0000327,1.06e-07,15;CL:0000723,1.08e-07,433;CL:0000214,1.60e-07,3;CL:0000058,1.64e-07,6;CL:0000138,1.64e-07,6;CL:0000034,2.10e-07,441;CL:0000499,2.63e-07,28;CL:0000219,2.98e-07,386;CL:0000057,3.13e-07,76;CL:0002590,3.70e-07,3;CL:0000135,4.43e-07,3;CL:0000388,4.43e-07,3;CL:0002564,7.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.52e-10!167;UBERON:0004765!9.03e-09!101;UBERON:0001434!9.03e-09!101;UBERON:0002384!6.97e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.38e-18;9!UBERON:0000042;3.38e-18;9!UBERON:0005284;1.55e-14;5!UBERON:0003688;2.26e-12;6!UBERON:0002358;2.26e-12;6!UBERON:0003684;2.26e-12;6!UBERON:0001178;2.26e-12;6!UBERON:0005629;9.49e-10;2!UBERON:0005358;9.49e-10;2!UBERON:0001886;9.49e-10;2!UBERON:0004086;9.49e-10;2!UBERON:0005282;9.49e-10;2!UBERON:0005281;9.49e-10;2!UBERON:0004905;1.17e-09;8!UBERON:0000982;1.17e-09;8!UBERON:0004770;1.17e-09;8!UBERON:0006915;1.65e-07;3!UBERON:0007616;1.65e-07;3!UBERON:0002217;1.65e-07;3!UBERON:0002018;1.65e-07;3!UBERON:0007846;4.42e-07;3!UBERON:0000043;4.42e-07;3!UBERON:0007845;4.42e-07;3!UBERON:0002242;5.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,4.86e-15,5;UBERON:0004457,1.85e-13,12;UBERON:0000042,1.85e-13,12;UBERON:0003688,2.56e-12,6;UBERON:0002358,2.56e-12,6;UBERON:0003684,2.56e-12,6;UBERON:0001178,2.56e-12,6;UBERON:0002384,3.12e-11,371;UBERON:0005629,3.68e-10,2;UBERON:0005358,3.68e-10,2;UBERON:0001886,3.68e-10,2;UBERON:0004086,3.68e-10,2;UBERON:0005282,3.68e-10,2;UBERON:0005281,3.68e-10,2;UBERON:0004905,1.45e-09,8;UBERON:0000982,1.45e-09,8;UBERON:0004770,1.45e-09,8;UBERON:0001434,6.50e-08,100;UBERON:0006915,1.60e-07,3;UBERON:0007616,1.60e-07,3;UBERON:0002217,1.60e-07,3;UBERON:0002018,1.60e-07,3;UBERON:0002204,4.21e-07,167;UBERON:0007846,4.43e-07,3;UBERON:0000043,4.43e-07,3;UBERON:0007845,4.43e-07,3;UBERON:0002242,7.17e-07,3;UBERON:0003068,7.17e-07,3;UBERON:0002328,7.17e-07,3;UBERON:0004880,7.17e-07,3;UBERON:0006876,7.25e-07,11 | |||
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|short_description=p7@CYP1B1 | |||
}} |
Revision as of 18:30, 12 September 2013
Short description: | p7@CYP1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CYP1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_CU680174, JF432813_5end |
EntrezGene: | CYP1B1 |
HGNC: | 2597 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.67e-17 | 12 |
omentum preadipocyte | 2.48e-14 | 3 |
preadipocyte of the breast | 6.39e-14 | 3 |
GAG secreting cell | 4.69e-13 | 9 |
carbohydrate secreting cell | 4.69e-13 | 9 |
fibroblast of choroid plexus | 3.68e-10 | 2 |
connective tissue cell | 5.91e-10 | 361 |
mesenchymal cell | 1.11e-08 | 354 |
multi fate stem cell | 6.47e-08 | 427 |
extracellular matrix secreting cell | 1.06e-07 | 15 |
somatic stem cell | 1.08e-07 | 433 |
synovial cell | 1.60e-07 | 3 |
chondroblast | 1.64e-07 | 6 |
chondrocyte | 1.64e-07 | 6 |
stem cell | 2.10e-07 | 441 |
stromal cell | 2.63e-07 | 28 |
motile cell | 2.98e-07 | 386 |
fibroblast | 3.13e-07 | 76 |
smooth muscle cell of the brain vasculature | 3.70e-07 | 3 |
fibrocyte | 4.43e-07 | 3 |
tendon cell | 4.43e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 7.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 4.86e-15 | 5 |
cavity lining | 1.85e-13 | 12 |
serous membrane | 1.85e-13 | 12 |
omentum | 2.56e-12 | 6 |
peritoneum | 2.56e-12 | 6 |
abdominal cavity | 2.56e-12 | 6 |
visceral peritoneum | 2.56e-12 | 6 |
connective tissue | 3.12e-11 | 371 |
vascular plexus | 3.68e-10 | 2 |
ventricle of nervous system | 3.68e-10 | 2 |
choroid plexus | 3.68e-10 | 2 |
brain ventricle | 3.68e-10 | 2 |
ventricular system of brain | 3.68e-10 | 2 |
ventricular system of central nervous system | 3.68e-10 | 2 |
articulation | 1.45e-09 | 8 |
skeletal joint | 1.45e-09 | 8 |
articular system | 1.45e-09 | 8 |
skeletal system | 6.50e-08 | 100 |
stratified squamous epithelium | 1.60e-07 | 3 |
layer of synovial tissue | 1.60e-07 | 3 |
synovial joint | 1.60e-07 | 3 |
synovial membrane of synovial joint | 1.60e-07 | 3 |
musculoskeletal system | 4.21e-07 | 167 |
dense regular connective tissue | 4.43e-07 | 3 |
tendon | 4.43e-07 | 3 |
regular connective tissue | 4.43e-07 | 3 |
nucleus pulposus | 7.17e-07 | 3 |
axial mesoderm | 7.17e-07 | 3 |
notochord | 7.17e-07 | 3 |
chordamesoderm | 7.17e-07 | 3 |
vasculature of organ | 7.25e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.