FFCP PHASE1:Hg19::chr2:30455229..30455276,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81606|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29532|TSSclassifier=S|UniProt=B5MBX5|association_with_transcript=183bp_to_ENST00000407930_5end|coexpression_cluster_id=C57|description=CAGE_peak_3_at_LBH_5end|id=chr2:30455229..30455276,+|ontology_enrichment_celltype=CL:0000542!2.93e-24!53;CL:0000051!2.93e-24!53;CL:0000838!3.29e-24!52;CL:0000791!9.16e-14!18;CL:0000789!9.16e-14!18;CL:0002420!9.16e-14!18;CL:0002419!9.16e-14!18;CL:0000790!9.16e-14!18;CL:0000084!2.89e-12!25;CL:0000827!2.89e-12!25;CL:0000945!3.86e-11!24;CL:0000826!3.86e-11!24;CL:0000236!2.49e-10!14;CL:0000625!2.38e-09!11;CL:0000738!8.16e-07!140|ontology_enrichment_celltype_v019=CL:0000791;6.01e-26;18!CL:0000789;6.01e-26;18!CL:0002419;6.01e-26;18!CL:0000542;4.02e-24;53!CL:0000084;8.25e-23;25!CL:0000236;4.37e-18;13!CL:0000625;4.11e-17;11!CL:0000945;2.01e-13;24!CL:0000624;1.76e-09;6|ontology_enrichment_celltype_v019_2=CL:0000838,1.41e-38,52;CL:0000542,1.46e-37,53;CL:0000051,1.46e-37,53;CL:0000791,5.46e-26,18;CL:0000789,5.46e-26,18;CL:0002420,5.46e-26,18;CL:0002419,5.46e-26,18;CL:0000790,5.46e-26,18;CL:0000084,1.06e-22,25;CL:0000827,1.06e-22,25;CL:0000738,1.42e-21,136;CL:0000236,4.23e-19,14;CL:0000625,3.88e-17,11;CL:0002031,1.83e-16,120;CL:0002087,2.88e-16,115;CL:0000988,1.28e-15,177;CL:0000037,2.28e-15,168;CL:0000945,1.72e-13,24;CL:0000826,1.72e-13,24;CL:0002032,3.19e-12,161;CL:0000837,3.19e-12,161;CL:0000624,1.71e-09,6|ontology_enrichment_development_v019=CL:0000790;6.01e-26;18!CL:0000051;4.02e-24;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.13e-07!15;UBERON:0000179!2.13e-07!15;UBERON:0000463!2.13e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;4.80e-12;15!UBERON:0000179;4.80e-12;15!UBERON:0000463;4.80e-12;15!UBERON:0002390;4.64e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.58e-12,15;UBERON:0000179,4.58e-12,15;UBERON:0000463,4.58e-12,15;UBERON:0004177,5.44e-07,7;UBERON:0005057,5.44e-07,7|phase1_expression=0.726713517082227,0.642301571672949,0.563817616383885,0,0.893922188854576,0,0,0,0.783556884599516,0.245733936501509,0.697801167972428,0.655324116390517,1.58260186937072,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0.136874425072884,0,1.06978768047132,0.903106483949403,0.944529375764151,1.96682138424452,4.60595277716655,2.32224184974114,0,0,0,2.78881922089086,0.142169232487422,0.880801318004542,2.76997704265939,2.4065333696417,3.03815219002193,1.11957737119962,0.647787332037959,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,8.79981222306614,13.1073266702912,6.22656477704488,8.96133467389665,17.2170274425485,16.0930683187255,17.1871666924064,16.2189138271012,10.8150464130795,6.45960908308033,8.02773779062981,1.32171328579026,2.24203425192614,0.263384084775077,10.0321982758055,9.03924754323079,8.8408644569789,6.68745981562712,10.7554347989085,14.203434172042,9.74133642039557,4.45641827540694,6.48132996444642,7.97522020501036,9.47813523177554,2.81800903396485,6.63302672555379,3.4531959966772,3.86890024900188,6.37566788617116,7.1177550317789,9.36392898313996,11.4989076185474,3.85251765171725,6.89796888483458,6.52892146416997,6.32549230048757,14.9725744732325,11.0684187155591,7.60361635558699,10.6908334545219,13.6945673935228,12.4930726552346,10.8917535940248,18.064815932263,11.8947978502592,9.62784704820626,11.8756011183895,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0.579386075843295,0.795285947051099,0,0.189069634328136,0.221729397462564,0.351339142772504,1.17881167947941,0,0,0,0,0,2.38490624305342,2.28797964312051,6.68623502393217,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0.976248230192678,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0.993943903390637,0.379891534993739,0.132409180813219,0.286836620748814,1.06400514659507,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0.423863802319124,0.300091096084402,0.206105058476878,0,0.37223371266318,0.168776332241266,0.389748020644795,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.339121184620975,0.773043412653187,0.818238361772504,0.573609190778008,0.731842236777572,0.795178609928912,1.39432731443422,0.725627385107593,0,1.09493207722749,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,1.7658523976586,0.245976877086227,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0.939269553886573,0.866198686566443,0,0.380508304469197,0,0,0,0,0,0,1.51183915378974,0.283550194484773,0,0,0,0,5.54705134283324,2.90259361757081,2.4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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29532 | |||
|TSSclassifier=S | |||
|UniProt=B5MBX5 | |||
|association_with_transcript=183bp_to_ENST00000407930_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_LBH_5end | |||
|id=chr2:30455229..30455276,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.93e-24!53;CL:0000051!2.93e-24!53;CL:0000838!3.29e-24!52;CL:0000791!9.16e-14!18;CL:0000789!9.16e-14!18;CL:0002420!9.16e-14!18;CL:0002419!9.16e-14!18;CL:0000790!9.16e-14!18;CL:0000084!2.89e-12!25;CL:0000827!2.89e-12!25;CL:0000945!3.86e-11!24;CL:0000826!3.86e-11!24;CL:0000236!2.49e-10!14;CL:0000625!2.38e-09!11;CL:0000738!8.16e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.01e-26;18!CL:0000789;6.01e-26;18!CL:0002419;6.01e-26;18!CL:0000542;4.02e-24;53!CL:0000084;8.25e-23;25!CL:0000236;4.37e-18;13!CL:0000625;4.11e-17;11!CL:0000945;2.01e-13;24!CL:0000624;1.76e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.41e-38,52;CL:0000542,1.46e-37,53;CL:0000051,1.46e-37,53;CL:0000791,5.46e-26,18;CL:0000789,5.46e-26,18;CL:0002420,5.46e-26,18;CL:0002419,5.46e-26,18;CL:0000790,5.46e-26,18;CL:0000084,1.06e-22,25;CL:0000827,1.06e-22,25;CL:0000738,1.42e-21,136;CL:0000236,4.23e-19,14;CL:0000625,3.88e-17,11;CL:0002031,1.83e-16,120;CL:0002087,2.88e-16,115;CL:0000988,1.28e-15,177;CL:0000037,2.28e-15,168;CL:0000945,1.72e-13,24;CL:0000826,1.72e-13,24;CL:0002032,3.19e-12,161;CL:0000837,3.19e-12,161;CL:0000624,1.71e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000790;6.01e-26;18!CL:0000051;4.02e-24;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.13e-07!15;UBERON:0000179!2.13e-07!15;UBERON:0000463!2.13e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.80e-12;15!UBERON:0000179;4.80e-12;15!UBERON:0000463;4.80e-12;15!UBERON:0002390;4.64e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.58e-12,15;UBERON:0000179,4.58e-12,15;UBERON:0000463,4.58e-12,15;UBERON:0004177,5.44e-07,7;UBERON:0005057,5.44e-07,7 | |||
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| |||
|short_description=p3@LBH | |||
}} |
Revision as of 18:17, 12 September 2013
Short description: | p3@LBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LBH_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 183bp_to_ENST00000407930_5end |
EntrezGene: | LBH |
HGNC: | 29532 |
UniProt: | B5MBX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.41e-38 | 52 |
lymphocyte | 1.46e-37 | 53 |
common lymphoid progenitor | 1.46e-37 | 53 |
mature alpha-beta T cell | 5.46e-26 | 18 |
alpha-beta T cell | 5.46e-26 | 18 |
immature T cell | 5.46e-26 | 18 |
mature T cell | 5.46e-26 | 18 |
immature alpha-beta T cell | 5.46e-26 | 18 |
T cell | 1.06e-22 | 25 |
pro-T cell | 1.06e-22 | 25 |
leukocyte | 1.42e-21 | 136 |
B cell | 4.23e-19 | 14 |
CD8-positive, alpha-beta T cell | 3.88e-17 | 11 |
hematopoietic lineage restricted progenitor cell | 1.83e-16 | 120 |
nongranular leukocyte | 2.88e-16 | 115 |
hematopoietic cell | 1.28e-15 | 177 |
hematopoietic stem cell | 2.28e-15 | 168 |
lymphocyte of B lineage | 1.72e-13 | 24 |
pro-B cell | 1.72e-13 | 24 |
hematopoietic oligopotent progenitor cell | 3.19e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.19e-12 | 161 |
CD4-positive, alpha-beta T cell | 1.71e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 4.58e-12 | 15 |
haemolymphatic fluid | 4.58e-12 | 15 |
organism substance | 4.58e-12 | 15 |
hemopoietic organ | 5.44e-07 | 7 |
immune organ | 5.44e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.