FFCP PHASE1:Hg19::chr2:27310085..27310100,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3795|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6315|TSSclassifier=S|UniProt=C9JDL1|association_with_transcript=423bp_to_ENST00000429697_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_KHK_5end|id=chr2:27310085..27310100,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;5.78e-17;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.62e-17,12|ontology_enrichment_development_v019=UBERON:0004161;7.37e-13;11!UBERON:0009497;7.64e-11;13!UBERON:0003104;2.80e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;7.36e-07;1|ontology_enrichment_disease_v019_2=DOID:9119,6.76e-07,1|ontology_enrichment_uberon=UBERON:0000073!8.87e-11!94;UBERON:0001016!8.87e-11!94;UBERON:0005743!9.27e-10!86;UBERON:0007023!9.51e-10!115;UBERON:0005172!2.41e-09!55;UBERON:0005173!2.41e-09!55;UBERON:0001017!3.74e-09!82;UBERON:0000481!1.05e-08!347;UBERON:0001049!1.16e-08!57;UBERON:0005068!1.16e-08!57;UBERON:0006241!1.16e-08!57;UBERON:0007135!1.16e-08!57;UBERON:0002417!1.51e-08!61;UBERON:0000916!1.51e-08!61;UBERON:0000955!2.05e-08!69;UBERON:0006238!2.05e-08!69;UBERON:0002346!2.25e-08!90;UBERON:0004733!3.06e-08!12;UBERON:0002028!3.06e-08!12;UBERON:0007277!3.06e-08!12;UBERON:0002616!4.21e-08!59;UBERON:0002680!6.17e-08!9;UBERON:0001895!6.17e-08!9;UBERON:0010092!6.17e-08!9;UBERON:0007499!7.06e-08!25;UBERON:0000025!9.07e-08!194;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0003076!1.38e-07!15;UBERON:0003057!1.38e-07!15;UBERON:0004732!1.99e-07!13;UBERON:0009856!2.01e-07!26;UBERON:0000064!2.37e-07!219;UBERON:0002107!3.00e-07!19;UBERON:0006925!3.00e-07!19;UBERON:0008836!3.00e-07!19;UBERON:0000924!3.19e-07!173;UBERON:0006601!3.19e-07!173;UBERON:0000062!4.54e-07!511;UBERON:0005177!4.76e-07!107;UBERON:0008835!7.23e-07!22;UBERON:0003894!7.23e-07!22;UBERON:0009569!9.44e-07!113|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-18;19!UBERON:0006925;1.88e-18;19!UBERON:0000160;1.09e-14;17!UBERON:0002423;1.00e-13;25!UBERON:0005409;2.67e-11;22!UBERON:0002108;3.68e-11;4!UBERON:0002365;1.83e-10;31!UBERON:0002330;1.83e-10;31!UBERON:0002368;3.10e-09;33!UBERON:0001007;1.28e-07;81!UBERON:0004921;5.59e-07;33!UBERON:0000949;8.00e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.83e-18,19;UBERON:0006925,1.83e-18,19;UBERON:0008836,1.83e-18,19;UBERON:0008835,8.92e-16,22;UBERON:0003894,8.92e-16,22;UBERON:0009854,4.90e-15,23;UBERON:0000160,1.09e-14,17;UBERON:0007499,9.84e-14,25;UBERON:0009497,9.84e-14,25;UBERON:0000015,9.84e-14,25;UBERON:0002423,9.84e-14,25;UBERON:0006235,9.84e-14,25;UBERON:0004161,9.84e-14,25;UBERON:0009856,3.71e-13,26;UBERON:0002108,3.56e-11,4;UBERON:0002365,7.81e-11,31;UBERON:0002330,7.81e-11,31;UBERON:0005409,6.83e-10,25;UBERON:0002368,1.87e-09,35;UBERON:0005172,6.12e-09,54;UBERON:0005173,6.12e-09,54;UBERON:0004921,6.49e-09,118;UBERON:0011216,2.97e-08,223;UBERON:0002417,7.25e-08,60;UBERON:0000916,7.25e-08,60;UBERON:0003929,3.83e-07,54;UBERON:0000949,4.43e-07,45|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,24.4930871180723,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,145.768290045105,105.162512184506,121.702720776369,0,1.47586126251736,0,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0.246217006087397,0,0,1.87467667973554,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.671624264166535,0,0,0,0,0.325378394664303,38.1251743096572,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,36.0570756975064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,2.99764771198038,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3795 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6315 | |||
|TSSclassifier=S | |||
|UniProt=C9JDL1 | |||
|association_with_transcript=423bp_to_ENST00000429697_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_KHK_5end | |||
|id=chr2:27310085..27310100,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.78e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.62e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.37e-13;11!UBERON:0009497;7.64e-11;13!UBERON:0003104;2.80e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;7.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.87e-11!94;UBERON:0001016!8.87e-11!94;UBERON:0005743!9.27e-10!86;UBERON:0007023!9.51e-10!115;UBERON:0005172!2.41e-09!55;UBERON:0005173!2.41e-09!55;UBERON:0001017!3.74e-09!82;UBERON:0000481!1.05e-08!347;UBERON:0001049!1.16e-08!57;UBERON:0005068!1.16e-08!57;UBERON:0006241!1.16e-08!57;UBERON:0007135!1.16e-08!57;UBERON:0002417!1.51e-08!61;UBERON:0000916!1.51e-08!61;UBERON:0000955!2.05e-08!69;UBERON:0006238!2.05e-08!69;UBERON:0002346!2.25e-08!90;UBERON:0004733!3.06e-08!12;UBERON:0002028!3.06e-08!12;UBERON:0007277!3.06e-08!12;UBERON:0002616!4.21e-08!59;UBERON:0002680!6.17e-08!9;UBERON:0001895!6.17e-08!9;UBERON:0010092!6.17e-08!9;UBERON:0007499!7.06e-08!25;UBERON:0000025!9.07e-08!194;UBERON:0003075!1.18e-07!86;UBERON:0007284!1.18e-07!86;UBERON:0003076!1.38e-07!15;UBERON:0003057!1.38e-07!15;UBERON:0004732!1.99e-07!13;UBERON:0009856!2.01e-07!26;UBERON:0000064!2.37e-07!219;UBERON:0002107!3.00e-07!19;UBERON:0006925!3.00e-07!19;UBERON:0008836!3.00e-07!19;UBERON:0000924!3.19e-07!173;UBERON:0006601!3.19e-07!173;UBERON:0000062!4.54e-07!511;UBERON:0005177!4.76e-07!107;UBERON:0008835!7.23e-07!22;UBERON:0003894!7.23e-07!22;UBERON:0009569!9.44e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.88e-18;19!UBERON:0006925;1.88e-18;19!UBERON:0000160;1.09e-14;17!UBERON:0002423;1.00e-13;25!UBERON:0005409;2.67e-11;22!UBERON:0002108;3.68e-11;4!UBERON:0002365;1.83e-10;31!UBERON:0002330;1.83e-10;31!UBERON:0002368;3.10e-09;33!UBERON:0001007;1.28e-07;81!UBERON:0004921;5.59e-07;33!UBERON:0000949;8.00e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.83e-18,19;UBERON:0006925,1.83e-18,19;UBERON:0008836,1.83e-18,19;UBERON:0008835,8.92e-16,22;UBERON:0003894,8.92e-16,22;UBERON:0009854,4.90e-15,23;UBERON:0000160,1.09e-14,17;UBERON:0007499,9.84e-14,25;UBERON:0009497,9.84e-14,25;UBERON:0000015,9.84e-14,25;UBERON:0002423,9.84e-14,25;UBERON:0006235,9.84e-14,25;UBERON:0004161,9.84e-14,25;UBERON:0009856,3.71e-13,26;UBERON:0002108,3.56e-11,4;UBERON:0002365,7.81e-11,31;UBERON:0002330,7.81e-11,31;UBERON:0005409,6.83e-10,25;UBERON:0002368,1.87e-09,35;UBERON:0005172,6.12e-09,54;UBERON:0005173,6.12e-09,54;UBERON:0004921,6.49e-09,118;UBERON:0011216,2.97e-08,223;UBERON:0002417,7.25e-08,60;UBERON:0000916,7.25e-08,60;UBERON:0003929,3.83e-07,54;UBERON:0000949,4.43e-07,45 | |||
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|short_description=p2@KHK | |||
}} |
Revision as of 18:05, 12 September 2013
Short description: | p2@KHK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KHK_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 423bp_to_ENST00000429697_5end |
EntrezGene: | KHK |
HGNC: | 6315 |
UniProt: | C9JDL1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.62e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.83e-18 | 19 |
digestive gland | 1.83e-18 | 19 |
liver bud | 1.83e-18 | 19 |
hepatic diverticulum | 8.92e-16 | 22 |
liver primordium | 8.92e-16 | 22 |
digestive tract diverticulum | 4.90e-15 | 23 |
intestine | 1.09e-14 | 17 |
epithelial sac | 9.84e-14 | 25 |
epithelium of foregut-midgut junction | 9.84e-14 | 25 |
anatomical boundary | 9.84e-14 | 25 |
hepatobiliary system | 9.84e-14 | 25 |
foregut-midgut junction | 9.84e-14 | 25 |
septum transversum | 9.84e-14 | 25 |
sac | 3.71e-13 | 26 |
small intestine | 3.56e-11 | 4 |
exocrine gland | 7.81e-11 | 31 |
exocrine system | 7.81e-11 | 31 |
gastrointestinal system | 6.83e-10 | 25 |
endocrine gland | 1.87e-09 | 35 |
abdomen element | 6.12e-09 | 54 |
abdominal segment element | 6.12e-09 | 54 |
subdivision of digestive tract | 6.49e-09 | 118 |
organ system subdivision | 2.97e-08 | 223 |
abdominal segment of trunk | 7.25e-08 | 60 |
abdomen | 7.25e-08 | 60 |
gut epithelium | 3.83e-07 | 54 |
endocrine system | 4.43e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.76e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.