FFCP PHASE1:Mm9::chr10:95833461..95833474,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=21|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:95833461..95833474,-|id=chr10:95833461..95833474,-|ontology_enrichment_celltype=CL:0000838!3.51e-29!12;CL:0000791!4.85e-27!9;CL:0000789!4.85e-27!9;CL:0002420!4.85e-27!9;CL:0002419!4.85e-27!9;CL:0000790!4.85e-27!9;CL:0000542!9.28e-27!13;CL:0000051!9.28e-27!13;CL:0000084!2.46e-26!11;CL:0000827!2.46e-26!11;CL:0002031!2.16e-24!25;CL:0000624!3.00e-24!8;CL:0000988!1.23e-23!32;CL:0002032!1.23e-23!32;CL:0000037!1.23e-23!32;CL:0000566!1.23e-23!32;CL:0000837!1.23e-23!32;CL:0000738!6.42e-20!17;CL:0002087!6.42e-20!17;CL:0000893!2.56e-18!6;CL:0002489!2.56e-18!6;CL:0000898!2.56e-18!6;CL:0000809!2.56e-18!6;CL:0000810!2.56e-18!6;CL:0000895!2.56e-18!6;CL:0000808!2.56e-18!6;CL:0000894!2.56e-18!6;CL:0000806!2.56e-18!6;CL:0000807!2.56e-18!6;CL:0000805!2.56e-18!6;CL:0002425!2.56e-18!6;CL:0002436!2.56e-18!6;CL:0002427!2.56e-18!6;CL:0002428!2.56e-18!6;CL:0002429!2.56e-18!6;CL:0002433!2.56e-18!6;CL:0002431!2.56e-18!6;CL:0002432!2.56e-18!6;CL:0002320!2.82e-15!46;CL:0000134!2.82e-15!46;CL:0000219!1.89e-12!54;CL:0000063!1.67e-09!66;CL:0000553!4.24e-08!6;CL:0000556!4.24e-08!6;CL:0000034!4.92e-08!97|ontology_enrichment_celltype_v019_2=CL:0000791,6.32e-53,9;CL:0000789,6.32e-53,9;CL:0002420,6.32e-53,9;CL:0002419,6.32e-53,9;CL:0000790,6.32e-53,9;CL:0000838,1.15e-51,12;CL:0000542,1.06e-47,13;CL:0000051,1.06e-47,13;CL:0000624,3.61e-44,8;CL:0000084,2.47e-43,11;CL:0000827,2.47e-43,11;CL:0000738,1.72e-36,17;CL:0002087,1.72e-36,17;CL:0002031,3.19e-31,25;CL:0000893,2.29e-26,6;CL:0002489,2.29e-26,6;CL:0000898,2.29e-26,6;CL:0000809,2.29e-26,6;CL:0000810,2.29e-26,6;CL:0000895,2.29e-26,6;CL:0000808,2.29e-26,6;CL:0000894,2.29e-26,6;CL:0000806,2.29e-26,6;CL:0000807,2.29e-26,6;CL:0000805,2.29e-26,6;CL:0002425,2.29e-26,6;CL:0002436,2.29e-26,6;CL:0002427,2.29e-26,6;CL:0002428,2.29e-26,6;CL:0002429,2.29e-26,6;CL:0002433,2.29e-26,6;CL:0002431,2.29e-26,6;CL:0002432,2.29e-26,6;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000945,5.74e-11,1;CL:0000236,5.74e-11,1;CL:0000826,5.74e-11,1;CL:0000625,8.99e-11,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.82e-15!46;UBERON:0002390!7.80e-15!45;UBERON:0003061!7.80e-15!45;UBERON:0004177!6.01e-14!29;UBERON:0002193!1.12e-13!48;UBERON:0002370!4.40e-13!23;UBERON:0000974!4.40e-13!23;UBERON:0004807!4.40e-13!23;UBERON:0005058!4.40e-13!23;UBERON:0003351!4.40e-13!23;UBERON:0009113!4.40e-13!23;UBERON:0003295!4.40e-13!23;UBERON:0009722!4.40e-13!23;UBERON:0005562!4.40e-13!23;UBERON:0007690!4.40e-13!23;UBERON:0006562!1.90e-12!24;UBERON:0003408!1.90e-12!24;UBERON:0001557!1.90e-12!24;UBERON:0001042!1.90e-12!24;UBERON:0008814!1.90e-12!24;UBERON:0009145!1.90e-12!24;UBERON:0000072!8.01e-11!27;UBERON:0000065!4.40e-09!41;UBERON:0001004!8.36e-09!42;UBERON:0002405!3.13e-08!70;UBERON:0000063!7.33e-08!35;UBERON:0005057!8.56e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,3.61e-07,23;UBERON:0000974,3.61e-07,23;UBERON:0004807,3.61e-07,23;UBERON:0005058,3.61e-07,23;UBERON:0003351,3.61e-07,23;UBERON:0009113,3.61e-07,23;UBERON:0003295,3.61e-07,23;UBERON:0009722,3.61e-07,23;UBERON:0005562,3.61e-07,23;UBERON:0007690,3.61e-07,23;UBERON:0006562,6.98e-07,24;UBERON:0003408,6.98e-07,24;UBERON:0001557,6.98e-07,24;UBERON:0001042,6.98e-07,24;UBERON:0008814,6.98e-07,24;UBERON:0009145,6.98e-07,24|phase1_expression=0,0,0,0,0,0,0,15.1074288426644,6.75785866328,5.61754863172784,0.856089841127525,0.717949430958028,5.82082481766099,4.19617931611188,0,0.404950534779652,0,0.946386496074713,0.411343300817216,1.27316895539409,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,10.8804321301702,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.849892149969277,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr10:95833461..95833474,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:95833461..95833474,- | |||
|id=chr10:95833461..95833474,- | |||
|ontology_enrichment_celltype=CL:0000838!3.51e-29!12;CL:0000791!4.85e-27!9;CL:0000789!4.85e-27!9;CL:0002420!4.85e-27!9;CL:0002419!4.85e-27!9;CL:0000790!4.85e-27!9;CL:0000542!9.28e-27!13;CL:0000051!9.28e-27!13;CL:0000084!2.46e-26!11;CL:0000827!2.46e-26!11;CL:0002031!2.16e-24!25;CL:0000624!3.00e-24!8;CL:0000988!1.23e-23!32;CL:0002032!1.23e-23!32;CL:0000037!1.23e-23!32;CL:0000566!1.23e-23!32;CL:0000837!1.23e-23!32;CL:0000738!6.42e-20!17;CL:0002087!6.42e-20!17;CL:0000893!2.56e-18!6;CL:0002489!2.56e-18!6;CL:0000898!2.56e-18!6;CL:0000809!2.56e-18!6;CL:0000810!2.56e-18!6;CL:0000895!2.56e-18!6;CL:0000808!2.56e-18!6;CL:0000894!2.56e-18!6;CL:0000806!2.56e-18!6;CL:0000807!2.56e-18!6;CL:0000805!2.56e-18!6;CL:0002425!2.56e-18!6;CL:0002436!2.56e-18!6;CL:0002427!2.56e-18!6;CL:0002428!2.56e-18!6;CL:0002429!2.56e-18!6;CL:0002433!2.56e-18!6;CL:0002431!2.56e-18!6;CL:0002432!2.56e-18!6;CL:0002320!2.82e-15!46;CL:0000134!2.82e-15!46;CL:0000219!1.89e-12!54;CL:0000063!1.67e-09!66;CL:0000553!4.24e-08!6;CL:0000556!4.24e-08!6;CL:0000034!4.92e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.32e-53,9;CL:0000789,6.32e-53,9;CL:0002420,6.32e-53,9;CL:0002419,6.32e-53,9;CL:0000790,6.32e-53,9;CL:0000838,1.15e-51,12;CL:0000542,1.06e-47,13;CL:0000051,1.06e-47,13;CL:0000624,3.61e-44,8;CL:0000084,2.47e-43,11;CL:0000827,2.47e-43,11;CL:0000738,1.72e-36,17;CL:0002087,1.72e-36,17;CL:0002031,3.19e-31,25;CL:0000893,2.29e-26,6;CL:0002489,2.29e-26,6;CL:0000898,2.29e-26,6;CL:0000809,2.29e-26,6;CL:0000810,2.29e-26,6;CL:0000895,2.29e-26,6;CL:0000808,2.29e-26,6;CL:0000894,2.29e-26,6;CL:0000806,2.29e-26,6;CL:0000807,2.29e-26,6;CL:0000805,2.29e-26,6;CL:0002425,2.29e-26,6;CL:0002436,2.29e-26,6;CL:0002427,2.29e-26,6;CL:0002428,2.29e-26,6;CL:0002429,2.29e-26,6;CL:0002433,2.29e-26,6;CL:0002431,2.29e-26,6;CL:0002432,2.29e-26,6;CL:0000988,2.23e-24,32;CL:0002032,2.23e-24,32;CL:0000037,2.23e-24,32;CL:0000837,2.23e-24,32;CL:0002320,6.46e-17,46;CL:0000134,6.46e-17,46;CL:0000219,2.22e-14,54;CL:0000815,1.83e-11,1;CL:0000792,1.83e-11,1;CL:0000945,5.74e-11,1;CL:0000236,5.74e-11,1;CL:0000826,5.74e-11,1;CL:0000625,8.99e-11,1;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.82e-15!46;UBERON:0002390!7.80e-15!45;UBERON:0003061!7.80e-15!45;UBERON:0004177!6.01e-14!29;UBERON:0002193!1.12e-13!48;UBERON:0002370!4.40e-13!23;UBERON:0000974!4.40e-13!23;UBERON:0004807!4.40e-13!23;UBERON:0005058!4.40e-13!23;UBERON:0003351!4.40e-13!23;UBERON:0009113!4.40e-13!23;UBERON:0003295!4.40e-13!23;UBERON:0009722!4.40e-13!23;UBERON:0005562!4.40e-13!23;UBERON:0007690!4.40e-13!23;UBERON:0006562!1.90e-12!24;UBERON:0003408!1.90e-12!24;UBERON:0001557!1.90e-12!24;UBERON:0001042!1.90e-12!24;UBERON:0008814!1.90e-12!24;UBERON:0009145!1.90e-12!24;UBERON:0000072!8.01e-11!27;UBERON:0000065!4.40e-09!41;UBERON:0001004!8.36e-09!42;UBERON:0002405!3.13e-08!70;UBERON:0000063!7.33e-08!35;UBERON:0005057!8.56e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.46e-17,46;UBERON:0002370,3.61e-07,23;UBERON:0000974,3.61e-07,23;UBERON:0004807,3.61e-07,23;UBERON:0005058,3.61e-07,23;UBERON:0003351,3.61e-07,23;UBERON:0009113,3.61e-07,23;UBERON:0003295,3.61e-07,23;UBERON:0009722,3.61e-07,23;UBERON:0005562,3.61e-07,23;UBERON:0007690,3.61e-07,23;UBERON:0006562,6.98e-07,24;UBERON:0003408,6.98e-07,24;UBERON:0001557,6.98e-07,24;UBERON:0001042,6.98e-07,24;UBERON:0008814,6.98e-07,24;UBERON:0009145,6.98e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,15.1074288426644,6.75785866328,5.61754863172784,0.856089841127525,0.717949430958028,5.82082481766099,4.19617931611188,0,0.404950534779652,0,0.946386496074713,0.411343300817216,1.27316895539409,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,10.8804321301702,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.849892149969277,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:95833461..95833474,- | |||
}} |
Revision as of 18:04, 12 September 2013
Short description: | p@chr10:95833461..95833474, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:95833461..95833474, - |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.46e-17 | 46 |
thymus | 3.61e-07 | 23 |
neck | 3.61e-07 | 23 |
respiratory system epithelium | 3.61e-07 | 23 |
hemolymphoid system gland | 3.61e-07 | 23 |
pharyngeal epithelium | 3.61e-07 | 23 |
thymic region | 3.61e-07 | 23 |
pharyngeal gland | 3.61e-07 | 23 |
entire pharyngeal arch endoderm | 3.61e-07 | 23 |
thymus primordium | 3.61e-07 | 23 |
early pharyngeal endoderm | 3.61e-07 | 23 |
pharynx | 6.98e-07 | 24 |
gland of gut | 6.98e-07 | 24 |
upper respiratory tract | 6.98e-07 | 24 |
chordate pharynx | 6.98e-07 | 24 |
pharyngeal arch system | 6.98e-07 | 24 |
pharyngeal region of foregut | 6.98e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.