FFCP PHASE1:Hg19::chr2:242051975..242051994,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23178|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17270|TSSclassifier=S|UniProt=|association_with_transcript=-135bp_to_ENST00000475666_5end|coexpression_cluster_id=C1224|description=CAGE_peak_2_at_PASK_5end|id=chr2:242051975..242051994,-|ontology_enrichment_celltype=CL:0000738!2.06e-36!140;CL:0002087!6.05e-34!119;CL:0002031!1.59e-27!124;CL:0000037!3.96e-25!172;CL:0000566!3.96e-25!172;CL:0000838!5.25e-23!52;CL:0002032!6.91e-23!165;CL:0000837!6.91e-23!165;CL:0000791!8.22e-23!18;CL:0000789!8.22e-23!18;CL:0002420!8.22e-23!18;CL:0002419!8.22e-23!18;CL:0000790!8.22e-23!18;CL:0000988!1.84e-22!182;CL:0000542!2.40e-22!53;CL:0000051!2.40e-22!53;CL:0000084!3.56e-18!25;CL:0000827!3.56e-18!25;CL:0000625!3.48e-16!11;CL:0002057!1.89e-13!42;CL:0000766!3.46e-13!76;CL:0000860!4.85e-12!45;CL:0002194!3.10e-10!63;CL:0000576!3.10e-10!63;CL:0000040!3.10e-10!63;CL:0000559!3.10e-10!63;CL:0000624!5.69e-10!6;CL:0002009!1.14e-09!65;CL:0000839!2.06e-08!70;CL:0000557!3.48e-08!71;CL:0000094!5.75e-08!8|ontology_enrichment_celltype_v019=CL:0000791;1.69e-37;18!CL:0000789;1.69e-37;18!CL:0002419;1.69e-37;18!CL:0000084;1.40e-28;25!CL:0000625;5.43e-26;11!CL:0000624;1.28e-15;6!CL:0000542;1.84e-12;53!CL:0000094;1.85e-12;8!CL:0002087;2.83e-09;104!CL:0000081;8.97e-09;11!CL:0000226;1.71e-08;3!CL:0000842;1.71e-08;3!CL:0000898;2.13e-08;3!CL:0000623;2.81e-08;3!CL:0000767;3.70e-07;3|ontology_enrichment_celltype_v019_2=CL:0000791,1.68e-37,18;CL:0000789,1.68e-37,18;CL:0002420,1.68e-37,18;CL:0002419,1.68e-37,18;CL:0000790,1.68e-37,18;CL:0000084,1.45e-28,25;CL:0000827,1.45e-28,25;CL:0000838,3.63e-27,52;CL:0000542,1.68e-26,53;CL:0000051,1.68e-26,53;CL:0000738,2.09e-26,136;CL:0000625,5.26e-26,11;CL:0002087,5.49e-23,115;CL:0000037,6.34e-19,168;CL:0002031,1.68e-17,120;CL:0000988,2.54e-17,177;CL:0002032,8.58e-17,161;CL:0000837,8.58e-17,161;CL:0000624,1.32e-15,6;CL:0000094,1.42e-12,8;CL:0000081,7.47e-09,11;CL:0000226,1.71e-08,3;CL:0000842,1.71e-08,3;CL:0000898,2.19e-08,3;CL:0000623,2.72e-08,3;CL:0000825,2.72e-08,3;CL:0000767,3.10e-07,3|ontology_enrichment_development_v019=CL:0000790;1.69e-37;18!CL:0000051;1.84e-12;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.95e-18!102;UBERON:0003061!6.95e-18!102;UBERON:0002193!4.68e-17!112;UBERON:0000178!2.97e-12!15;UBERON:0000179!2.97e-12!15;UBERON:0000463!2.97e-12!15;UBERON:0002405!8.39e-08!115;UBERON:0004177!2.46e-07!7;UBERON:0002371!5.62e-07!80|ontology_enrichment_uberon_v019=UBERON:0000178;2.39e-20;15!UBERON:0000179;2.39e-20;15!UBERON:0000463;2.39e-20;15!UBERON:0002390;2.87e-15;32!UBERON:0004177;5.07e-11;5!UBERON:0005057;5.07e-11;5!UBERON:0002193;9.96e-11;42!UBERON:0002106;1.94e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.67e-20,15;UBERON:0000179,2.67e-20,15;UBERON:0000463,2.67e-20,15;UBERON:0004177,1.58e-11,7;UBERON:0005057,1.58e-11,7;UBERON:0002193,1.71e-11,108;UBERON:0002390,3.60e-11,98;UBERON:0003061,3.60e-11,98;UBERON:0002106,1.58e-07,3;UBERON:0004854,1.58e-07,3;UBERON:0009034,1.58e-07,3;UBERON:0002095,1.58e-07,3;UBERON:0004782,1.58e-07,3;UBERON:0003281,1.58e-07,3;UBERON:0009664,1.58e-07,3;UBERON:0002296,1.58e-07,3;UBERON:0005602,1.58e-07,3;UBERON:0001179,1.58e-07,3;UBERON:0006293,1.58e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,1.72411237844886,1.8890587515283,5.11373559903575,1.91914699048606,2.47705797305722,0,0,0,0,0.710846162437108,0,4.9859586767869,6.01633342410425,4.34021741431704,0.671746422719773,2.59114932815184,0.77272670290256,0.290796477559129,1.13362783106643,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,1.0246428261164,0.236482229888585,0.344745680736619,1.29096936716765,0,0.188242339542605,1.09162460023138,0,0.918251677112708,1.28371610830437,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.502497330513487,1.5644487552606,0.217188844705117,0,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,0,14.5732226375199,0,48.9807327583444,84.4973139910704,68.8765021648356,0.334372990781356,17.5998023982139,30.3006595670229,1.94826728407911,4.01077644786625,12.0788422064683,27.6917368229526,8.39491977671548,2.0494611156108,1.43065282315866,1.31550323682941,1.65810010671509,1.15921234294021,25.6535754270365,24.6137561842536,14.6349733326968,1.58633079776593,105.002415246926,176.280879532589,67.5562577692073,20.3881865167422,26.6944216081132,30.414465422348,10.3896832163663,12.2867146708242,9.99445812418767,15.3905213828611,18.8859439291841,34.676359834654,12.8371293976084,35.4819789512858,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23178 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17270 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-135bp_to_ENST00000475666_5end | |||
|coexpression_cluster_id=C1224 | |||
|description=CAGE_peak_2_at_PASK_5end | |||
|id=chr2:242051975..242051994,- | |||
|ontology_enrichment_celltype=CL:0000738!2.06e-36!140;CL:0002087!6.05e-34!119;CL:0002031!1.59e-27!124;CL:0000037!3.96e-25!172;CL:0000566!3.96e-25!172;CL:0000838!5.25e-23!52;CL:0002032!6.91e-23!165;CL:0000837!6.91e-23!165;CL:0000791!8.22e-23!18;CL:0000789!8.22e-23!18;CL:0002420!8.22e-23!18;CL:0002419!8.22e-23!18;CL:0000790!8.22e-23!18;CL:0000988!1.84e-22!182;CL:0000542!2.40e-22!53;CL:0000051!2.40e-22!53;CL:0000084!3.56e-18!25;CL:0000827!3.56e-18!25;CL:0000625!3.48e-16!11;CL:0002057!1.89e-13!42;CL:0000766!3.46e-13!76;CL:0000860!4.85e-12!45;CL:0002194!3.10e-10!63;CL:0000576!3.10e-10!63;CL:0000040!3.10e-10!63;CL:0000559!3.10e-10!63;CL:0000624!5.69e-10!6;CL:0002009!1.14e-09!65;CL:0000839!2.06e-08!70;CL:0000557!3.48e-08!71;CL:0000094!5.75e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.69e-37;18!CL:0000789;1.69e-37;18!CL:0002419;1.69e-37;18!CL:0000084;1.40e-28;25!CL:0000625;5.43e-26;11!CL:0000624;1.28e-15;6!CL:0000542;1.84e-12;53!CL:0000094;1.85e-12;8!CL:0002087;2.83e-09;104!CL:0000081;8.97e-09;11!CL:0000226;1.71e-08;3!CL:0000842;1.71e-08;3!CL:0000898;2.13e-08;3!CL:0000623;2.81e-08;3!CL:0000767;3.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.68e-37,18;CL:0000789,1.68e-37,18;CL:0002420,1.68e-37,18;CL:0002419,1.68e-37,18;CL:0000790,1.68e-37,18;CL:0000084,1.45e-28,25;CL:0000827,1.45e-28,25;CL:0000838,3.63e-27,52;CL:0000542,1.68e-26,53;CL:0000051,1.68e-26,53;CL:0000738,2.09e-26,136;CL:0000625,5.26e-26,11;CL:0002087,5.49e-23,115;CL:0000037,6.34e-19,168;CL:0002031,1.68e-17,120;CL:0000988,2.54e-17,177;CL:0002032,8.58e-17,161;CL:0000837,8.58e-17,161;CL:0000624,1.32e-15,6;CL:0000094,1.42e-12,8;CL:0000081,7.47e-09,11;CL:0000226,1.71e-08,3;CL:0000842,1.71e-08,3;CL:0000898,2.19e-08,3;CL:0000623,2.72e-08,3;CL:0000825,2.72e-08,3;CL:0000767,3.10e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.69e-37;18!CL:0000051;1.84e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.95e-18!102;UBERON:0003061!6.95e-18!102;UBERON:0002193!4.68e-17!112;UBERON:0000178!2.97e-12!15;UBERON:0000179!2.97e-12!15;UBERON:0000463!2.97e-12!15;UBERON:0002405!8.39e-08!115;UBERON:0004177!2.46e-07!7;UBERON:0002371!5.62e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.39e-20;15!UBERON:0000179;2.39e-20;15!UBERON:0000463;2.39e-20;15!UBERON:0002390;2.87e-15;32!UBERON:0004177;5.07e-11;5!UBERON:0005057;5.07e-11;5!UBERON:0002193;9.96e-11;42!UBERON:0002106;1.94e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.67e-20,15;UBERON:0000179,2.67e-20,15;UBERON:0000463,2.67e-20,15;UBERON:0004177,1.58e-11,7;UBERON:0005057,1.58e-11,7;UBERON:0002193,1.71e-11,108;UBERON:0002390,3.60e-11,98;UBERON:0003061,3.60e-11,98;UBERON:0002106,1.58e-07,3;UBERON:0004854,1.58e-07,3;UBERON:0009034,1.58e-07,3;UBERON:0002095,1.58e-07,3;UBERON:0004782,1.58e-07,3;UBERON:0003281,1.58e-07,3;UBERON:0009664,1.58e-07,3;UBERON:0002296,1.58e-07,3;UBERON:0005602,1.58e-07,3;UBERON:0001179,1.58e-07,3;UBERON:0006293,1.58e-07,3 | |||
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|short_description=p2@PASK | |||
}} |
Revision as of 17:49, 12 September 2013
Short description: | p2@PASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PASK_5end |
Coexpression cluster: | C1224_CD4_xeroderma_splenic_CD8_Peripheral_Natural_lymph |
Association with transcript: | -135bp_to_ENST00000475666_5end |
EntrezGene: | PASK |
HGNC: | 17270 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.68e-37 | 18 |
alpha-beta T cell | 1.68e-37 | 18 |
immature T cell | 1.68e-37 | 18 |
mature T cell | 1.68e-37 | 18 |
immature alpha-beta T cell | 1.68e-37 | 18 |
T cell | 1.45e-28 | 25 |
pro-T cell | 1.45e-28 | 25 |
lymphoid lineage restricted progenitor cell | 3.63e-27 | 52 |
lymphocyte | 1.68e-26 | 53 |
common lymphoid progenitor | 1.68e-26 | 53 |
leukocyte | 2.09e-26 | 136 |
CD8-positive, alpha-beta T cell | 5.26e-26 | 11 |
nongranular leukocyte | 5.49e-23 | 115 |
hematopoietic stem cell | 6.34e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 1.68e-17 | 120 |
hematopoietic cell | 2.54e-17 | 177 |
hematopoietic oligopotent progenitor cell | 8.58e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.58e-17 | 161 |
CD4-positive, alpha-beta T cell | 1.32e-15 | 6 |
granulocyte | 1.42e-12 | 8 |
blood cell | 7.47e-09 | 11 |
single nucleate cell | 1.71e-08 | 3 |
mononuclear cell | 1.71e-08 | 3 |
naive T cell | 2.19e-08 | 3 |
natural killer cell | 2.72e-08 | 3 |
pro-NK cell | 2.72e-08 | 3 |
basophil | 3.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.67e-20 | 15 |
haemolymphatic fluid | 2.67e-20 | 15 |
organism substance | 2.67e-20 | 15 |
hemopoietic organ | 1.58e-11 | 7 |
immune organ | 1.58e-11 | 7 |
hemolymphoid system | 1.71e-11 | 108 |
hematopoietic system | 3.60e-11 | 98 |
blood island | 3.60e-11 | 98 |
spleen | 1.58e-07 | 3 |
gastrointestinal system mesentery | 1.58e-07 | 3 |
stomach region | 1.58e-07 | 3 |
mesentery | 1.58e-07 | 3 |
gastrointestinal system serosa | 1.58e-07 | 3 |
mesentery of stomach | 1.58e-07 | 3 |
gut mesentery | 1.58e-07 | 3 |
dorsal mesentery | 1.58e-07 | 3 |
dorsal mesogastrium | 1.58e-07 | 3 |
peritoneal cavity | 1.58e-07 | 3 |
spleen primordium | 1.58e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.