FFCP PHASE1:Mm9::chr10:69250179..69250206,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1526|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:69250179..69250206,+|id=chr10:69250179..69250206,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,4.34e-08,2;CL:0000328,4.34e-08,2;CL:0002573,4.34e-08,2;CL:0002376,4.34e-08,2;CL:0000218,4.34e-08,2;CL:0000692,4.34e-08,2;CL:0002377,4.34e-08,2;CL:0002375,4.34e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.61e-10!18;UBERON:0000948!8.61e-10!18;UBERON:0005498!8.61e-10!18;UBERON:0004140!8.61e-10!18;UBERON:0009881!8.61e-10!18;UBERON:0004141!8.61e-10!18;UBERON:0003084!8.61e-10!18;UBERON:0007005!8.61e-10!18;UBERON:0004139!8.61e-10!18;UBERON:0004291!8.61e-10!18;UBERON:0000020!9.56e-10!12;UBERON:0001032!9.56e-10!12;UBERON:0004456!9.56e-10!12;UBERON:0000970!1.00e-08!9;UBERON:0000019!1.00e-08!9;UBERON:0000047!1.00e-08!9;UBERON:0004088!1.00e-08!9;UBERON:0002104!1.00e-08!9;UBERON:0001456!1.00e-08!9;UBERON:0003072!1.00e-08!9;UBERON:0003071!1.00e-08!9;UBERON:0004128!1.00e-08!9;UBERON:0001444!2.52e-08!11;UBERON:0004535!5.51e-08!23;UBERON:0001009!5.51e-08!23;UBERON:0005085!6.67e-07!13;UBERON:0004872!9.80e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0001444,3.32e-20,11;UBERON:0000970,2.98e-19,9;UBERON:0000019,2.98e-19,9;UBERON:0000047,2.98e-19,9;UBERON:0010312,2.98e-19,9;UBERON:0004088,2.98e-19,9;UBERON:0002104,2.98e-19,9;UBERON:0001456,2.98e-19,9;UBERON:0003072,2.98e-19,9;UBERON:0004128,2.98e-19,9;UBERON:0003071,2.98e-19,9;UBERON:0000020,2.02e-18,12;UBERON:0001032,2.02e-18,12;UBERON:0004456,2.02e-18,12;UBERON:0000033,6.52e-17,13;UBERON:0007100,1.48e-13,18;UBERON:0000948,1.48e-13,18;UBERON:0005498,1.48e-13,18;UBERON:0004140,1.48e-13,18;UBERON:0009881,1.48e-13,18;UBERON:0004141,1.48e-13,18;UBERON:0003084,1.48e-13,18;UBERON:0007005,1.48e-13,18;UBERON:0004139,1.48e-13,18;UBERON:0004291,1.48e-13,18;UBERON:0005085,4.76e-13,13;UBERON:0004535,2.62e-10,23;UBERON:0001009,2.62e-10,23;UBERON:0010314,4.69e-10,92;UBERON:0003103,1.75e-07,43;UBERON:0004872,9.12e-07,33|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,1.21161909333094,3.70300644523249,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,1.75668478206928,0.628340120440365,0.255457055208591,0,0,0,0.299581278809645,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.486723789203273,0,0,0,1.68353484709179,0.650602214813519,0.459804208866946,1.62055916824814,1.80845781402858,2.72145996605311,2.17793324484245,1.3118241438362,6.98499100995342,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,1.24275463521301,1.40715635988658,1.98068267607116,1.18372367792605,1.37734962223183,0.462801338662135,1.16266972375204,0.536546802799238,1.16765342367169,0.16455984991348,0.656669856316381,1.29710095273369,1.02339991197733,0.658650345873152,0.939444931322602,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.937693492737625,0,3.28212205365685,0,0,0,0,0.445597348164788,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.301564624640779,0.358117032009409,0,1.1659233465194,1.29797711407357,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.269728692769641,0.495920734352016,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,1.58711268530648,0,0,0,0.579568782096571,0,0.915758121336325,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0,0,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.407412341537585,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.859484216193193,0,1.54413993383661,2.08681052058379|short_description=p@chr10:69250179..69250206,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1526 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:69250179..69250206,+ | |||
|id=chr10:69250179..69250206,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,4.34e-08,2;CL:0000328,4.34e-08,2;CL:0002573,4.34e-08,2;CL:0002376,4.34e-08,2;CL:0000218,4.34e-08,2;CL:0000692,4.34e-08,2;CL:0002377,4.34e-08,2;CL:0002375,4.34e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.61e-10!18;UBERON:0000948!8.61e-10!18;UBERON:0005498!8.61e-10!18;UBERON:0004140!8.61e-10!18;UBERON:0009881!8.61e-10!18;UBERON:0004141!8.61e-10!18;UBERON:0003084!8.61e-10!18;UBERON:0007005!8.61e-10!18;UBERON:0004139!8.61e-10!18;UBERON:0004291!8.61e-10!18;UBERON:0000020!9.56e-10!12;UBERON:0001032!9.56e-10!12;UBERON:0004456!9.56e-10!12;UBERON:0000970!1.00e-08!9;UBERON:0000019!1.00e-08!9;UBERON:0000047!1.00e-08!9;UBERON:0004088!1.00e-08!9;UBERON:0002104!1.00e-08!9;UBERON:0001456!1.00e-08!9;UBERON:0003072!1.00e-08!9;UBERON:0003071!1.00e-08!9;UBERON:0004128!1.00e-08!9;UBERON:0001444!2.52e-08!11;UBERON:0004535!5.51e-08!23;UBERON:0001009!5.51e-08!23;UBERON:0005085!6.67e-07!13;UBERON:0004872!9.80e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001444,3.32e-20,11;UBERON:0000970,2.98e-19,9;UBERON:0000019,2.98e-19,9;UBERON:0000047,2.98e-19,9;UBERON:0010312,2.98e-19,9;UBERON:0004088,2.98e-19,9;UBERON:0002104,2.98e-19,9;UBERON:0001456,2.98e-19,9;UBERON:0003072,2.98e-19,9;UBERON:0004128,2.98e-19,9;UBERON:0003071,2.98e-19,9;UBERON:0000020,2.02e-18,12;UBERON:0001032,2.02e-18,12;UBERON:0004456,2.02e-18,12;UBERON:0000033,6.52e-17,13;UBERON:0007100,1.48e-13,18;UBERON:0000948,1.48e-13,18;UBERON:0005498,1.48e-13,18;UBERON:0004140,1.48e-13,18;UBERON:0009881,1.48e-13,18;UBERON:0004141,1.48e-13,18;UBERON:0003084,1.48e-13,18;UBERON:0007005,1.48e-13,18;UBERON:0004139,1.48e-13,18;UBERON:0004291,1.48e-13,18;UBERON:0005085,4.76e-13,13;UBERON:0004535,2.62e-10,23;UBERON:0001009,2.62e-10,23;UBERON:0010314,4.69e-10,92;UBERON:0003103,1.75e-07,43;UBERON:0004872,9.12e-07,33 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0.383062014255563,0.614426133024974,0,0,0,0.279182999001381,0,0.15279824777681,0,0.142371680799103,0,1.21161909333094,3.70300644523249,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,1.75668478206928,0.628340120440365,0.255457055208591,0,0,0,0.299581278809645,0.915001205637253,0,0.173824320192276,0,0.20778804455956,0.486723789203273,0,0,0,1.68353484709179,0.650602214813519,0.459804208866946,1.62055916824814,1.80845781402858,2.72145996605311,2.17793324484245,1.3118241438362,6.98499100995342,0.215567992932842,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,1.24275463521301,1.40715635988658,1.98068267607116,1.18372367792605,1.37734962223183,0.462801338662135,1.16266972375204,0.536546802799238,1.16765342367169,0.16455984991348,0.656669856316381,1.29710095273369,1.02339991197733,0.658650345873152,0.939444931322602,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.963303539926752,0.937693492737625,0,3.28212205365685,0,0,0,0,0.445597348164788,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0.948110273807448,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.301564624640779,0.358117032009409,0,1.1659233465194,1.29797711407357,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.269728692769641,0.495920734352016,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,1.58711268530648,0,0,0,0.579568782096571,0,0.915758121336325,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.207574695168353,0,0,0,0,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0,0,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.407412341537585,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.859484216193193,0,1.54413993383661,2.08681052058379 | |||
|short_description=p@chr10:69250179..69250206,+ | |||
}} |
Revision as of 17:15, 12 September 2013
Short description: | p@chr10:69250179..69250206, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:69250179..69250206, + |
Coexpression cluster: | MCL_coexpression_mm9:1526 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 4.34e-08 | 2 |
myelin accumulating cell | 4.34e-08 | 2 |
Schwann cell | 4.34e-08 | 2 |
non-myelinating Schwann cell | 4.34e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 4.34e-08 | 2 |
terminal Schwann cell | 4.34e-08 | 2 |
immature Schwann cell | 4.34e-08 | 2 |
Schwann cell precursor | 4.34e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
subdivision of head | 3.32e-20 | 11 |
eye | 2.98e-19 | 9 |
camera-type eye | 2.98e-19 | 9 |
simple eye | 2.98e-19 | 9 |
immature eye | 2.98e-19 | 9 |
ocular region | 2.98e-19 | 9 |
visual system | 2.98e-19 | 9 |
face | 2.98e-19 | 9 |
optic cup | 2.98e-19 | 9 |
optic vesicle | 2.98e-19 | 9 |
eye primordium | 2.98e-19 | 9 |
sense organ | 2.02e-18 | 12 |
sensory system | 2.02e-18 | 12 |
entire sense organ system | 2.02e-18 | 12 |
head | 6.52e-17 | 13 |
primary circulatory organ | 1.48e-13 | 18 |
heart | 1.48e-13 | 18 |
primitive heart tube | 1.48e-13 | 18 |
primary heart field | 1.48e-13 | 18 |
anterior lateral plate mesoderm | 1.48e-13 | 18 |
heart tube | 1.48e-13 | 18 |
heart primordium | 1.48e-13 | 18 |
cardiac mesoderm | 1.48e-13 | 18 |
cardiogenic plate | 1.48e-13 | 18 |
heart rudiment | 1.48e-13 | 18 |
ectodermal placode | 4.76e-13 | 13 |
cardiovascular system | 2.62e-10 | 23 |
circulatory system | 2.62e-10 | 23 |
structure with developmental contribution from neural crest | 4.69e-10 | 92 |
compound organ | 1.75e-07 | 43 |
splanchnic layer of lateral plate mesoderm | 9.12e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.