FFCP PHASE1:Hg19::chr2:223288634..223288698,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=130367|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=19953|TSSclassifier=S|UniProt=Q8IWX5|association_with_transcript=-72bp_to_AK096323_5end|coexpression_cluster_id=C817|description=CAGE_peak_2_at_SGPP2_5end|id=chr2:223288634..223288698,+|ontology_enrichment_celltype=CL:0002087!2.24e-23!119;CL:0000738!1.27e-21!140;CL:0002194!1.65e-19!63;CL:0000576!1.65e-19!63;CL:0000040!1.65e-19!63;CL:0000559!1.65e-19!63;CL:0002031!2.67e-19!124;CL:0002009!3.11e-19!65;CL:0002057!3.66e-18!42;CL:0000766!5.97e-18!76;CL:0000557!3.68e-16!71;CL:0000860!4.63e-16!45;CL:0000839!7.19e-16!70;CL:0002032!5.47e-13!165;CL:0000837!5.47e-13!165;CL:0000988!1.25e-12!182;CL:0000037!1.31e-12!172;CL:0000566!1.31e-12!172;CL:0000763!3.75e-08!112;CL:0000049!3.75e-08!112|ontology_enrichment_celltype_v019=CL:0000473;3.61e-26;39!CL:0000234;3.61e-26;39!CL:0000860;3.83e-26;33!CL:0002057;3.83e-26;33!CL:0000576;1.16e-18;48!CL:0000766;3.45e-13;69!CL:0002087;2.79e-11;104!CL:0000235;2.00e-07;6!CL:0000738;2.18e-07;136|ontology_enrichment_celltype_v019_2=CL:0002194,3.95e-34,59;CL:0000576,3.95e-34,59;CL:0000040,3.95e-34,59;CL:0000559,3.95e-34,59;CL:0002087,5.62e-34,115;CL:0000473,2.15e-33,48;CL:0000234,2.15e-33,48;CL:0002009,1.21e-32,61;CL:0000839,2.50e-29,66;CL:0000766,3.04e-29,72;CL:0002031,5.27e-29,120;CL:0000738,9.27e-29,136;CL:0000557,1.00e-28,67;CL:0000860,2.28e-27,42;CL:0002057,2.28e-27,42;CL:0000988,9.25e-22,177;CL:0002032,8.88e-21,161;CL:0000837,8.88e-21,161;CL:0000037,3.23e-20,168;CL:0000763,1.02e-15,108;CL:0000049,1.02e-15,108;CL:0000235,1.23e-07,6|ontology_enrichment_development_v019=CL:0002057;1.41e-20;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.92e-18!115;UBERON:0002390!7.65e-15!102;UBERON:0003061!7.65e-15!102;UBERON:0002193!1.02e-13!112;UBERON:0002371!1.61e-12!80;UBERON:0001049!1.25e-11!57;UBERON:0005068!1.25e-11!57;UBERON:0006241!1.25e-11!57;UBERON:0007135!1.25e-11!57;UBERON:0001474!1.39e-10!86;UBERON:0002780!3.59e-10!41;UBERON:0001890!3.59e-10!41;UBERON:0006240!3.59e-10!41;UBERON:0003080!1.03e-09!42;UBERON:0002616!1.79e-09!59;UBERON:0002020!9.45e-09!34;UBERON:0003528!9.45e-09!34;UBERON:0001869!9.70e-09!32;UBERON:0002405!1.00e-08!115;UBERON:0001893!1.13e-08!34;UBERON:0003075!3.15e-08!86;UBERON:0007284!3.15e-08!86;UBERON:0002791!3.56e-08!33;UBERON:0004765!6.39e-08!101;UBERON:0001434!6.39e-08!101;UBERON:0000153!1.18e-07!129;UBERON:0007811!1.18e-07!129;UBERON:0003056!2.03e-07!61;UBERON:0000062!2.21e-07!511;UBERON:0002346!2.62e-07!90;UBERON:0000956!4.59e-07!25;UBERON:0000203!4.59e-07!25;UBERON:0000955!6.21e-07!69;UBERON:0006238!6.21e-07!69;UBERON:0002619!6.95e-07!22|ontology_enrichment_uberon_v019=UBERON:0002113;4.68e-07;24!UBERON:0011143;4.68e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.35e-26,98;UBERON:0003061,9.35e-26,98;UBERON:0002371,5.14e-24,76;UBERON:0002193,1.81e-23,108;UBERON:0002405,5.81e-23,93;UBERON:0001474,1.85e-21,82;UBERON:0004765,1.35e-18,90;UBERON:0001434,1.00e-16,100;UBERON:0003081,6.26e-08,203;UBERON:0002113,9.44e-08,26;UBERON:0003918,9.44e-08,26;UBERON:0011143,9.44e-08,26;UBERON:0005095,9.44e-08,26;UBERON:0007687,9.44e-08,26;UBERON:0000489,3.20e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.502170558379211,27.3559992577666,31.2803245804293,32.6649742451769,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0.369754010166788,0,3.41206157969812,0,7.75593571944628,3.60980005446255,3.68918480216948,1.79132379391939,2.91504299417082,3.8636335145128,0.726991193897824,0.377875943688809,0.970336244751265,7.67015821788759,9.04569353648017,11.1494293522237,4.02769349251011,3.33008918487831,2.60130452877444,7.92915065694223,13.5551783552603,5.41705946377367,2.82363509313907,1.91034305040492,5.61808711112712,9.18251677112708,6.73950956859797,5.75403413219137,0,0.598390972864896,0,36.5663640672016,31.2061873580127,23.0444232128363,1.25624332628372,1.0429658368404,1.52032191293582,27.848377121135,19.5187147073409,21.2029799585393,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,0,2.24203425192614,0,1.180258620683,1.17903228824749,1.02800749499755,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,1.37450978193052,1.26509846009751,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.087834785693126,0.523916301990851,0.728590576585084,0,1.29818957461873,0.696518949197069,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,1.72082757233402,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=130367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19953 | |||
|TSSclassifier=S | |||
|UniProt=Q8IWX5 | |||
|association_with_transcript=-72bp_to_AK096323_5end | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_2_at_SGPP2_5end | |||
|id=chr2:223288634..223288698,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.24e-23!119;CL:0000738!1.27e-21!140;CL:0002194!1.65e-19!63;CL:0000576!1.65e-19!63;CL:0000040!1.65e-19!63;CL:0000559!1.65e-19!63;CL:0002031!2.67e-19!124;CL:0002009!3.11e-19!65;CL:0002057!3.66e-18!42;CL:0000766!5.97e-18!76;CL:0000557!3.68e-16!71;CL:0000860!4.63e-16!45;CL:0000839!7.19e-16!70;CL:0002032!5.47e-13!165;CL:0000837!5.47e-13!165;CL:0000988!1.25e-12!182;CL:0000037!1.31e-12!172;CL:0000566!1.31e-12!172;CL:0000763!3.75e-08!112;CL:0000049!3.75e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.61e-26;39!CL:0000234;3.61e-26;39!CL:0000860;3.83e-26;33!CL:0002057;3.83e-26;33!CL:0000576;1.16e-18;48!CL:0000766;3.45e-13;69!CL:0002087;2.79e-11;104!CL:0000235;2.00e-07;6!CL:0000738;2.18e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.95e-34,59;CL:0000576,3.95e-34,59;CL:0000040,3.95e-34,59;CL:0000559,3.95e-34,59;CL:0002087,5.62e-34,115;CL:0000473,2.15e-33,48;CL:0000234,2.15e-33,48;CL:0002009,1.21e-32,61;CL:0000839,2.50e-29,66;CL:0000766,3.04e-29,72;CL:0002031,5.27e-29,120;CL:0000738,9.27e-29,136;CL:0000557,1.00e-28,67;CL:0000860,2.28e-27,42;CL:0002057,2.28e-27,42;CL:0000988,9.25e-22,177;CL:0002032,8.88e-21,161;CL:0000837,8.88e-21,161;CL:0000037,3.23e-20,168;CL:0000763,1.02e-15,108;CL:0000049,1.02e-15,108;CL:0000235,1.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.92e-18!115;UBERON:0002390!7.65e-15!102;UBERON:0003061!7.65e-15!102;UBERON:0002193!1.02e-13!112;UBERON:0002371!1.61e-12!80;UBERON:0001049!1.25e-11!57;UBERON:0005068!1.25e-11!57;UBERON:0006241!1.25e-11!57;UBERON:0007135!1.25e-11!57;UBERON:0001474!1.39e-10!86;UBERON:0002780!3.59e-10!41;UBERON:0001890!3.59e-10!41;UBERON:0006240!3.59e-10!41;UBERON:0003080!1.03e-09!42;UBERON:0002616!1.79e-09!59;UBERON:0002020!9.45e-09!34;UBERON:0003528!9.45e-09!34;UBERON:0001869!9.70e-09!32;UBERON:0002405!1.00e-08!115;UBERON:0001893!1.13e-08!34;UBERON:0003075!3.15e-08!86;UBERON:0007284!3.15e-08!86;UBERON:0002791!3.56e-08!33;UBERON:0004765!6.39e-08!101;UBERON:0001434!6.39e-08!101;UBERON:0000153!1.18e-07!129;UBERON:0007811!1.18e-07!129;UBERON:0003056!2.03e-07!61;UBERON:0000062!2.21e-07!511;UBERON:0002346!2.62e-07!90;UBERON:0000956!4.59e-07!25;UBERON:0000203!4.59e-07!25;UBERON:0000955!6.21e-07!69;UBERON:0006238!6.21e-07!69;UBERON:0002619!6.95e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.68e-07;24!UBERON:0011143;4.68e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.35e-26,98;UBERON:0003061,9.35e-26,98;UBERON:0002371,5.14e-24,76;UBERON:0002193,1.81e-23,108;UBERON:0002405,5.81e-23,93;UBERON:0001474,1.85e-21,82;UBERON:0004765,1.35e-18,90;UBERON:0001434,1.00e-16,100;UBERON:0003081,6.26e-08,203;UBERON:0002113,9.44e-08,26;UBERON:0003918,9.44e-08,26;UBERON:0011143,9.44e-08,26;UBERON:0005095,9.44e-08,26;UBERON:0007687,9.44e-08,26;UBERON:0000489,3.20e-07,31 | |||
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| |||
|short_description=p2@SGPP2 | |||
}} |
Revision as of 17:04, 12 September 2013
Short description: | p2@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SGPP2_5end |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | -72bp_to_AK096323_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.95e-34 | 59 |
monocyte | 3.95e-34 | 59 |
monoblast | 3.95e-34 | 59 |
promonocyte | 3.95e-34 | 59 |
nongranular leukocyte | 5.62e-34 | 115 |
defensive cell | 2.15e-33 | 48 |
phagocyte | 2.15e-33 | 48 |
macrophage dendritic cell progenitor | 1.21e-32 | 61 |
myeloid lineage restricted progenitor cell | 2.50e-29 | 66 |
myeloid leukocyte | 3.04e-29 | 72 |
hematopoietic lineage restricted progenitor cell | 5.27e-29 | 120 |
leukocyte | 9.27e-29 | 136 |
granulocyte monocyte progenitor cell | 1.00e-28 | 67 |
classical monocyte | 2.28e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-27 | 42 |
hematopoietic cell | 9.25e-22 | 177 |
hematopoietic oligopotent progenitor cell | 8.88e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.88e-21 | 161 |
hematopoietic stem cell | 3.23e-20 | 168 |
myeloid cell | 1.02e-15 | 108 |
common myeloid progenitor | 1.02e-15 | 108 |
macrophage | 1.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.35e-26 | 98 |
blood island | 9.35e-26 | 98 |
bone marrow | 5.14e-24 | 76 |
hemolymphoid system | 1.81e-23 | 108 |
immune system | 5.81e-23 | 93 |
bone element | 1.85e-21 | 82 |
skeletal element | 1.35e-18 | 90 |
skeletal system | 1.00e-16 | 100 |
lateral plate mesoderm | 6.26e-08 | 203 |
kidney | 9.44e-08 | 26 |
kidney mesenchyme | 9.44e-08 | 26 |
upper urinary tract | 9.44e-08 | 26 |
kidney rudiment | 9.44e-08 | 26 |
kidney field | 9.44e-08 | 26 |
cavitated compound organ | 3.20e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.