FFCP PHASE1:Hg19::chr2:208394455..208394471,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1385|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2345|TSSclassifier=S|UniProt=F8W746|association_with_transcript=0bp_to_ENST00000236996,ENST00000430624_5end|coexpression_cluster_id=C0|description=CAGE_peak_7_at_CREB1_5end|id=chr2:208394455..208394471,+|ontology_enrichment_celltype=CL:0000738!3.87e-50!140;CL:0002057!2.03e-39!42;CL:0002031!1.62e-38!124;CL:0000766!4.56e-38!76;CL:0002087!1.55e-37!119;CL:0000860!3.32e-37!45;CL:0000988!9.26e-37!182;CL:0000037!1.57e-36!172;CL:0000566!1.57e-36!172;CL:0002032!8.35e-34!165;CL:0000837!8.35e-34!165;CL:0000557!3.20e-31!71;CL:0002009!1.19e-28!65;CL:0000839!1.42e-28!70;CL:0002194!1.06e-26!63;CL:0000576!1.06e-26!63;CL:0000040!1.06e-26!63;CL:0000559!1.06e-26!63;CL:0000763!3.52e-23!112;CL:0000049!3.52e-23!112;CL:0000134!2.68e-12!358;CL:0002320!1.86e-11!365;CL:0000094!2.52e-10!8;CL:0000081!2.99e-10!11;CL:0000542!9.93e-10!53;CL:0000051!9.93e-10!53;CL:0000219!2.96e-09!390;CL:0000838!3.69e-09!52;CL:0002393!7.04e-08!9;CL:0002397!7.04e-08!9;CL:0000063!9.19e-08!578|ontology_enrichment_celltype_v019=CL:0000860;3.76e-58;33!CL:0002057;3.76e-58;33!CL:0000473;1.22e-42;39!CL:0000234;1.22e-42;39!CL:0000766;2.65e-33;69!CL:0000576;1.97e-32;48!CL:0000094;2.34e-25;8!CL:0000081;3.49e-18;11!CL:0000763;1.07e-15;100!CL:0000775;1.26e-13;3!CL:0000738;1.75e-12;136!CL:0002087;4.69e-12;104!CL:0000771;6.91e-10;2!CL:0001014;2.36e-09;2!CL:0001016;2.36e-09;2!CL:0000097;1.48e-08;5!CL:0000988;4.95e-07;177|ontology_enrichment_celltype_v019_2=CL:0000766,1.49e-72,72;CL:0000860,4.97e-63,42;CL:0002057,4.97e-63,42;CL:0000473,1.06e-58,48;CL:0000234,1.06e-58,48;CL:0000557,2.65e-57,67;CL:0000738,9.44e-52,136;CL:0000763,1.35e-51,108;CL:0000049,1.35e-51,108;CL:0002009,3.06e-51,61;CL:0000839,9.81e-51,66;CL:0002194,1.21e-45,59;CL:0000576,1.21e-45,59;CL:0000040,1.21e-45,59;CL:0000559,1.21e-45,59;CL:0002032,2.14e-42,161;CL:0000837,2.14e-42,161;CL:0000037,2.86e-40,168;CL:0002031,3.09e-40,120;CL:0000988,8.78e-38,177;CL:0002087,3.17e-30,115;CL:0000094,2.27e-25,8;CL:0000081,3.42e-18,11;CL:0000134,1.91e-16,354;CL:0002320,5.99e-16,361;CL:0000219,3.39e-14,386;CL:0000775,1.32e-13,3;CL:0000048,4.76e-12,427;CL:0000723,9.41e-12,433;CL:0000034,2.27e-11,441;CL:0000771,5.32e-10,2;CL:0001014,2.13e-09,2;CL:0001016,2.13e-09,2;CL:0000097,1.67e-08,5;CL:0002028,1.67e-08,5|ontology_enrichment_development_v019=CL:0002057;1.07e-46;42!CL:0000049;1.90e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.36e-31!102;UBERON:0003061!3.36e-31!102;UBERON:0002193!1.66e-30!112;UBERON:0002371!8.04e-27!80;UBERON:0001474!1.23e-23!86;UBERON:0002405!1.52e-21!115;UBERON:0004765!2.50e-20!101;UBERON:0001434!2.50e-20!101;UBERON:0002384!4.01e-11!375;UBERON:0003081!9.05e-09!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.00e-49,76;UBERON:0001474,1.38e-45,82;UBERON:0004765,6.44e-41,90;UBERON:0002390,1.59e-39,98;UBERON:0003061,1.59e-39,98;UBERON:0002405,2.26e-39,93;UBERON:0001434,4.03e-36,100;UBERON:0002193,3.40e-35,108;UBERON:0002204,9.97e-19,167;UBERON:0003081,1.84e-16,203;UBERON:0002384,2.86e-15,371;UBERON:0000926,6.26e-08,315;UBERON:0004120,6.26e-08,315;UBERON:0006603,6.26e-08,315|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0.786728553697808,1.15148819429164,1.54816123316076,0,0.30120591877825,0,0.0774672005803016,0,0.293600439334847,0,1.20326668482085,1.30206522429511,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,3.0215774797739,1.6446715520873,2.78735733805593,0.28769239232215,0.768482119587302,1.18241114944293,4.82643953031266,5.80936215225443,5.41705946377367,1.12945403725563,1.91034305040492,2.24723484445085,3.97909060082173,3.53021929783703,4.47535988059329,0.659702600373432,1.39624560335142,0,6.09439401120026,7.37600792098482,5.60540024096017,1.7587406567972,1.5644487552606,1.73751075764093,3.02699751316684,4.05105399586321,3.79754864929061,0.633765858935825,1.06302149982522,0.628975936525128,0.112328631146495,0.450530678524519,0.16072558669708,0.570025487482497,0.99458338599545,0.730656615058536,1.75996244461323,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0,1.90810750907073,0,0,1.91136614062614,0,0.560508562981536,0,0.786839080455332,0.786021525498329,0.616804496998528,0,0.32592226663359,0,0,0.222820913770347,0.883817722424512,0.664601683750863,0,0.25618263945135,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.604820229674197,0.802320587350522,0.579297615531196,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,3.9534125230819,3.87780264148325,0,0,0.12663051166458,0,0,0,0,0,0.4933350968343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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1385 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2345 | |||
|TSSclassifier=S | |||
|UniProt=F8W746 | |||
|association_with_transcript=0bp_to_ENST00000236996,ENST00000430624_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_7_at_CREB1_5end | |||
|id=chr2:208394455..208394471,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.87e-50!140;CL:0002057!2.03e-39!42;CL:0002031!1.62e-38!124;CL:0000766!4.56e-38!76;CL:0002087!1.55e-37!119;CL:0000860!3.32e-37!45;CL:0000988!9.26e-37!182;CL:0000037!1.57e-36!172;CL:0000566!1.57e-36!172;CL:0002032!8.35e-34!165;CL:0000837!8.35e-34!165;CL:0000557!3.20e-31!71;CL:0002009!1.19e-28!65;CL:0000839!1.42e-28!70;CL:0002194!1.06e-26!63;CL:0000576!1.06e-26!63;CL:0000040!1.06e-26!63;CL:0000559!1.06e-26!63;CL:0000763!3.52e-23!112;CL:0000049!3.52e-23!112;CL:0000134!2.68e-12!358;CL:0002320!1.86e-11!365;CL:0000094!2.52e-10!8;CL:0000081!2.99e-10!11;CL:0000542!9.93e-10!53;CL:0000051!9.93e-10!53;CL:0000219!2.96e-09!390;CL:0000838!3.69e-09!52;CL:0002393!7.04e-08!9;CL:0002397!7.04e-08!9;CL:0000063!9.19e-08!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.76e-58;33!CL:0002057;3.76e-58;33!CL:0000473;1.22e-42;39!CL:0000234;1.22e-42;39!CL:0000766;2.65e-33;69!CL:0000576;1.97e-32;48!CL:0000094;2.34e-25;8!CL:0000081;3.49e-18;11!CL:0000763;1.07e-15;100!CL:0000775;1.26e-13;3!CL:0000738;1.75e-12;136!CL:0002087;4.69e-12;104!CL:0000771;6.91e-10;2!CL:0001014;2.36e-09;2!CL:0001016;2.36e-09;2!CL:0000097;1.48e-08;5!CL:0000988;4.95e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.49e-72,72;CL:0000860,4.97e-63,42;CL:0002057,4.97e-63,42;CL:0000473,1.06e-58,48;CL:0000234,1.06e-58,48;CL:0000557,2.65e-57,67;CL:0000738,9.44e-52,136;CL:0000763,1.35e-51,108;CL:0000049,1.35e-51,108;CL:0002009,3.06e-51,61;CL:0000839,9.81e-51,66;CL:0002194,1.21e-45,59;CL:0000576,1.21e-45,59;CL:0000040,1.21e-45,59;CL:0000559,1.21e-45,59;CL:0002032,2.14e-42,161;CL:0000837,2.14e-42,161;CL:0000037,2.86e-40,168;CL:0002031,3.09e-40,120;CL:0000988,8.78e-38,177;CL:0002087,3.17e-30,115;CL:0000094,2.27e-25,8;CL:0000081,3.42e-18,11;CL:0000134,1.91e-16,354;CL:0002320,5.99e-16,361;CL:0000219,3.39e-14,386;CL:0000775,1.32e-13,3;CL:0000048,4.76e-12,427;CL:0000723,9.41e-12,433;CL:0000034,2.27e-11,441;CL:0000771,5.32e-10,2;CL:0001014,2.13e-09,2;CL:0001016,2.13e-09,2;CL:0000097,1.67e-08,5;CL:0002028,1.67e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-46;42!CL:0000049;1.90e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.36e-31!102;UBERON:0003061!3.36e-31!102;UBERON:0002193!1.66e-30!112;UBERON:0002371!8.04e-27!80;UBERON:0001474!1.23e-23!86;UBERON:0002405!1.52e-21!115;UBERON:0004765!2.50e-20!101;UBERON:0001434!2.50e-20!101;UBERON:0002384!4.01e-11!375;UBERON:0003081!9.05e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.00e-49,76;UBERON:0001474,1.38e-45,82;UBERON:0004765,6.44e-41,90;UBERON:0002390,1.59e-39,98;UBERON:0003061,1.59e-39,98;UBERON:0002405,2.26e-39,93;UBERON:0001434,4.03e-36,100;UBERON:0002193,3.40e-35,108;UBERON:0002204,9.97e-19,167;UBERON:0003081,1.84e-16,203;UBERON:0002384,2.86e-15,371;UBERON:0000926,6.26e-08,315;UBERON:0004120,6.26e-08,315;UBERON:0006603,6.26e-08,315 | |||
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| |||
|short_description=p7@CREB1 | |||
}} |
Revision as of 16:15, 12 September 2013
Short description: | p7@CREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CREB1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000236996, ENST00000430624_5end |
EntrezGene: | CREB1 |
HGNC: | 2345 |
UniProt: | F8W746 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.00e-49 | 76 |
bone element | 1.38e-45 | 82 |
skeletal element | 6.44e-41 | 90 |
hematopoietic system | 1.59e-39 | 98 |
blood island | 1.59e-39 | 98 |
immune system | 2.26e-39 | 93 |
skeletal system | 4.03e-36 | 100 |
hemolymphoid system | 3.40e-35 | 108 |
musculoskeletal system | 9.97e-19 | 167 |
lateral plate mesoderm | 1.84e-16 | 203 |
connective tissue | 2.86e-15 | 371 |
mesoderm | 6.26e-08 | 315 |
mesoderm-derived structure | 6.26e-08 | 315 |
presumptive mesoderm | 6.26e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.