FFCP PHASE1:Mm9::chr10:128002960..128003055,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18813|HGNC=|MCL_coexpression_id=1499|UniProt=P50580,Q3TGU7|association_with_transcript=0bp_to_ENSMUST00000026425,NM_011119,uc007hnl.1_5end|description=CAGE_peak_1_at_Pa2g4_5end|id=chr10:128002960..128003055,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001041!5.66e-09!92;UBERON:0000077!2.21e-08!97;UBERON:0005057!4.87e-08!51;UBERON:0004177!1.73e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.73e-07,29;UBERON:0005057,1.73e-07,29|phase1_expression=120.912379564119,65.2584012285605,52.3249125297966,51.4189159221611,48.0859900748493,157.974394869088,160.491884089126,114.403264569237,353.520481322835,357.182467167362,638.814239449359,740.445179794713,94.5028029220256,91.2669001254333,298.799456348649,260.180718595926,224.559362879135,124.923017481862,116.547268564878,96.7608406099509,104.94342004642,258.752218829507,233.773811279347,136.153551797189,120.669281841331,72.3532274784925,96.0599251434737,130.360095774963,111.353723801435,119.714311635967,160.754620225096,245.756870628877,208.506962991169,126.785344812351,273.253632284706,319.835457669739,297.474752074272,59.4314915646409,121.106978401189,83.7637990358077,25.8821854733646,24.589637458504,33.5002143591496,213.646900104555,189.169353655614,191.439262504634,61.8089162034951,114.245181943354,94.0256862103539,99.3536784269588,144.186014274123,112.127000204678,125.836954543302,108.804321301702,159.308460793528,116.538524524284,97.9944364590548,63.9433394424028,151.13039626212,160.284266719426,146.415054209927,110.463317454537,94.2652483877808,56.6936821887281,38.565788140112,46.1812074714965,51.5312190091656,58.0169641035547,178.242443558273,181.312975179461,178.776217148675,79.982275633065,100.495186132984,195.617806346282,209.038972290774,159.944068870144,71.5753226496027,68.1850385374902,76.4960535616092,159.450521865804,166.69048664359,176.068719248185,66.72473676133,86.6654419448787,70.2871939773326,94.2811473515737,111.477026065698,145.205168297909,303.813487652734,197.544058119137,81.1620568364698,100.669593606822,166.592976758399,141.402236209108,141.651259003592,163.977840677625,130.894199562793,311.205769027533,235.106334165596,209.883707259142,128.026668577003,128.326477414318,142.690934235722,85.3280043783997,139.636721452233,133.267289239902,123.853489028622,118.294499388946,199.641108291969,109.550298629841,226.051380776275,182.983752465597,150.36130421095,136.102544419018,130.641053627768,120.639927676488,76.1360500621872,119.005270745087,159.229899350977,170.502259844569,175.348165657552,198.313978532306,141.657738525773,83.7353079453025,68.2796264211864,141.52320858556,404.495860331987,440.928507280155,387.437122345774,82.6844329514621,89.2126175496322,146.136011507261,84.1309709730618,101.007605645481,73.3491797295247,89.0704534241989,150.213061679217,150.034806555772,97.8037075138321,97.6450211313239,258.93968149578,203.693264528057,219.495736232721,188.53172711248,161.042393491193,214.718595197408,158.637019679621,112.535966271472,334.992661017637,226.738190121215,203.575450657689,202.975248227934,208.535436919198,257.010098893359,254.758284873034,176.742428934822,702.213187313235,520.357468185954,395.271427659269,183.513434466455,203.568620063592,187.9847921653,179.689254309175,167.249596985293,161.82620141886,174.400458562806,160.964040839772,137.082511939057,153.863459669104,122.304760738926,114.144883840565,103.070991134859,119.215712603041,104.009974539288,81.3822100943172,161.663146047856,61.1274748520026,209.180398230864,250.6136943789,244.545215469042,251.16268211676,181.111805111762,149.215667419908,158.648172177874,130.020962863196,140.488208379581,132.956325455343,145.437181062081,133.355435589478,164.483951783723,156.267810059404,130.039251435102,271.983769966719,237.179912177797,166.807448796159,180.842379126639,150.701082529245,131.99561303358,99.0284171365869,100.522510774109,96.8682150781283,93.7818445805684,177.871576252289,360.885963663911,400.194114050481,347.187101522214,318.693250701338,265.536052887411,215.668096458863,186.139400930674,224.070883403099,218.550884897713,161.020391310637,174.906245404197,167.252192789404,146.495749209325,181.011990243609,167.407901913088,101.059995021133,260.550691184417,251.943853579372,253.429413062356,199.252020796938,144.055381399962,117.117471315919,88.3955424795829,136.196764507749,124.020226203314,113.053430978158,107.002744509377,102.574879228342,78.8337369269238,67.8560777726725,56.5661911171458,219.818630039509,228.751562686623,85.7340150534809,83.4547208536487,338.525662202835,106.542731280245,213.599064544806,205.370779500032,174.923798959033,205.274197441242,173.337368436103,147.199796010193,185.403301367102,155.480116408818,152.976370065305,78.7237225233427,157.979314836803,163.108092959206,139.919898084722,130.986277640193,230.976540711535,292.065105294443,305.951439648328,294.223924419201,241.261646483591,203.52206793888,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| ||
|EntrezGene=18813 | |||
|HGNC= | |||
|MCL_coexpression_id=1499 | |||
|UniProt=P50580,Q3TGU7 | |||
|association_with_transcript=0bp_to_ENSMUST00000026425,NM_011119,uc007hnl.1_5end | |||
|description=CAGE_peak_1_at_Pa2g4_5end | |||
|id=chr10:128002960..128003055,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001041!5.66e-09!92;UBERON:0000077!2.21e-08!97;UBERON:0005057!4.87e-08!51;UBERON:0004177!1.73e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.73e-07,29;UBERON:0005057,1.73e-07,29 | |||
|phase1_expression=120.912379564119,65.2584012285605,52.3249125297966,51.4189159221611,48.0859900748493,157.974394869088,160.491884089126,114.403264569237,353.520481322835,357.182467167362,638.814239449359,740.445179794713,94.5028029220256,91.2669001254333,298.799456348649,260.180718595926,224.559362879135,124.923017481862,116.547268564878,96.7608406099509,104.94342004642,258.752218829507,233.773811279347,136.153551797189,120.669281841331,72.3532274784925,96.0599251434737,130.360095774963,111.353723801435,119.714311635967,160.754620225096,245.756870628877,208.506962991169,126.785344812351,273.253632284706,319.835457669739,297.474752074272,59.4314915646409,121.106978401189,83.7637990358077,25.8821854733646,24.589637458504,33.5002143591496,213.646900104555,189.169353655614,191.439262504634,61.8089162034951,114.245181943354,94.0256862103539,99.3536784269588,144.186014274123,112.127000204678,125.836954543302,108.804321301702,159.308460793528,116.538524524284,97.9944364590548,63.9433394424028,151.13039626212,160.284266719426,146.415054209927,110.463317454537,94.2652483877808,56.6936821887281,38.565788140112,46.1812074714965,51.5312190091656,58.0169641035547,178.242443558273,181.312975179461,178.776217148675,79.982275633065,100.495186132984,195.617806346282,209.038972290774,159.944068870144,71.5753226496027,68.1850385374902,76.4960535616092,159.450521865804,166.69048664359,176.068719248185,66.72473676133,86.6654419448787,70.2871939773326,94.2811473515737,111.477026065698,145.205168297909,303.813487652734,197.544058119137,81.1620568364698,100.669593606822,166.592976758399,141.402236209108,141.651259003592,163.977840677625,130.894199562793,311.205769027533,235.106334165596,209.883707259142,128.026668577003,128.326477414318,142.690934235722,85.3280043783997,139.636721452233,133.267289239902,123.853489028622,118.294499388946,199.641108291969,109.550298629841,226.051380776275,182.983752465597,150.36130421095,136.102544419018,130.641053627768,120.639927676488,76.1360500621872,119.005270745087,159.229899350977,170.502259844569,175.348165657552,198.313978532306,141.657738525773,83.7353079453025,68.2796264211864,141.52320858556,404.495860331987,440.928507280155,387.437122345774,82.6844329514621,89.2126175496322,146.136011507261,84.1309709730618,101.007605645481,73.3491797295247,89.0704534241989,150.213061679217,150.034806555772,97.8037075138321,97.6450211313239,258.93968149578,203.693264528057,219.495736232721,188.53172711248,161.042393491193,214.718595197408,158.637019679621,112.535966271472,334.992661017637,226.738190121215,203.575450657689,202.975248227934,208.535436919198,257.010098893359,254.758284873034,176.742428934822,702.213187313235,520.357468185954,395.271427659269,183.513434466455,203.568620063592,187.9847921653,179.689254309175,167.249596985293,161.82620141886,174.400458562806,160.964040839772,137.082511939057,153.863459669104,122.304760738926,114.144883840565,103.070991134859,119.215712603041,104.009974539288,81.3822100943172,161.663146047856,61.1274748520026,209.180398230864,250.6136943789,244.545215469042,251.16268211676,181.111805111762,149.215667419908,158.648172177874,130.020962863196,140.488208379581,132.956325455343,145.437181062081,133.355435589478,164.483951783723,156.267810059404,130.039251435102,271.983769966719,237.179912177797,166.807448796159,180.842379126639,150.701082529245,131.99561303358,99.0284171365869,100.522510774109,96.8682150781283,93.7818445805684,177.871576252289,360.885963663911,400.194114050481,347.187101522214,318.693250701338,265.536052887411,215.668096458863,186.139400930674,224.070883403099,218.550884897713,161.020391310637,174.906245404197,167.252192789404,146.495749209325,181.011990243609,167.407901913088,101.059995021133,260.550691184417,251.943853579372,253.429413062356,199.252020796938,144.055381399962,117.117471315919,88.3955424795829,136.196764507749,124.020226203314,113.053430978158,107.002744509377,102.574879228342,78.8337369269238,67.8560777726725,56.5661911171458,219.818630039509,228.751562686623,85.7340150534809,83.4547208536487,338.525662202835,106.542731280245,213.599064544806,205.370779500032,174.923798959033,205.274197441242,173.337368436103,147.199796010193,185.403301367102,155.480116408818,152.976370065305,78.7237225233427,157.979314836803,163.108092959206,139.919898084722,130.986277640193,230.976540711535,292.065105294443,305.951439648328,294.223924419201,241.261646483591,203.52206793888,179.090807165577,218.483771415981,228.514819544606,305.607544923934,268.817451866247,218.647351686156,83.0672638039243,193.565676083658,186.147145963384,151.964957837399,124.847524484161,116.474837894152,120.778981121957,102.300222902505,160.515448315578,76.6832096527029,175.09954805564,224.245304000413,230.571201321753,260.370896914849,263.574135558925,303.824805428108,151.861515884152,83.8122365087504,239.390103997792,187.812049846532,271.124788069258,323.428640677054,361.009455411227,264.925124573153,280.464409489861,312.931447395699,281.78974658722,174.704723096766,258.7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| |||
|short_description=p1@Pa2g4 | |||
}} | |||
Revision as of 16:10, 12 September 2013
| Short description: | p1@Pa2g4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Pa2g4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1499 |
| Association with transcript: | 0bp_to_ENSMUST00000026425, NM_011119, uc007hnl.1_5end |
| EntrezGene: | Pa2g4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemopoietic organ | 1.73e-07 | 29 |
| immune organ | 1.73e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
