FFCP PHASE1:Hg19::chr2:191472552..191472556,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:191472552..191472556,-|id=chr2:191472552..191472556,-|ontology_enrichment_celltype=CL:0000066!4.82e-19!254;CL:0002251!1.51e-17!21;CL:0002076!1.16e-14!43;CL:0000223!7.22e-13!59;CL:0000076!3.49e-08!62;CL:0000622!9.13e-07!5|ontology_enrichment_celltype_v019=CL:1001319;6.31e-21;1!CL:1000600;6.31e-21;1!CL:0000319;6.31e-21;1!CL:0000159;3.70e-11;2!CL:0002535;3.70e-11;2|ontology_enrichment_celltype_v019_2=CL:1001319,5.16e-21,1;CL:1000600,5.16e-21,1;CL:0000319,6.31e-21,1;CL:0002535,3.02e-11,2;CL:0000159,3.70e-11,2;CL:0000076,4.56e-08,63|ontology_enrichment_development_v019=UBERON:0008814;2.35e-11;2!UBERON:0010056;2.35e-11;2|ontology_enrichment_disease=DOID:1749!2.72e-24!14;DOID:305!2.79e-24!106;DOID:0050687!1.41e-18!143;DOID:14566!6.14e-12!239;DOID:162!1.66e-11!235;DOID:7!2.27e-10!39;DOID:4929!4.12e-08!2|ontology_enrichment_disease_v019=DOID:1749;3.74e-23;14!DOID:3030;6.31e-21;1|ontology_enrichment_disease_v019_2=DOID:1749,2.98e-23,14;DOID:3030,6.31e-21,1;DOID:305,5.60e-09,106|ontology_enrichment_uberon=UBERON:0003729!1.04e-17!5;UBERON:0003343!9.17e-15!4;UBERON:0004785!9.17e-15!4;UBERON:0000344!6.95e-14!12;UBERON:0004119!4.81e-12!169;UBERON:0000925!4.81e-12!169;UBERON:0006595!4.81e-12!169;UBERON:0001007!1.49e-09!155;UBERON:0001555!1.49e-09!155;UBERON:0007026!1.49e-09!155;UBERON:0000161!4.60e-08!35;UBERON:0000166!2.93e-07!21;UBERON:0002046!3.84e-07!5;UBERON:0004117!3.84e-07!5;UBERON:0007689!3.84e-07!5;UBERON:0007123!3.84e-07!5;UBERON:0003091!3.84e-07!5|ontology_enrichment_uberon_v019=UBERON:0004645;6.31e-21;1!UBERON:0007195;6.31e-21;1!UBERON:0001256;6.31e-21;1!UBERON:0001259;6.31e-21;1!UBERON:0001255;3.70e-11;2!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2!UBERON:0001556;3.70e-11;2!UBERON:0001723;5.36e-08;3!UBERON:0001033;5.36e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.16e-21,1;UBERON:0001256,5.16e-21,1;UBERON:0001259,5.16e-21,1;UBERON:0007195,9.43e-21,1;UBERON:0006955,3.02e-11,2;UBERON:0004801,3.02e-11,2;UBERON:0001255,3.35e-11,2;UBERON:0001556,3.35e-11,2;UBERON:0001723,4.84e-08,3;UBERON:0001033,4.84e-08,3;UBERON:0010056,4.84e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,2.3365771298305,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,1.65412492502765,0,0,0.0967563312890851,0.292357268344742,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0.320635281006135,0,0.19980960958213,0,0,0,0.432164393964449,0.621262677827163,0,0.67952103036807,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.353909170043221,0.183428598521679,2.65709032145778,0,0,0,0,0,0,0,0.655087670040387,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,1.38385556638657,0,0,0.359300808426348,0,0,0,0,0,0|short_description=p@chr2:191472552..191472556,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:191472552..191472556,- | |||
|id=chr2:191472552..191472556,- | |||
|ontology_enrichment_celltype=CL:0000066!4.82e-19!254;CL:0002251!1.51e-17!21;CL:0002076!1.16e-14!43;CL:0000223!7.22e-13!59;CL:0000076!3.49e-08!62;CL:0000622!9.13e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1001319;6.31e-21;1!CL:1000600;6.31e-21;1!CL:0000319;6.31e-21;1!CL:0000159;3.70e-11;2!CL:0002535;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.16e-21,1;CL:1000600,5.16e-21,1;CL:0000319,6.31e-21,1;CL:0002535,3.02e-11,2;CL:0000159,3.70e-11,2;CL:0000076,4.56e-08,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.35e-11;2!UBERON:0010056;2.35e-11;2 | |||
|ontology_enrichment_disease=DOID:1749!2.72e-24!14;DOID:305!2.79e-24!106;DOID:0050687!1.41e-18!143;DOID:14566!6.14e-12!239;DOID:162!1.66e-11!235;DOID:7!2.27e-10!39;DOID:4929!4.12e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.74e-23;14!DOID:3030;6.31e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.98e-23,14;DOID:3030,6.31e-21,1;DOID:305,5.60e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.04e-17!5;UBERON:0003343!9.17e-15!4;UBERON:0004785!9.17e-15!4;UBERON:0000344!6.95e-14!12;UBERON:0004119!4.81e-12!169;UBERON:0000925!4.81e-12!169;UBERON:0006595!4.81e-12!169;UBERON:0001007!1.49e-09!155;UBERON:0001555!1.49e-09!155;UBERON:0007026!1.49e-09!155;UBERON:0000161!4.60e-08!35;UBERON:0000166!2.93e-07!21;UBERON:0002046!3.84e-07!5;UBERON:0004117!3.84e-07!5;UBERON:0007689!3.84e-07!5;UBERON:0007123!3.84e-07!5;UBERON:0003091!3.84e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.31e-21;1!UBERON:0007195;6.31e-21;1!UBERON:0001256;6.31e-21;1!UBERON:0001259;6.31e-21;1!UBERON:0001255;3.70e-11;2!UBERON:0006955;3.70e-11;2!UBERON:0004801;3.70e-11;2!UBERON:0001556;3.70e-11;2!UBERON:0001723;5.36e-08;3!UBERON:0001033;5.36e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.16e-21,1;UBERON:0001256,5.16e-21,1;UBERON:0001259,5.16e-21,1;UBERON:0007195,9.43e-21,1;UBERON:0006955,3.02e-11,2;UBERON:0004801,3.02e-11,2;UBERON:0001255,3.35e-11,2;UBERON:0001556,3.35e-11,2;UBERON:0001723,4.84e-08,3;UBERON:0001033,4.84e-08,3;UBERON:0010056,4.84e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24803506515239,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.14851441245126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,2.3365771298305,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,1.65412492502765,0,0,0.0967563312890851,0.292357268344742,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0.320635281006135,0,0.19980960958213,0,0,0,0.432164393964449,0.621262677827163,0,0.67952103036807,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.353909170043221,0.183428598521679,2.65709032145778,0,0,0,0,0,0,0,0.655087670040387,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,1.38385556638657,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr2:191472552..191472556,- | |||
}} |
Revision as of 15:42, 12 September 2013
Short description: | p@chr2:191472552..191472556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:191472552..191472556, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.16e-21 | 1 |
lower urinary tract cell | 5.16e-21 | 1 |
mucus secreting cell | 6.31e-21 | 1 |
epithelial cell of cervix | 3.02e-11 | 2 |
seromucus secreting cell | 3.70e-11 | 2 |
squamous epithelial cell | 4.56e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.16e-21 | 1 |
wall of urinary bladder | 5.16e-21 | 1 |
mucosa of urinary bladder | 5.16e-21 | 1 |
stroma of bone marrow | 9.43e-21 | 1 |
uterine epithelium | 3.02e-11 | 2 |
cervix epithelium | 3.02e-11 | 2 |
urinary bladder | 3.35e-11 | 2 |
lower urinary tract | 3.35e-11 | 2 |
tongue | 4.84e-08 | 3 |
gustatory system | 4.84e-08 | 3 |
future tongue | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.98e-23 | 14 |
mucinous adenocarcinoma | 6.31e-21 | 1 |
carcinoma | 5.60e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.