FFCP PHASE1:Hg19::chr2:113956482..113956539,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19096 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=347bp_to_ENST00000464559_5end | |||
|description=CAGE_peak_3_at_PSD4_5end | |||
|id=chr2:113956482..113956539,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-27!254;CL:0000223!2.25e-15!59;CL:0002076!3.41e-13!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.57e-12;42!CL:0002251;4.19e-08;20!CL:0002368;4.01e-07;13 | |||
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|ontology_enrichment_development_v019=CL:0000223;9.21e-11;58!UBERON:0006595;5.92e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.52e-17!106;DOID:0050687!1.37e-13!143;DOID:299!4.43e-09!25;DOID:120!2.17e-08!27;DOID:193!3.72e-08!29;DOID:1749!4.76e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;5.49e-09;25!DOID:120;2.03e-08;27!DOID:1749;2.13e-08;14!DOID:193;2.49e-07;29 | |||
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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,1.47440361900905,11.1648186875588,10.9220686065086,3.16520373874144,2.84662611808107,3.64537113300707,0,0.602694528023977,0,0.487932798790507,6.77165819422333,7.34402488479311,2.5076377718247,0.85870796139317,2.32686522623903,0.627713197974014,0,0,0,0,0,0.77408061658038,9.19421224478927,12.04823675113,6.65557218300218,0,0,0,0,0,0,0.671746422719773,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,1.62700325833979,2.46700732813095,5.57471467611186,2.8769239232215,2.0492856522328,1.41889337933151,1.37898272294647,4.51839278508678,4.06279459783025,0.564727018627814,0.818718450173537,1.79778787556068,0.612167784741805,1.28371610830437,1.27867425159808,0.989553900560148,0.398927315243264,1.27867425159808,0.870627715885752,1.13477044938228,3.11411124497787,3.01498398308092,3.12889751052121,4.34377689410233,0,0.736555271975129,2.84816148696796,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,3.40644409211845,6.52290238432068,6.43015252641436,5.00658278450818,1.57174890597255,8.74308691902101,12.2358866118862,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,1.22031028774085,0,0,0,0,0.225222960966644,0,0,0,0,0,6.54141078213801,0,0,0.794455084879313,0.286836620748814,0.709336764396714,0.560677600142307,0,0,0.622422070799533,0.269421344139376,0.163461903113459,2.27036141467397,3.45705554687999,0.234321431833797,1.24864030732128,0,0.448346041655403,0.352303495931295,0.323745888736263,0.140450806702248,0.204154171254893,1.10550885580591,0.619954687054593,0,0,0.910161361938026,0.718618141816238,0.336672227908132,1.37630371859161,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0.423863802319124,0,0.412210116953756,1.03056216018252,0.744467425326359,0,0.194874010322397,0.504867548488229,0.460249493211497,0.323292113637624,0.355009592516614,0,1.3564847384839,8.88999924551165,6.2731607735892,9.17774705244812,0.365921118388786,0.132529768321485,0.580969714347592,0.207322110030741,0.504641701751257,0,7.8224766164908,4.5026865673502,0,0,0,5.91534000199219,6.23763353288976,3.85617647813571,6.50734439121124,6.10062443458737,4.98268300133303,4.1797705529651,3.72820783738158,3.46272441251751,0.738155454624648,0,0,0,20.2808055714929,26.5363348502959,12.4065880403095,0,3.07471096357784,4.63233087806019,5.1582634142054,10.1161577931858,9.75131032392819,4.90718759340207,0,2.07986957055916,2.88662684050547,3.94163376915261,1.29149563659404,0.433099343283221,0,0,5.53143078571493,5.15091697256924,0.246217006087397,0.234004265139238,0.445893486866185,5.62403003920662,3.35964256397719,6.80520466763455,3.58234090811393,2.61570544662566,14.568541808278,0,0,0.829312462163088,0,0.75745460055828,0.063497894292169,0.381988425558278,2.34434894420094,1.71072446022705,0.411309970813294,0.600686115687835,0.285826432630578,3.1396703616701,0.43596006883328,1.1734125731352,0.646358578788889,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,2.1100756394171,3.48613383440118,1.49959486773086,0,1.00451418286425,2.10833939483032,0.239624855491583,2.29723871668228,0,0.289562613335158,1.84928690295345,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0.670065061337395,0,0,0,0,1.10422342547226,0,1.89885516589815,0.415941723061614,0.892144943985809,0.473107245101804,0.234282829985426,0.902838299183157,0,1.03473071292505,0,0.921845842708516,0.781952530212746,8.2236486134351,0.686286847621712,0,0,0,50.3191768600791,3.32870879020994,10.8860505598685,0,0.460385919864187,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0.710246901252508,0.164254312027618,0,0.116210378459959,0.966875596732978,3.40860999515584,3.49907757956406,0.229628896329213,0,0.131124414959424,2.25599806453706,1.46329140498388,0,5.84556898613043,1.47772280450026,0,0.340187410553031,0.215915916102139,0,2.98041081298238,4.51520796469368,1.01950509218015,2.49322802678617,0.895499018888713,0,0,0.512900250232778,0.656029291399411,0,7.31591182698828,0.0915694648183434,0.247528499761764,1.72279661398852,3.90036147621913,0,0.676695028044854,0.308097234229289,0.307007349452259,0,0.429680979473094,0.580066775656914,0.340906509664404,0.0890320356467374,1.81813406897076,4.99694175149276,3.06270509987002,4.046311234222,0,0.31481234683064,0,0,0.532306030317022,0,0.55597265731176,0.143124886741991,4.46590043231601,1.89827654831236,0.571890581771475,1.27948895655667,0,0.636406495851874,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,0,0,0.731140468893853,0,0,0,0,1.65409603063837,0,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0,0.294747123039363,0,0,0.844430541190656,3.95153871551882,2.27683904259429,0.349934720244983,3.46399605811843,6.03272047982209,4.3556393944529,6.68420985515132,3.44404298136984,6.73885902670502,3.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| |||
|short_description=p3@PSD4 | |||
}} |
Revision as of 13:08, 12 September 2013
Short description: | p3@PSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PSD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 347bp_to_ENST00000464559_5end |
EntrezGene: | PSD4 |
HGNC: | 19096 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.36e-30 | 253 |
endodermal cell | 3.37e-19 | 58 |
endo-epithelial cell | 4.06e-17 | 42 |
epithelial cell of alimentary canal | 2.50e-08 | 20 |
respiratory epithelial cell | 5.23e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.88e-21 | 160 |
endoderm | 7.88e-21 | 160 |
presumptive endoderm | 7.88e-21 | 160 |
digestive system | 6.38e-16 | 145 |
digestive tract | 6.38e-16 | 145 |
primitive gut | 6.38e-16 | 145 |
subdivision of digestive tract | 6.20e-15 | 118 |
foregut | 1.95e-13 | 87 |
respiratory system | 1.31e-11 | 74 |
primordium | 5.76e-10 | 160 |
female organism | 6.69e-10 | 41 |
trunk region element | 1.34e-09 | 101 |
extraembryonic membrane | 4.94e-09 | 14 |
membranous layer | 4.94e-09 | 14 |
respiratory tract | 1.05e-08 | 54 |
respiratory primordium | 1.45e-08 | 38 |
endoderm of foregut | 1.45e-08 | 38 |
female reproductive organ | 2.09e-08 | 37 |
female reproductive system | 2.09e-08 | 37 |
internal genitalia | 3.70e-08 | 25 |
embryo | 1.20e-07 | 592 |
segment of respiratory tract | 1.84e-07 | 47 |
developing anatomical structure | 2.37e-07 | 581 |
reproductive organ | 5.74e-07 | 48 |
exocrine gland | 7.72e-07 | 31 |
exocrine system | 7.72e-07 | 31 |
endo-epithelium | 7.78e-07 | 82 |
oral opening | 8.72e-07 | 22 |
embryonic uterus | 9.20e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.09e-19 | 106 |
cell type cancer | 2.71e-13 | 143 |
adenocarcinoma | 3.56e-09 | 25 |
squamous cell carcinoma | 1.16e-08 | 14 |
female reproductive organ cancer | 2.51e-08 | 27 |
reproductive organ cancer | 2.99e-07 | 29 |
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