FFCP PHASE1:Hg19::chr2:113522177..113522228,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=150468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26877 | |||
|TSSclassifier=S | |||
|UniProt=F8WBE0,F5H0M5 | |||
|association_with_transcript=0bp_to_ENST00000435431,ENST00000481732,ENST00000541405_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_CKAP2L_5end | |||
|id=chr2:113522177..113522228,- | |||
|ontology_enrichment_celltype=CL:0000548!2.12e-12!679;CL:0000004!2.12e-12!679;CL:0000255!2.12e-12!679;CL:0000012!6.03e-12!682;CL:0000066!1.84e-10!254;CL:0002319!9.94e-08!25;CL:0000055!1.44e-07!180;CL:0000133!6.38e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.45e-08;25!CL:0000095;9.05e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.80e-11,253;CL:0002319,7.24e-08,25;CL:0000133,5.81e-07,59;CL:0000095,9.56e-07,17;CL:0000123,9.56e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.16e-58!235;DOID:14566!2.38e-57!239;DOID:0050687!1.90e-29!143;DOID:0050686!7.66e-27!137;DOID:305!2.83e-21!106;DOID:2531!3.52e-18!51;DOID:0060083!3.52e-18!51;DOID:1240!5.71e-15!39;DOID:8692!5.49e-11!31;DOID:7!8.74e-08!39;DOID:1115!4.67e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.63e-12;39!DOID:2531;1.21e-11;51!DOID:0060083;1.21e-11;51!DOID:8692;5.61e-11;31!DOID:0050687;7.79e-08;143!DOID:14566;4.47e-07;239!DOID:0050686;4.93e-07;137!DOID:1115;6.11e-07;20!DOID:305;7.89e-07;106!DOID:162;9.93e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.95e-58,235;DOID:14566,4.25e-57,239;DOID:0050687,2.65e-29,143;DOID:0050686,1.88e-26,137;DOID:305,3.37e-21,106;DOID:2531,1.50e-18,51;DOID:0060083,1.50e-18,51;DOID:1240,2.87e-15,39;DOID:8692,3.39e-11,31;DOID:7,4.96e-08,39;DOID:1115,6.31e-07,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,2.14100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0,2.94880723801811,0,6.55324116390517,5.53910654279752,1.23766352960047,0.662794751455832,2.6893005858071,0.602694528023977,2.19093027116212,4.87932798790507,4.92484232307152,3.4680117511523,2.19418305034661,40.0730381983479,31.3442433416905,32.2644583758643,33.8511387463424,37.3557681997253,43.0547973785825,0.786728553697808,0.383829398097213,0.77408061658038,8.27479102031034,4.819294700452,0.739508020333575,47.4873939557249,18.19766175839,8.80801318004542,1.10799081706375,4.21143339687298,2.82114131930607,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.256160706529101,0,0.689491361473237,0,2.70852973188684,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.641858054152187,0.639337125799041,0,0.398927315243264,0,0.580418477257168,0.56738522469114,0,0,0,1.08594422352558,1.21079900526674,1.47311054395026,0.316462387440884,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0,13.695972408304,0.196709770113833,0.786021525498329,0.616804496998528,2.84217042164153,0,0,0,10.6954038609767,0.294605907474837,0.443067789167242,0.812411591295047,10.247305578054,11.9654599755088,13.3194702728978,11.6067007470056,19.1270036585135,0,0,0,22.208631168723,0.383220493601921,0,0.253019692019503,1.27426165729639,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0.403213486449465,1.06976078313403,0.144824403882799,2.43806866313962,8.71911117614727,6.26526553033299,34.6981586289184,1.50401373190767,4.63508860674636,16.7010048880731,2.43317435151318,25.6189354514624,10.4212816807405,11.6820264971858,3.07800827419625,1.09288586487763,7.78647329847302,0,0,0,0,0,0,5.16782259153433,4.30117297553062,1.04142150482278,1.13061588384802,2.93649605346934,7.42818713238182,6.89683389571475,1.55050055501597,4.62496141492723,6.35969164252873,1.61131726843659,0,2.68468263302986,6.98559852657151,2.43042584364528,22.7714307124403,25.8208778520095,30.742934171947,3.06633274931766,1.89853131913626,3.66403487860815,1.31780417436063,0,0.436094052142534,0.993943903390637,17.3483800980474,0.926864265692532,14.6286676581895,34.0481646910423,6.16745360156538,2.1349799145941,5.42668606517752,11.8260193451911,9.56445771694785,20.7596616954093,1.21085942115945,2.88087962239999,4.68642863667593,1.87296046098192,4.56377457235559,3.13842229158782,28.5365831704349,21.5291016009615,27.8092597270452,7.96201267894084,33.1652656741773,3.82305390350332,4.75201142912821,2.71993622206413,0,0.718618141816238,30.63717273964,41.914704157108,29.0917321258392,14.9252391099485,9.80760946556863,5.40857012063748,25.6356733941648,31.9313551526174,1.49490172172997,5.51022943014861,20.106103437655,12.7785136255664,5.41045134095821,2.23340227597908,33.586490116012,15.3950468154694,20.9520032622615,2.76149695926898,1.93975268182574,13.1353549231147,19.4451549579346,11.8692414617341,5.7978255948989,13.0918137883601,9.46455164783713,21.10145116042,19.6144057115798,17.4290914304278,18.4516677927359,19.681026368299,9.85438869504741,4.69348596989448,1.92972281457866,5.52539685409922,0,1.44375896333917,22.3599852075305,17.8699771482788,19.2808823906786,21.1764427646196,16.3409583069305,19.693461386221,15.7752630547392,14.1279454890249,15.0051391209092,2.95262181849859,2.80483547606892,0.8231480226628,0,0,0,0,31.3438800584402,12.1758554157682,8.23525489432923,3.95101027471052,1.1240175325762,27.3438804959636,19.7213388187668,3.25808305310325,3.11980435583874,7.21656710126366,9.97001482785661,1.76113041353732,3.17606185074362,1.85194205030644,6.27838702374174,8.69224837755203,3.43394464837949,1.47730203652438,6.78612368903789,15.4576408780277,1.87467667973554,5.03946384596579,10.3495820986942,51.2274749860292,51.1515731784573,22.6195780707475,43.354364934843,15.8487181223807,1.4512968087854,0.144119953416961,0.37872730027914,21.9702714250905,4.58386110669933,2.34434894420094,1.71072446022705,10.796886733849,12.6144084294445,3.71574362419752,8.63409349459278,3.48768055066624,45.1030457798843,0.646358578788889,0,21.1325688139,1.86156681609409,7.28052058379563,7.45901385360212,2.83698264046557,7.45982101245078,4.57529579706072,0,6.58592269424615,26.7103671120863,2.84313558994037,26.1344118068032,0,0,1.99945982364114,1.2162378064119,1.00451418286425,0,7.18874566474748,2.29723871668228,34.2328572097724,6.80472141337622,6.98619496671304,14.3248770591916,75.4333019076439,0.788123040807709,0.215627574859517,0.77005821767849,25.1553677980239,23.4251736943719,15.4657762555539,10.553524716064,17.2243462946354,0,0,0.414415513436035,0.613457458595699,1.00034104211935,0.813795071099207,1.66376689224646,8.74302045106093,3.6271555457805,9.01988895443892,0,0,3.10419213877515,27.2332495399529,9.40282759562686,21.4602527736165,0.195801157462741,0.343143423810856,0.413536052245775,0.215714200818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| |||
|short_description=p1@CKAP2L | |||
}} |
Revision as of 13:00, 12 September 2013
Short description: | p1@CKAP2L |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CKAP2L_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000435431, ENST00000481732, ENST00000541405_5end |
EntrezGene: | CKAP2L |
HGNC: | 26877 |
UniProt: | F8WBE0F5H0M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.80e-11 | 253 |
neural cell | 7.24e-08 | 25 |
neurectodermal cell | 5.81e-07 | 59 |
neuron associated cell | 9.56e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 9.56e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.95e-58 | 235 |
disease of cellular proliferation | 4.25e-57 | 239 |
cell type cancer | 2.65e-29 | 143 |
organ system cancer | 1.88e-26 | 137 |
carcinoma | 3.37e-21 | 106 |
hematologic cancer | 1.50e-18 | 51 |
immune system cancer | 1.50e-18 | 51 |
leukemia | 2.87e-15 | 39 |
myeloid leukemia | 3.39e-11 | 31 |
disease of anatomical entity | 4.96e-08 | 39 |
sarcoma | 6.31e-07 | 20 |
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