FFCP PHASE1:Hg19::chr2:100629145..100629157,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:100629145..100629157,-|id=chr2:100629145..100629157,-|ontology_enrichment_celltype=CL:0000055!2.40e-26!180;CL:0000057!8.87e-25!75;CL:0002620!1.45e-18!23;CL:0000594!1.20e-09!3;CL:0002582!5.53e-09!3;CL:0002504!1.02e-08!3;CL:1000279!1.02e-08!3;CL:1000280!1.02e-08!3;CL:0002551!1.63e-08!6;CL:0000188!2.40e-08!9;CL:0002556!6.62e-08!6;CL:0000048!1.77e-07!430;CL:0000723!3.31e-07!436;CL:0002602!4.00e-07!2;CL:0000034!7.42e-07!444|ontology_enrichment_celltype_v019=CL:0002569;3.08e-12;6!CL:0002602;1.51e-09;2!CL:0000188;2.51e-08;9!CL:0000081;4.43e-07;11!CL:0002573;8.86e-07;2!CL:0002582;8.86e-07;3!CL:0000594;8.86e-07;3|ontology_enrichment_celltype_v019_2=CL:0002569,2.91e-12,6;CL:0002602,1.71e-09,2;CL:0000188,2.75e-08,9;CL:0000081,4.30e-07,11;CL:0002573,8.62e-07,2|ontology_enrichment_development_v019=UBERON:0003099;9.48e-18;1!UBERON:0003852;9.48e-18;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4231;1.51e-09;2!DOID:3193;1.51e-09;2!DOID:962;1.51e-09;2!DOID:1907;1.51e-09;2!DOID:1192;8.86e-07;3|ontology_enrichment_disease_v019_2=DOID:4231,1.22e-09,2;DOID:1907,1.22e-09,2;DOID:3193,1.44e-09,2;DOID:962,1.44e-09,2;DOID:1192,8.62e-07,3|ontology_enrichment_uberon=UBERON:0003102!1.93e-12!95;UBERON:0000075!2.36e-10!13;UBERON:0005944!2.36e-10!13;UBERON:0004288!2.36e-10!13;UBERON:0003089!2.36e-10!13;UBERON:0000914!2.81e-10!83;UBERON:0002329!2.81e-10!83;UBERON:0003077!2.81e-10!83;UBERON:0003059!2.81e-10!83;UBERON:0007282!2.81e-10!83;UBERON:0009618!2.81e-10!83;UBERON:0007285!2.81e-10!83;UBERON:0002097!2.24e-09!40;UBERON:0002199!2.43e-09!45;UBERON:0002416!2.43e-09!45;UBERON:0002384!1.65e-08!375;UBERON:0001758!6.62e-08!6;UBERON:0003672!6.62e-08!6;UBERON:0009568!4.00e-07!2;UBERON:0002216!4.00e-07!2;UBERON:0002209!4.00e-07!2;UBERON:0002213!4.00e-07!2;UBERON:0004267!4.00e-07!2;UBERON:0006444!4.00e-07!2;UBERON:0001995!4.00e-07!2;UBERON:0004715!4.00e-07!2;UBERON:0001468!4.00e-07!2;UBERON:0001130!4.00e-07!2;UBERON:0001066!4.00e-07!2|ontology_enrichment_uberon_v019=UBERON:0003104;4.12e-22;7!UBERON:0009142;4.12e-22;7!UBERON:0007195;3.16e-18;1!UBERON:0005705;9.48e-18;1!UBERON:0008193;9.48e-18;1!UBERON:0010912;9.48e-18;1!UBERON:0002514;9.48e-18;1!UBERON:0003457;9.48e-18;1!UBERON:0008907;9.48e-18;1!UBERON:0008001;9.48e-18;1!UBERON:0007213;9.48e-18;1!UBERON:0009891;9.48e-18;1!UBERON:0007914;9.48e-18;1!UBERON:0007375;9.48e-18;1!UBERON:0003323;9.48e-18;1!UBERON:0010258;9.48e-18;1!UBERON:0005253;9.48e-18;1!UBERON:0007842;9.48e-18;1!UBERON:0002397;9.48e-18;1!UBERON:0003113;9.48e-18;1!UBERON:0003277;9.48e-18;1!UBERON:0001709;9.48e-18;1!UBERON:0002244;9.48e-18;1!UBERON:0005620;9.48e-18;1!UBERON:0010364;9.48e-18;1!UBERON:0004288;9.48e-18;1!UBERON:0003422;3.08e-12;6!UBERON:0006444;1.51e-09;2!UBERON:0001995;1.51e-09;2!UBERON:0004715;1.51e-09;2!UBERON:0004089;1.51e-09;2!UBERON:0002331;1.05e-07;10!UBERON:0002418;8.86e-07;3!UBERON:0004755;8.86e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.75e-18,1;UBERON:0005705,1.03e-17,1;UBERON:0008193,1.03e-17,1;UBERON:0010912,1.03e-17,1;UBERON:0002514,1.03e-17,1;UBERON:0003457,1.03e-17,1;UBERON:0008907,1.03e-17,1;UBERON:0008001,1.03e-17,1;UBERON:0007213,1.03e-17,1;UBERON:0009891,1.03e-17,1;UBERON:0007914,1.03e-17,1;UBERON:0009292,1.03e-17,1;UBERON:0003099,1.03e-17,1;UBERON:0007375,1.03e-17,1;UBERON:0003323,1.03e-17,1;UBERON:0010258,1.03e-17,1;UBERON:0007842,1.03e-17,1;UBERON:0009494,1.03e-17,1;UBERON:0010042,1.03e-17,1;UBERON:0010045,1.03e-17,1;UBERON:0010259,1.03e-17,1;UBERON:0010359,1.03e-17,1;UBERON:0009526,1.03e-17,1;UBERON:0002397,1.03e-17,1;UBERON:0003113,1.03e-17,1;UBERON:0003277,1.03e-17,1;UBERON:0001709,1.03e-17,1;UBERON:0004066,1.03e-17,1;UBERON:0002244,1.03e-17,1;UBERON:0005620,1.03e-17,1;UBERON:0004362,1.03e-17,1;UBERON:0010364,1.03e-17,1;UBERON:0010046,1.03e-17,1;UBERON:0005868,1.03e-17,1;UBERON:0007238,1.03e-17,1;UBERON:0004288,1.03e-17,1;UBERON:0004068,1.03e-17,1;UBERON:0010334,1.03e-17,1;UBERON:0003852,1.03e-17,1;UBERON:0010253,1.03e-17,1;UBERON:0003422,2.91e-12,6;UBERON:0005253,1.57e-09,2;UBERON:0004089,1.57e-09,2;UBERON:0006444,1.71e-09,2;UBERON:0001995,1.71e-09,2;UBERON:0004715,1.71e-09,2;UBERON:0002331,1.02e-07,10;UBERON:0000358,1.02e-07,10;UBERON:0000307,1.02e-07,10;UBERON:0000091,1.02e-07,10;UBERON:0000087,1.02e-07,10;UBERON:0007010,1.02e-07,10;UBERON:0007806,1.02e-07,10;UBERON:0008780,1.02e-07,10;UBERON:0005728,1.02e-07,10;UBERON:0002418,9.64e-07,3;UBERON:0004755,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:100629145..100629157,- | |||
|id=chr2:100629145..100629157,- | |||
|ontology_enrichment_celltype=CL:0000055!2.40e-26!180;CL:0000057!8.87e-25!75;CL:0002620!1.45e-18!23;CL:0000594!1.20e-09!3;CL:0002582!5.53e-09!3;CL:0002504!1.02e-08!3;CL:1000279!1.02e-08!3;CL:1000280!1.02e-08!3;CL:0002551!1.63e-08!6;CL:0000188!2.40e-08!9;CL:0002556!6.62e-08!6;CL:0000048!1.77e-07!430;CL:0000723!3.31e-07!436;CL:0002602!4.00e-07!2;CL:0000034!7.42e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002569;3.08e-12;6!CL:0002602;1.51e-09;2!CL:0000188;2.51e-08;9!CL:0000081;4.43e-07;11!CL:0002573;8.86e-07;2!CL:0002582;8.86e-07;3!CL:0000594;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,2.91e-12,6;CL:0002602,1.71e-09,2;CL:0000188,2.75e-08,9;CL:0000081,4.30e-07,11;CL:0002573,8.62e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.48e-18;1!UBERON:0003852;9.48e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;1.51e-09;2!DOID:3193;1.51e-09;2!DOID:962;1.51e-09;2!DOID:1907;1.51e-09;2!DOID:1192;8.86e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.22e-09,2;DOID:1907,1.22e-09,2;DOID:3193,1.44e-09,2;DOID:962,1.44e-09,2;DOID:1192,8.62e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.93e-12!95;UBERON:0000075!2.36e-10!13;UBERON:0005944!2.36e-10!13;UBERON:0004288!2.36e-10!13;UBERON:0003089!2.36e-10!13;UBERON:0000914!2.81e-10!83;UBERON:0002329!2.81e-10!83;UBERON:0003077!2.81e-10!83;UBERON:0003059!2.81e-10!83;UBERON:0007282!2.81e-10!83;UBERON:0009618!2.81e-10!83;UBERON:0007285!2.81e-10!83;UBERON:0002097!2.24e-09!40;UBERON:0002199!2.43e-09!45;UBERON:0002416!2.43e-09!45;UBERON:0002384!1.65e-08!375;UBERON:0001758!6.62e-08!6;UBERON:0003672!6.62e-08!6;UBERON:0009568!4.00e-07!2;UBERON:0002216!4.00e-07!2;UBERON:0002209!4.00e-07!2;UBERON:0002213!4.00e-07!2;UBERON:0004267!4.00e-07!2;UBERON:0006444!4.00e-07!2;UBERON:0001995!4.00e-07!2;UBERON:0004715!4.00e-07!2;UBERON:0001468!4.00e-07!2;UBERON:0001130!4.00e-07!2;UBERON:0001066!4.00e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;4.12e-22;7!UBERON:0009142;4.12e-22;7!UBERON:0007195;3.16e-18;1!UBERON:0005705;9.48e-18;1!UBERON:0008193;9.48e-18;1!UBERON:0010912;9.48e-18;1!UBERON:0002514;9.48e-18;1!UBERON:0003457;9.48e-18;1!UBERON:0008907;9.48e-18;1!UBERON:0008001;9.48e-18;1!UBERON:0007213;9.48e-18;1!UBERON:0009891;9.48e-18;1!UBERON:0007914;9.48e-18;1!UBERON:0007375;9.48e-18;1!UBERON:0003323;9.48e-18;1!UBERON:0010258;9.48e-18;1!UBERON:0005253;9.48e-18;1!UBERON:0007842;9.48e-18;1!UBERON:0002397;9.48e-18;1!UBERON:0003113;9.48e-18;1!UBERON:0003277;9.48e-18;1!UBERON:0001709;9.48e-18;1!UBERON:0002244;9.48e-18;1!UBERON:0005620;9.48e-18;1!UBERON:0010364;9.48e-18;1!UBERON:0004288;9.48e-18;1!UBERON:0003422;3.08e-12;6!UBERON:0006444;1.51e-09;2!UBERON:0001995;1.51e-09;2!UBERON:0004715;1.51e-09;2!UBERON:0004089;1.51e-09;2!UBERON:0002331;1.05e-07;10!UBERON:0002418;8.86e-07;3!UBERON:0004755;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.75e-18,1;UBERON:0005705,1.03e-17,1;UBERON:0008193,1.03e-17,1;UBERON:0010912,1.03e-17,1;UBERON:0002514,1.03e-17,1;UBERON:0003457,1.03e-17,1;UBERON:0008907,1.03e-17,1;UBERON:0008001,1.03e-17,1;UBERON:0007213,1.03e-17,1;UBERON:0009891,1.03e-17,1;UBERON:0007914,1.03e-17,1;UBERON:0009292,1.03e-17,1;UBERON:0003099,1.03e-17,1;UBERON:0007375,1.03e-17,1;UBERON:0003323,1.03e-17,1;UBERON:0010258,1.03e-17,1;UBERON:0007842,1.03e-17,1;UBERON:0009494,1.03e-17,1;UBERON:0010042,1.03e-17,1;UBERON:0010045,1.03e-17,1;UBERON:0010259,1.03e-17,1;UBERON:0010359,1.03e-17,1;UBERON:0009526,1.03e-17,1;UBERON:0002397,1.03e-17,1;UBERON:0003113,1.03e-17,1;UBERON:0003277,1.03e-17,1;UBERON:0001709,1.03e-17,1;UBERON:0004066,1.03e-17,1;UBERON:0002244,1.03e-17,1;UBERON:0005620,1.03e-17,1;UBERON:0004362,1.03e-17,1;UBERON:0010364,1.03e-17,1;UBERON:0010046,1.03e-17,1;UBERON:0005868,1.03e-17,1;UBERON:0007238,1.03e-17,1;UBERON:0004288,1.03e-17,1;UBERON:0004068,1.03e-17,1;UBERON:0010334,1.03e-17,1;UBERON:0003852,1.03e-17,1;UBERON:0010253,1.03e-17,1;UBERON:0003422,2.91e-12,6;UBERON:0005253,1.57e-09,2;UBERON:0004089,1.57e-09,2;UBERON:0006444,1.71e-09,2;UBERON:0001995,1.71e-09,2;UBERON:0004715,1.71e-09,2;UBERON:0002331,1.02e-07,10;UBERON:0000358,1.02e-07,10;UBERON:0000307,1.02e-07,10;UBERON:0000091,1.02e-07,10;UBERON:0000087,1.02e-07,10;UBERON:0007010,1.02e-07,10;UBERON:0007806,1.02e-07,10;UBERON:0008780,1.02e-07,10;UBERON:0005728,1.02e-07,10;UBERON:0002418,9.64e-07,3;UBERON:0004755,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0.624320153660641,0.570471821544449,0,0,1.61872944368132,0.561803226808994,0.204154171254893,0.859840221182376,0.206651562351531,0,0,0.910161361938026,0,0,0.625592599359821,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0.355009592516614,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0.977424915930974,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59437283237374,3.44585807502342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813795071099207,0,0.178428988797162,0,0,0.300946099727719,0,0,0.664225598535437,1.65932251687533,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,1.03850885836724,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32009723901093,0.616194468458578,0,0,1.07420244868274,0.290033387828457,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,1.41070377476274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:100629145..100629157,- | |||
}} |
Revision as of 12:38, 12 September 2013
Short description: | p@chr2:100629145..100629157, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:100629145..100629157, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 2.91e-12 | 6 |
annulus pulposus cell | 1.71e-09 | 2 |
cell of skeletal muscle | 2.75e-08 | 9 |
blood cell | 4.30e-07 | 11 |
Schwann cell | 8.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.22e-09 | 2 |
malignant fibroxanthoma | 1.22e-09 | 2 |
peripheral nerve sheath neoplasm | 1.44e-09 | 2 |
neurofibroma | 1.44e-09 | 2 |
peripheral nervous system neoplasm | 8.62e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.