FFCP PHASE1:Hg19::chr22:50732416..50732432,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr22:50732416..50732432,-|id=chr22:50732416..50732432,-|ontology_enrichment_celltype=CL:0000066!8.66e-12!254;CL:0002586!3.26e-08!3;CL:0002231!2.70e-07!3|ontology_enrichment_celltype_v019=CL:0002586;2.50e-14;3!CL:0002563;2.36e-11;4!CL:0000313;3.45e-11;1!CL:0000149;5.58e-11;4!CL:0002188;5.83e-09;5!CL:0000182;6.04e-08;12|ontology_enrichment_celltype_v019_2=CL:0002586,2.12e-14,3;CL:0000313,1.97e-11,1;CL:0002563,2.30e-11,4;CL:0000149,4.92e-11,4;CL:0002188,7.26e-09,5;CL:0000182,6.12e-08,12;CL:0000066,1.10e-07,253|ontology_enrichment_development_v019=UBERON:0006242;3.45e-11;1!UBERON:0004161;1.27e-08;11!UBERON:0003104;1.18e-07;31!UBERON:0009497;2.27e-07;13|ontology_enrichment_disease=DOID:305!3.61e-08!106;DOID:299!2.28e-07!25|ontology_enrichment_disease_v019=DOID:3111;3.45e-11;1!DOID:2152;3.45e-11;1!DOID:3603;3.45e-11;1!DOID:299;5.38e-10;25|ontology_enrichment_disease_v019_2=DOID:2152,1.97e-11,1;DOID:3111,2.96e-11,1;DOID:3603,2.96e-11,1;DOID:299,4.44e-10,25|ontology_enrichment_uberon=UBERON:0002294!1.26e-10!7;UBERON:0001173!1.26e-10!7;UBERON:0004912!1.26e-10!7;UBERON:0005172!3.74e-10!55;UBERON:0005173!3.74e-10!55;UBERON:0004921!1.52e-09!129;UBERON:0004185!1.52e-09!129;UBERON:0003929!6.35e-09!54;UBERON:0002394!9.04e-09!4;UBERON:0003928!9.04e-09!4;UBERON:0009497!1.05e-08!25;UBERON:0000015!1.05e-08!25;UBERON:0002423!1.05e-08!25;UBERON:0006235!1.05e-08!25;UBERON:0004161!1.05e-08!25;UBERON:0002417!1.12e-08!61;UBERON:0000916!1.12e-08!61;UBERON:0001007!1.38e-08!155;UBERON:0001555!1.38e-08!155;UBERON:0007026!1.38e-08!155;UBERON:0000466!1.52e-08!126;UBERON:0001781!3.26e-08!3;UBERON:0001782!3.26e-08!3;UBERON:0005424!3.26e-08!3;UBERON:0000058!3.34e-08!26;UBERON:0000966!3.56e-08!5;UBERON:0005388!3.56e-08!5;UBERON:0001802!3.56e-08!5;UBERON:0004119!9.06e-08!169;UBERON:0000925!9.06e-08!169;UBERON:0006595!9.06e-08!169;UBERON:0003064!2.78e-07!37;UBERON:0007499!3.86e-07!25;UBERON:0000077!5.18e-07!130;UBERON:0008835!8.35e-07!22;UBERON:0003894!8.35e-07!22;UBERON:0009856!8.74e-07!26|ontology_enrichment_uberon_v019=UBERON:0001781;2.50e-14;3!UBERON:0001782;2.50e-14;3!UBERON:0001242;2.36e-11;4!UBERON:0001262;2.36e-11;4!UBERON:0004786;2.36e-11;4!UBERON:0004808;2.36e-11;4!UBERON:0001277;2.36e-11;4!UBERON:0004911;3.45e-11;1!UBERON:0000966;5.83e-09;5!UBERON:0005388;5.83e-09;5!UBERON:0001802;5.83e-09;5!UBERON:0000485;7.56e-07;7!UBERON:0003929;7.56e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.12e-14,3;UBERON:0005424,2.12e-14,3;UBERON:0004911,1.97e-11,1;UBERON:0001242,2.30e-11,4;UBERON:0001262,2.30e-11,4;UBERON:0004786,2.30e-11,4;UBERON:0004808,2.30e-11,4;UBERON:0001277,2.30e-11,4;UBERON:0001781,4.92e-11,4;UBERON:0003929,1.90e-08,54;UBERON:0005172,2.89e-08,54;UBERON:0005173,2.89e-08,54;UBERON:0000966,1.21e-07,6;UBERON:0005388,1.21e-07,6;UBERON:0001802,1.21e-07,6;UBERON:0002417,2.28e-07,60;UBERON:0000916,2.28e-07,60|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,3.68965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0.433099343283221,0,0.951270761172991,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38406458856542,0.200506470303285,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,1.13733384070897,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0,0,0,0.512900250232778,1.31205858279882,2.27764876265012,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,2.01546198283421,0.102268682502155,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44849212238722,5.23006364305581,0,0,0.619202951523374,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.097992397414377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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr22:50732416..50732432,- | |||
|id=chr22:50732416..50732432,- | |||
|ontology_enrichment_celltype=CL:0000066!8.66e-12!254;CL:0002586!3.26e-08!3;CL:0002231!2.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.50e-14;3!CL:0002563;2.36e-11;4!CL:0000313;3.45e-11;1!CL:0000149;5.58e-11;4!CL:0002188;5.83e-09;5!CL:0000182;6.04e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.12e-14,3;CL:0000313,1.97e-11,1;CL:0002563,2.30e-11,4;CL:0000149,4.92e-11,4;CL:0002188,7.26e-09,5;CL:0000182,6.12e-08,12;CL:0000066,1.10e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.45e-11;1!UBERON:0004161;1.27e-08;11!UBERON:0003104;1.18e-07;31!UBERON:0009497;2.27e-07;13 | |||
|ontology_enrichment_disease=DOID:305!3.61e-08!106;DOID:299!2.28e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.45e-11;1!DOID:2152;3.45e-11;1!DOID:3603;3.45e-11;1!DOID:299;5.38e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.97e-11,1;DOID:3111,2.96e-11,1;DOID:3603,2.96e-11,1;DOID:299,4.44e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.26e-10!7;UBERON:0001173!1.26e-10!7;UBERON:0004912!1.26e-10!7;UBERON:0005172!3.74e-10!55;UBERON:0005173!3.74e-10!55;UBERON:0004921!1.52e-09!129;UBERON:0004185!1.52e-09!129;UBERON:0003929!6.35e-09!54;UBERON:0002394!9.04e-09!4;UBERON:0003928!9.04e-09!4;UBERON:0009497!1.05e-08!25;UBERON:0000015!1.05e-08!25;UBERON:0002423!1.05e-08!25;UBERON:0006235!1.05e-08!25;UBERON:0004161!1.05e-08!25;UBERON:0002417!1.12e-08!61;UBERON:0000916!1.12e-08!61;UBERON:0001007!1.38e-08!155;UBERON:0001555!1.38e-08!155;UBERON:0007026!1.38e-08!155;UBERON:0000466!1.52e-08!126;UBERON:0001781!3.26e-08!3;UBERON:0001782!3.26e-08!3;UBERON:0005424!3.26e-08!3;UBERON:0000058!3.34e-08!26;UBERON:0000966!3.56e-08!5;UBERON:0005388!3.56e-08!5;UBERON:0001802!3.56e-08!5;UBERON:0004119!9.06e-08!169;UBERON:0000925!9.06e-08!169;UBERON:0006595!9.06e-08!169;UBERON:0003064!2.78e-07!37;UBERON:0007499!3.86e-07!25;UBERON:0000077!5.18e-07!130;UBERON:0008835!8.35e-07!22;UBERON:0003894!8.35e-07!22;UBERON:0009856!8.74e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.50e-14;3!UBERON:0001782;2.50e-14;3!UBERON:0001242;2.36e-11;4!UBERON:0001262;2.36e-11;4!UBERON:0004786;2.36e-11;4!UBERON:0004808;2.36e-11;4!UBERON:0001277;2.36e-11;4!UBERON:0004911;3.45e-11;1!UBERON:0000966;5.83e-09;5!UBERON:0005388;5.83e-09;5!UBERON:0001802;5.83e-09;5!UBERON:0000485;7.56e-07;7!UBERON:0003929;7.56e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.12e-14,3;UBERON:0005424,2.12e-14,3;UBERON:0004911,1.97e-11,1;UBERON:0001242,2.30e-11,4;UBERON:0001262,2.30e-11,4;UBERON:0004786,2.30e-11,4;UBERON:0004808,2.30e-11,4;UBERON:0001277,2.30e-11,4;UBERON:0001781,4.92e-11,4;UBERON:0003929,1.90e-08,54;UBERON:0005172,2.89e-08,54;UBERON:0005173,2.89e-08,54;UBERON:0000966,1.21e-07,6;UBERON:0005388,1.21e-07,6;UBERON:0001802,1.21e-07,6;UBERON:0002417,2.28e-07,60;UBERON:0000916,2.28e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,3.68965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0.433099343283221,0,0.951270761172991,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38406458856542,0.200506470303285,0.0920809889358963,0,0,0,0,0,0.784349769176855,0,0,1.13733384070897,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,0,0,0,0,0.512900250232778,1.31205858279882,2.27764876265012,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846458889008016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,2.01546198283421,0.102268682502155,0,0,0.359473404589307,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44849212238722,5.23006364305581,0,0,0.619202951523374,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,1.49417096317547,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.10296455230113,0.988990300573997,1.61768505250044,0.295282444544246,0,0,0,0,0,0,0,0,0,0,1.26089131678717,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0.521988583930423,0,0,0,0,0.617602894321944,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78968690876468,0.098150233615243,2.68219434960993,0,0.205325613712494,0,0,0,0,0,0,0,0,0.694567422971502,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0.0673520530145875,0.358611026963382,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr22:50732416..50732432,- | |||
}} |
Revision as of 12:33, 12 September 2013
Short description: | p@chr22:50732416..50732432, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:50732416..50732432, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.12e-14 | 3 |
serous secreting cell | 1.97e-11 | 1 |
intestinal epithelial cell | 2.30e-11 | 4 |
visual pigment cell | 4.92e-11 | 4 |
glomerular endothelial cell | 7.26e-09 | 5 |
hepatocyte | 6.12e-08 | 12 |
epithelial cell | 1.10e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.12e-14 | 3 |
presumptive retinal pigmented epithelium | 2.12e-14 | 3 |
epithelium of female gonad | 1.97e-11 | 1 |
intestinal mucosa | 2.30e-11 | 4 |
wall of intestine | 2.30e-11 | 4 |
gastrointestinal system mucosa | 2.30e-11 | 4 |
gastrointestinal system epithelium | 2.30e-11 | 4 |
intestinal epithelium | 2.30e-11 | 4 |
layer of retina | 4.92e-11 | 4 |
gut epithelium | 1.90e-08 | 54 |
abdomen element | 2.89e-08 | 54 |
abdominal segment element | 2.89e-08 | 54 |
retina | 1.21e-07 | 6 |
photoreceptor array | 1.21e-07 | 6 |
posterior segment of eyeball | 1.21e-07 | 6 |
abdominal segment of trunk | 2.28e-07 | 60 |
abdomen | 2.28e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.97e-11 | 1 |
cystadenocarcinoma | 2.96e-11 | 1 |
mucinous cystadenocarcinoma | 2.96e-11 | 1 |
adenocarcinoma | 4.44e-10 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.